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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000199_pilon:468522..476494- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034393 ID=XLOC_034393|Name=XLOC_034393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7973bp|location=Sequence derived from alignment at sc0000199_pilon:468522..476494- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAACCACAATCGAAGAAACCAAGAGTTGGCCTAGAGTAAGTATA
CAGACTTACAAACTTGTGATTTTCTGCACGTTTTTCTCACGAAGAGACGC
ACGTCTTCGTTTTTAATTTGATTTTAAGTGAATAAAGTTTTTCATTTACT
AACAAGTTTTTAATTCTTCCAGGCAATTTGTACGTGTTTGTTTGTCTTAT
ATAGTTTTAGTACCGTCATTTTATATAAGATTTCCATTTGGTGCGACAAG
TACCATGAGATCGGGTAATTTGCGTCAGTGGAGGCTAACATACGGTAGAT
GTTATATCGGTCACCTTTTTTTATTTCCTATCTCTTATCCTATTTTTCTC
TTTTCTGACTGTCTGACGTTTTTTATTTTCTAACTACCTAAGTTTTGATC
CGTCAATGATATTTCATCCAATCAAATCATCGCACCGTATGGGGTTCGAA
CCCTTGCCAAAGATAAAGACCTTCGGTTCCGGAAGCCAGAGCACTCTATC
CACTGAGCCATTCGTTGCATGCCAAATTCCGCAATTTGAAAGAACTTATA
TCGAACGGACAAATCTCTTTATATAGATGAGACTCCCAACCCTACTGGTG
CCCCTATGAGGACCTTCAGTCCTTTATTGTGACTCTCGAGCTCCAACCCT
GACCCTAACTGATGATAACCGAACCCCCGTCTTCCAGGGTGACTTTAAGC
GATGCGCGGATGAGAAAATAAATAAGGTGACTTTTGGCCATCCGATCTAA
GAGCATCCCTAACATACATAGCCCTCAAATGAATGACCTGGCTGGTCATT
AAAATACAAAGTTAAATCAAAACAAAAATGGTAGACTAGAGCTGCGTAGT
TCATTTGTTTTGAAATTTTGCTGCTTTCATTGGTCAGTCATTTGATGGCT
ATGCAAGTTTCCCTGCAATGATGCAAGTTACCCGACTTCACGGTAGCTAG
TGTGGCAAGAATCTTAGTGCGGAAATGGGAATCTTATACAAAGCGACAGT
AAAGGTGAAGGTTATTTAGTATAGGAGACCAGACAACCAGCAAACAGTCA
GGGATACTTGCGAAAACATTACAATCTTAGCAATCAATAAGCATGAAAAT
TAACCTTAGGGGAGCCATCTAAACTCAAACTTGCCACTGAAAACGTTGAT
TGGACTATTTGGAGGTGGCTATTTATTCCTGCAGTCTAGACTTAAACTCC
CATATCAGGATTAGAAACTAGACTAAAACAAAAATTTTATTTTTTTATTG
TCTTAATCGAAATGGGGGGGGGGGGGGGTATGGAAAATTTTCTATAATGT
TTAGTTTTTTTGCACAAACCCCTGTAACTAAAGGCAAGCATATCAAAACG
TTTTAAACAGGTTCCGTGAGTGGTCCTAAATCCAACAGCCCTGCCTAAAC
CTGACCCCCCAAATAACTGCTATGAAAAAAAATCTATGTTTACAAAAATT
CCCTCTCCAAGTTGAACAATAAACTATTGCGAGAAATCTTAAAATAAAAC
ATCTAACAAGATGACTATAATGTCAAGATGTCAATTAATGTGATCAAAAG
TGTGAGTTGTAAAAATAATTACCTCTATTATTCTGAATCCGTTGCATCTT
GTTTAAAACGTTAACAATTTTGTAATAAAAAATTATGTTTTGTATAAGAA
GCAATTATTGTTATTTGGTTCAATTGGTTAAGTGTATCAAATCTCTCAGT
TTAGTTTCGACACTTTGATATTCTCATTGCGTCACAGCGAAAGGTTTGTT
TTTATTTTAGTTTGTACCTTAAGTGGATAAATTTTCGCGTGGACTTTTTT
TCGCGAATCGAAAATCGAAAATTTTCGCGTGGACTAAATTTCGCGAATCA
GCCTCTTTTTCACCTAATTTCTTTCATTTTCCTAGGGGTTTTGGCAAAAA
TCATAATTTTAAATTTTTCGCGTGGACAAAATTTCGCGAAAATGGCCAAA
ATACGCGAAAATCGCAAAAATTAATCCACGCGAAAATTTATCCACTTAAG
GTATCTTTGAAAGACCCCATTGGATTTAGGCAGGGCTGTCGGATTTAGGA
CCACTCACGGTTATACTCAGAAGCTTTTATTTATAACATAGTATGAAGCC
CCCTTTTTTTAAGGGGGGATCCAACTTTTCCAGAAAGTGCATTATAGGGG
GGATAGAAGATTTTCCAAATAAAATGGGAGGTTTGAGATTTTAGGAGGGC
CAAGTAAAAATAGGGGGATAACAACTTTTGGTCAAAATATCTATCATTTT
TATATTGATTTAGATATTTGGTGTGGGACAACTAAAAAACAAGTGTAGAT
AGCTAAATTTTCGCCTGCAGCGCCATGTTTAACTCTTTTTTCTTATAATC
TTTTGATACAAATTTCAATGTTTTTGGTTTTGAAAGACTGGTGGATTGCT
GCTAAAAATAGTGCGGATTCGAAATTTTTTTCAAATAGGGGGGATGAAAT
GGGGTCAGACCCCTCTGCACACTATGTATAAACATTTAAAAAAGACCAGA
CAGTTGTAATGACAGAATTAGACAAGGTATGTTGGCATTACACAAAGTTA
CGATATGTCTTGGCTCCCTTTTGAATTTTGCAGATGACCGTCTTTTTGGA
CTTATGGGAATTTCCGTGAAAAAGTTTAGAAATTACATCCATCATTTTTG
GACCTACCCCGGTGGGGTGAAGGTCCTATAAATTCACCTCTGTCCGTCCG
TCTGTCCGTTCTTTACCAGCTTTTCTCGAGATTGAATCATAGGAATCATT
TGATTTTTGGTACAAAGGTGCAAAACGGTGGTGGCCAAAATGTGAAGGAG
CCCGGTTTTCGAAAAAAAAAATTTTTGGGCAAATTTGGGCCAAAAAACGG
GTTTTTTGGACTTGGTGAAAAATTGGATCATTACATTTTTTTGATTTTTT
GCATGAAAGTAGGGTACCATCATAGGTAAAAGATGGCTCAAGCAGATTTT
TGCAAAAAAATTTATTTGGCTTAAAAAACGCATGTTTATCTATAAGAATC
ACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACTCAATTTCTT
TATGAGATAGAAGTTTTTTTTGCTCATGAGGGCTTACTTTTGAATAATAT
GTGTGTTTAGACATGAAATTTTGGTTGCTTGGCGTGTTTTTATAGAAAAA
CTGGCCAAGTTCAATATTTTTTTATAAGCATATTATCAATTACTTAGGTA
TTAGCTTTTCTCGAGATTGGCTCTTTCATTCTTTAAGACTTTTTGCACAA
AGAAGCATAATTATAAACCCTTGAATGTGACGGAGCCCAATTTTTGAGAA
AAAAAAATGTTTTTGGGCAAATTTGGGCCAAAAAACGGCTAAAAAGCGGG
TTTTTTGGACTTTGTGAAAAATTGAATCATTGATTTTTTCTGATTTTTTG
CATGGAAGTAGGGTACCATCATAGGTAAAAGATAGCTCAGGGAGATTTTT
GCAAAAATATTTGTTGGCTCAAAAAACGCATGTTTATCTATAAGAATGAC
TATTAATAAGCATACATTAATGTTCTTAGTCAAATTACTCAATTTTTTTA
TGAGATAGATGTTTTTTTTTGCTCAAGAGGGCTTACTTTTGAAGCATATG
TGTGTTTAGACATGGAATTTTGGTTCCTTGGCGTGTTTTTATAGAAAAAC
TGGCCAAATTCGATATTTTTTATAAGCACATTATCAATTACTTAGGTATT
AGCTTTTCTCGAGATTGGCTCTTTCATTCTTTATGATTTTTTGCACAAAG
ATGCATAACTATAAACCCTCGAATGTGACTGAGCCCAATTTTCGAAAAAA
AATGTTTTTGGGAAAATTTGGGCCAAAAAACGGCTAAAAAAAGGGTTTTT
TGGACTTTGTGAAATATTAGATCGATGTTTTTTTCTGATTTTTTGCATGA
AAGTAGGTAAAAGATGCGTCTAGCAGATTTTTGTAAAAAAACTTTTCAGC
TCAAAAAACGCATCTTTATCTATAAGAATCACTATTAATAAGCATACATC
AATGTTCTTAGCCAAATTACTCAATTTTTTGATGAGATAGATGTCTTTTT
ATGCTCACGAAGTCTTGAATATGAAAGAATATTTCAAGAGCATGAAATTT
TGGTTTCTAAACGTTTTTTTTATAAGAAACAGACGACTAATTTTAATAAA
TCGTCACTATTTGTGTTCTGAATGATTGTTTAACGTTCATGCTCACGTAG
ATATCAATTATATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGT
ATCACTTGTTAAATATGAATTTTATTAATTTATTTTGAATTTTTTTTTTT
CAGATTGAAAAAGAAGAGTGCTCCAATCATATTTTAAAATGATTCGAAGC
ATATTTTCTCTAAATTTTTACAGAAGCTTATCGTCTTTTCAGAGTCTGTT
GAAGAGAAGGTAAAATAACCCATTTTAGACTTTTTAACTTTTCCACAGCT
TTTCTGTACCATCATGGTGATAAATTTCAATTTCTTTCTAGAGAGGGGCT
TCTGGTTGGTATGGGCAATCCTTTACTTGACATATCTGCAAACTGTGACG
AAAGTTTCTTGACAAAGTAAGATTTTAACTTAATTCATCATTTTTATAAT
TTCTATTTTCTTACAAAACATTTGCATTATAATATATAACTATTGCAATT
GCTGTACTTAGTTGGGCACGAGCAAAATTATTTATTGATCATTTTATTCA
TTCATAGATACGACCTAAAAGCAAATGATGCTATATTAGCCTCAGAACCT
CACCTACCAATGTAAGAGATAACCCTTTGAATTTCTGTTTAATACACTTA
TTTATCAAAGCTTGTGACTGAGATAACTTATAATTGCCAAACTTCATGAG
AGCCTTGAAAATTTTTTTTGGGATAGCATCTAAAAGCATAATGTATTGCT
TGCATCTTGATAATGAAGATCCTGGAACTGTAAACAAGACCTGCTTGGGT
CTTGGGCTTGTTGAATGGTGAATGATTTCATTTTAAGATAAAGTTAAATT
CACAACCAATGGTTATTTAAAGGTACAAAGAAATGGTTGAAAAATTTGAT
GTTGAATACATTGCTGGTGGGGCAACATTGAATACAATGAGAGTGTGTCA
ATGGCTGGTGCAAAAGCCCAATGTCATTTCTTATTTTGGTTGTATTGGTA
TGTATTAAATTATTTTAAAAGTATTTGTCGACATTTTTAATCTTTCTAGT
AAAATGTTATTAAAACAAGATCAAAACTATTCTTCTTTTTATCCACAGGT
GACGATGACTATGGTAAAAAGTTAGTTGAAAAAGCCACAGAAGCAGGTGT
AAACATGAAGCCACAAGTTAATACAGAAAATGATACTGGAACCTGTGGTG
TACTCATCACAAACAAAGGTGCCAATCGATCCTTAGTTGCAAATCTTGCA
GCTGCCAACCACTTCAAACGAACTCATTTTGACCAAGAAGTTGTCAAGAA
AATCATTGATGGAGCAGATTATTTTTATATTGGGGTAAGAATGATTACCA
AATTATCTAAATTACTTTTTGAAATTGAAGAAACTTGGTAATTATTAAAT
TAAATAGATCATATTTTTCCAGCCTTTGGTCAAGGAAAATATGAAAAAAC
CTGAACTCGAAAAATATATCCAATAATATTGTACGAGTGAAATTGCGATA
ACTGGTTTATCGTCACTCAACTTGAATATATGACCAAACTTTTGATCCTT
AATTTGCGCAAAACTATTTGGACTTGACATCATGATAAAAGCTCTTCATT
TCATACCATAGGGTTTCTTCTTAACTGTCTCGCCTGAATCAATTTTGGAA
ATGGCAAAACATGCTAGTGACAATAATAAAGTAAGACTTGTATTACTTTC
TTGATTTTTTCCCTTTTTCGTATATTCTCTGTTACTTTGAATTAAGATCC
TTAGTGTCATTTTTCTTTGACTGATTGTATATTTCTTTAACGACAAAGAA
TGTCCTGGCTCAGCCTGGCTGGAAAATTCTTGCATCCTCTGATTTTGTGA
TTTCAAATTTCTGTGTGTTTTGTGTGATCTTGCAAATCGTGTGAGTTTGC
TGACTGCCCTGATTAAATCCACACAAAACTTATATATTTAGATTTCTGGC
TCAAAATACCCTGTAAATTTTCTATTTTTGACAAGAATCTGTGTTTTTAG
GGCCATTCTTAACTGATAATTTGCTGATTCGCAAAATTAGATCCAGGCAA
ATATTTTTGAAACGCTATTCGTGAAAATAAATTAAAAAACTTTGATTTTT
TCAGGAAATTAAATCTCATAAAAATTAATCAGATTAAAGTATGAAATTAG
TTTTAATAATCTTCAGATATTTCATTGATTTTTCCATTGCTTTTCATTTT
TCAGTATTGTATGACAAATTTGTCCGCTCCATTCTTATGCCAATTTTTCG
CAGAACCCATGATGAAATTCTTTCCTTACGTTGACGTTTTATTCGGAAAT
GAAACAGTAAGTTCTTAACTCCTAAGTACTTTTTAAGAGCAGCCTAGAGA
CTTAAATGGTCGGTTTTAATGCTGAAATTTGGCACAGCTATTCTTTGATG
AATCCTTGGGGTACTTTTTCATTCATTAAATAGTTGTTTGCGAAATTACG
GCTAAAATCTTGGTGCTCCCTGCTTGATACTTATAAAATAATTGTATTCG
GCTGATATTTGGCATCTCAAGTTAATGGCTGGATGGTTTCCTATTTATTT
GTGGAATTTCTTTTCTTCAAAATTTTGATTTTGTTAACGAACGACCATTA
TTGCCCTCTAGGAATTTCCACTAACTTGCTATCATTCTTGCTGTAATGTT
CATTTTCTTGAGAGCAAGGTTTTACATTTTAAATAACAAACAACTAACTA
CAAGCTCGTCGATACATATATTTTGATTTTTTTTTATATTTTAGGAAGCT
GTTGCATTTGCAAAACAACAAAATTTTGGCGTAAGTAAATTCTTTCATTT
TGTCAGTACTATATTGCCTTGGAGAGCTGAGGTAGATTTGGAGTAAAGAA
AATGAGAGATCATTTAGATTGATAATGAAAAAGTTTAAACTTACCAACCT
CTTACTATATCCACTACCTCTTTTAGACTGAAGACATCAAAGAAATCGCA
TTGAAAGCAGCAACACTCGATAAAATCAACAAAGGACGTGAACGAATCGT
TATTTTCACTCAAGGAAAAGACCCTACTATTGTGGCTACAGGTATAACCT
CCTCATCCAACCACTGGACTTCAAAGTGGCTTTTCTAGTTACACCTGGCA
CCGACCAATTCGGATTATAAACATGCCATGAAATTTTCAAAAGCCAACCA
ATAGGAACACCTCCTTTAAGCCTGCCCGACTAAAGGTTATTTTATGTGTT
TGTTCCCTAACTAATTTTTACTTCAAACAATATGCATTATTTTGCGTTTG
ATTGGATAGAACTAGAAGTCAAAAACTTTATTCTTACCCCTTTCATACTA
AACTTTCTAGAGGAAAATGAAGGTACTGCGATGTGTACGGAAATTACACA
GATTGTTTGTTGTTTAGGTGGTAAAGTAACCGAGTACCCAATCATCCCCA
TTGAAGCGAAAGACATCATCGATACGAACGGTGCCGGTGATTCATTTGTT
GGAGGTAAGAATTTCGGTGATTTGATCTCTATGCATTGCGTTTTGGGAAA
ATTCTTTACCCTAAAAGTACTCATTATTTTGTAACAGCTGTTGATAGGTC
TCATTTTCAATTTTCTCCTGTAACCACCTAGTAAACAAATGTACCATTTC
AAAAGATAAGGACTAATCATCTCTCATCGATCCCTTCACCAGATGAACGT
CGATCGAAGTTGTCTTACCATTATCATTATTATTATTTGTAGGATTTTTA
AGTCAATTTATGCAAGGTAAAGACATTCCAAGATGTGTGCAAGTTGGCAA
CTATGCTGCCAATTACATCATCCAACAATCTGGAGTAACACTAAGTGGAA
CTCCCAACGTCCCTGCTGAATAA Coding sequence (CDS) from alignment at sc0000199_pilon:468522..476494- >XLOC_034393 ID=XLOC_034393|Name=XLOC_034393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2142bp|location=Sequence derived from alignment at sc0000199_pilon:468522..476494- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGAACCACAATCGAAGAAACCAAGAGTTGGCCTAGAATGGCTGAA
CCACAATCGAAGAAACCAAGAGTTGGCCTAGAAGAGGGGCTTCTGGTTGG
TATGGGCAATCCTTTACTTGACATATCTGCAAACTGTGACGAAAGTTTCT
TGACAAAAGAGGGGCTTCTGGTTGGTATGGGCAATCCTTTACTTGACATA
TCTGCAAACTGTGACGAAAGTTTCTTGACAAAATACGACCTAAAAGCAAA
TGATGCTATATTAGCCTCAGAACCTCACCTACCAATATACGACCTAAAAG
CAAATGATGCTATATTAGCCTCAGAACCTCACCTACCAATGTACAAAGAA
ATGGTTGAAAAATTTGATGTTGAATACATTGCTGGTGGGGCAACATTGAA
TACAATGAGAGTGTGTCAATGGCTGGTGCAAAAGCCCAATGTCATTTCTT
ATTTTGGTTGTATTGGTACAAAGAAATGGTTGAAAAATTTGATGTTGAAT
ACATTGCTGGTGGGGCAACATTGAATACAATGAGAGTGTGTCAATGGCTG
GTGCAAAAGCCCAATGTCATTTCTTATTTTGGTTGTATTGGTGACGATGA
CTATGGTAAAAAGTTAGTTGAAAAAGCCACAGAAGCAGGTGTAAACATGA
AGCCACAAGTTAATACAGAAAATGATACTGGAACCTGTGGTGTACTCATC
ACAAACAAAGGTGCCAATCGATCCTTAGTTGCAAATCTTGCAGCTGCCAA
CCACTTCAAACGAACTCATTTTGACCAAGAAGTTGTCAAGAAAATCATTG
ATGGAGCAGATTATTTTTATATTGGGGTGACGATGACTATGGTAAAAAGT
TAGTTGAAAAAGCCACAGAAGCAGGTGTAAACATGAAGCCACAAGTTAAT
ACAGAAAATGATACTGGAACCTGTGGTGTACTCATCACAAACAAAGGTGC
CAATCGATCCTTAGTTGCAAATCTTGCAGCTGCCAACCACTTCAAACGAA
CTCATTTTGACCAAGAAGTTGTCAAGAAAATCATTGATGGAGCAGATTAT
TTTTATATTGGGGGTTTCTTCTTAACTGTCTCGCCTGAATCAATTTTGGA
AATGGCAAAACATGCTAGTGACAATAATAAAGGTTTCTTCTTAACTGTCT
CGCCTGAATCAATTTTGGAAATGGCAAAACATGCTAGTGACAATAATAAA
TATTGTATGACAAATTTGTCCGCTCCATTCTTATGCCAATTTTTCGCAGA
ACCCATGATGAAATTCTTTCCTTACGTTGACGTTTTATTCGGAAATGAAA
CATATTGTATGACAAATTTGTCCGCTCCATTCTTATGCCAATTTTTCGCA
GAACCCATGATGAAATTCTTTCCTTACGTTGACGTTTTATTCGGAAATGA
AACAGAAGCTGTTGCATTTGCAAAACAACAAAATTTTGGCGAAGCTGTTG
CATTTGCAAAACAACAAAATTTTGGCACTGAAGACATCAAAGAAATCGCA
TTGAAAGCAGCAACACTCGATAAAATCAACAAAGGACGTGAACGAATCGT
TATTTTCACTCAAGGAAAAGACCCTACTATTGTGGCTACAGACTGAAGAC
ATCAAAGAAATCGCATTGAAAGCAGCAACACTCGATAAAATCAACAAAGG
ACGTGAACGAATCGTTATTTTCACTCAAGGAAAAGACCCTACTATTGTGG
CTACAGGTGGTAAAGTAACCGAGTACCCAATCATCCCCATTGAAGCGAAA
GACATCATCGATACGAACGGTGCCGGTGATTCATTTGTTGGAGGTGGTAA
AGTAACCGAGTACCCAATCATCCCCATTGAAGCGAAAGACATCATCGATA
CGAACGGTGCCGGTGATTCATTTGTTGGAGGATTTTTAAGTCAATTTATG
CAAGGTAAAGACATTCCAAGATGTGTGCAAGTTGGCAACTATGCTGCCAA
TTACATCATCCAACAATCTGGAGTAACACTAAGTGGAACTCCCAACGTCC
CTGCTGAATAAGATTTTTAAGTCAATTTATGCAAGGTAAAGACATTCCAA
GATGTGTGCAAGTTGGCAACTATGCTGCCAATTACATCATCCAACAATCT
GGAGTAACACTAAGTGGAACTCCCAACGTCCCTGCTGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000199_pilon | genome | sc0000199_pilon:468522..476494 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 943-1071:130 |
| Aaloc | 856-939:455 |
| Aaloc | 739-852:898 |
| Aaloc | 703-738:1080 |
| Aaloc | 601-702:1620 |
| Aaloc | 532-600:2213 |
| Aaloc | 298-531:2724 |
| Aaloc | 172-294:2951 |
| Aaloc | 118-168:3266 |
| Aaloc | 43-114:3482 |
| Aaloc | 1-39:7974 |
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