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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000348_pilon:34110..39319+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034261 ID=XLOC_034261|Name=XLOC_034261|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5210bp|location=Sequence derived from alignment at sc0000348_pilon:34110..39319+ (Clytia hemisphaerica_ch_hm2_pilon)
atgAAACGTTACAGACGTCAAGAGATGGATGATTCCGAATCAGACCTTGA
GAAAGAAGCTGACGATTATGTTCCATACGTTCCAATCAAAGAACGTAAAA
AACAAATGTTGATTAAACACCGTATCATCAGTGAGttggaaaaacaaaaa
gacagtggccaagagagtgaaaatgaagaacttttgaaacaaaaagaaaa
agaagcacGCCAAGCTATGAGTTTGTTGGATCAACATCATGAATTCAAAG
ACGAGGAGGATGAAGTGAAAGAGACTGAAATGGAGAAACAGTTACGCGAG
GAACAGAAGATTCTTGAAAGTGTGGCTGAACGTAAAGCCTTGATGGCTGC
TACTGAGCTAGCTAAAGGTATCACTTACGAAGAGGCTTTAAAAACTTCTT
GGAAACCTCCCAGATATATTTCTGCGTATTCAGAAGAACGTCATGAGAAA
GTTCGTAAGAAATATGGCATCCTTGCTGAAGGTAATGATTGCCCTCCACC
TTTGAAACGTTTTCGTGAAATGAAATTTCCTAAAAGTATTTTGAACTGTT
TAAAAGCAAAAGGTATTACGAACCCAACTCCAATCCAAATGCAAGGCATC
CCGGTTACCTTGTCTGGTCGTGATATGATCGGAATCGCTTTTACTGGTTC
TGGAAAAACTCTGGTGTTTACGTTACCAATCGTTATGTTTTGTATTGAAC
AAGAAAAAGGGTTGCCTTTCCGTAAAGGTGAAGGCCCGTACGGTTTACTC
ATCTCGCCGTCCCGAGAGTTGGCCAAACAAACGGCCGACATTATTAAAGA
GTTTGTAGCAGCTTTGGCAAGAGATGGCTTACCAGAGTTGAAGGTTCTTT
GTTGTATCGGTGGAACTTCCATGAAAGAACAAGCAGAGACGATCAAGCAT
GGTGTTCACATTGTAGTGGCCACACCAGGACGTTTGATGGACTTGTTGAA
TAAGAAGATTATGAATCTCGATATTTGTCGGTAAGAATATGTTTtgcttt
ttctattttcaagttatctaactttcatcatcaggtaggtccattcagca
catttgataaataacgagattgctcacgggaatttctaGCCGGTGCGAGC
AAACccgcacctgtcaatcattttttagacctATCAATCATTTCTAagta
gtttttcctttttttcacttgtggttctgaaaaaagtgtttgtaagataa
cagaaaaagacgaaagtcgatttttatgcGTCTTTTTTAGCtgaaagttt
tggaatactggattttcgagagaagggaaagtcatgactcttgactcttg
actcttaCCAGCAAaccaacctgatccattttgaaatactgtacttgagt
CGACTTGAGTCAAACTGCATTCAGTGCATTGAGGTGACACTACTTagaaa
ctttttgtttcttaaaattataaCGGGAATTTTCGAAAACATCAATGAGA
Gcccataaaaccagaaaaagtttggctaatgctgacaaaataacaaactt
caacgcaccgtataggattcgaactctcaaAAACGATATTTCCAAATTGG
CCATTTTATCGCCATATCCACTCAGCCATGTAGGAGTTAACTGATGGTGA
ACAATGATTAATCATacaataattttatttaccctgtgtcaaggtattaa
cttcttaaacaaatgatttAAGATCATTTCCAACATGCAGGAGCCGATCA
CTCATCGAGATTTTCAGGGGATTTTCAGAACTCTTTAGTAGGACTGCAGC
AAACGGGCTGTAAACCCTGCTAGTGCctgtaaaattagaatttccatctg
gggggttagggcactctccaatctccttaaagtctcaaaagactgaggag
aggagctttttcttccatacagtacccatatacagcagacagaattcaca
gagcgtacacgcgcgggcgattattaaacacgatcgcgcggaatgcgggt
caaaaaattcccgtgagcaatctcgttatttatcaaaaagtcatTCAGCA
TCTAGTTTCAAGTTTTATTGTGAAGAAATTGTCTATGATTCgttatattc
atgacgtaatgtcttCACATGCGCAAGCACCTGAAATAGCCAGCGCATTT
GCCAGTTAGTGTTattgtttaaaattcaaaaattagtgACAAACACCCGC
ACTTTTACGAGTGCTTCTGTATAAAACATTATTTCATGAATATCGATCAA
GAAAAACCTTTTATTTAAGTGATTTCttgaaaacctgggctcaaaaaatt
cgaaaaagttgCAAAGTGTAAAAGATCTTAATTTTCCAATATTATTTAAT
ATATACTGTAGGATATACTGTTATTCACAATTTCACAATGGTTTTGgaca
aattttaaagatatttgattGTTGTCACCTAACAAAATTCGTTATATctt
atattcaataaattcaaatagaACATAAATGTTCACAGTCGCTTGAACTT
TTGGAGAGTGAAGGAAGGTTATCTTTGCTCCATGGAGTTAGACTGCCCCG
GAGGCACAATTTTCGACTTGTCGTTTGTCAGGGCGAGATCGATTAATGTT
GAAGATGTGTCAGTTATACGGGTAGGTTTTGTTATAATTTGGTCAAAACC
TTGCAGGtttaagaaatgtttttcatctCTGTGGTCGTTTCGGACGAGAT
AATTGATGACGGCAATGTGTAACTCTGAAAAGGAGAAAGTACCCAAAAAC
AGTGAAATTATcatattcaaaatgttaaaaaaaaataaaaaaaaaaaaaa
aaaaaataagacggAAATAAATATTAGATAAAATATCCTAAACGCCTCTC
TTTACTATCTCTGGTAAAAGATCATTACGTAGTGTTGTGGTGTTGTAAAC
AAATTGATACTGAATATTAGGGATATAGTTAAATGTAGCAACGAGAGTGA
AAACCAAAGCCTCACTAgatccaaaaataaattatccaGAAAAGAGATAG
TGTAGTGGCAAGTTAAAGGCTAAGCAGAGGCACTAtacttaaataaaatt
gaaagtatgAGACTTTAATTATATATACCTTTTCGCGTGATACGGTGTAG
ATAATGAGGTgatttatcttaaaaaaaacattgtttaaactgattttttt
ttgcacgttttgaataacactttttaaatacgtgaaatttgtttttttat
atttgtgaTTTTGTATCCTGACAAATATTtaaagctacacgttttttata
agtacaaactattataagaacatttcaaggctttgctgTCTCtgaaacac
caaatttcttagaaGATTGATaaaaaaaCCATCAAAGCGAAATGTTGCAA
TGATGAAGCTATTGTCATGTACTCTCGTACCTAATAAGCGTTTCTTATAC
CTCAAAGACCCTTCTAAGGGTTACAATTCACAAACCACAAACTGACTAAA
ACTGTTAGGAGGGTTCTCTAAAGACCGGTCTGGATACCGAATCTTTTATA
TTGAATAACCTAGTCTACACAATAGACAGCTCTAGGCTTTTATGCCTTAC
TCTTGGTCTATAGGCACTGCTATAGGCGGCCACTAGTAGCCCCCACCGGG
AAGTGCTTATTAATATGTTTAAACATAATAGAAATAGTTTCGAAACTCTC
TATTGtatcattaaaacctcagtgcgcatgcgatttatccgaagaatttc
aatattcagaCAAGAGCAGTGcccgggggggagggggtacttaggcaaaa
ataggtgctgggtatgtgcggacggtaagggtcgggttttttacctttca
aagtctctctaagggttacaaaaatcaggaaatttcaaagtagtctctct
aagggtgggaaaaatcacgatttttagaaaaaaaatttgattttgagaca
aaaaattacaaaaaagtctcactaagggtaggaaatttttgaaaatcaga
aaaaaattttcgaaaaagtctctctaagggtcactttttcactaaaattt
ggtctctctaagggtcggttttcggaggttccgtccgcacatacccctca
ttcaccaacccttgTAcccccccgggagcagtgctcatatcccgaagagt
aggagttttactctcgaaacgaaggaagatatgacgtagcctatgaATAA
CCATTCTCTTTAAACCCTTTGTGCGCGCTGTttttagcttttgatttaga
agatggttttggtaccatgcccctttaaatcaagtggtcaggagctatgg
CCTCAAACTGAGACTCAGTGTTGTTTTGGACGTatatacgcgtccctcgt
ggTCTAAGGGTTAATGGTCCTATTACAGGTTCACCTATCGATTCCCTAGA
CGAATTGTTTATTTTATTCCGTTCTTTTATGTACAAATTATTTGTTCTTC
TTTGTTGCAGGTATTTATGCTTGGACGAAGCTGATCGGATGATCGATATG
GGTTTCGAAGATGATGTTCGTGAAATCTTCTCCTATTTCAAAGGACAACG
TCAAACACTTCTTTTCTCTGCTACTATGcctaagaaaattcaaaattttg
ctcGATCAGCCCTTGTTCAACCGATCACAGTTAATGTAGGTCGAGCTGGT
GCAGCGAGTTTAAATATCATCCAAGAGGTGGAGTACGTACGAATGGACGA
AAAGATTGTTTATCTTTtagaatgtttacaaaaaacaGGACCCCCTGTTT
TGATTTTTGCTGAGAAAAAATCTGACGTCGATGATATTCATGAATATTTG
CTTCTCAAAAGCGTAGAAGCTGTGGCGGTTCATGGCGACAAAGATCAAGA
GGATCGACACCGATCCATCCAACAATATCGTAATCGGGAGAAAGACGTCC
TTGTTGCTACGGATATCGCATCAAAGGGTCTCGATTTCCCAAGTATACAA
CATGTTATCAACTATGACATGCCTGAGGACATCGAGAACTATGTGCATCG
TATCGGTCGTACGGGTCGTTCAGGGAAAAAAGGTGTCGCTACaactttta
taaacaaaaattcgGACGAATCAGTTTTGTTAGATTTGAAACATTTATTA
ATCGAATCCAAACAGAAATTACCACCTGTTCTGGCAGCTTTGGAATCAGA
ACATCAATACTTGAATGCAGGAGAACAACAAGGATGTTCTTATTGTGGTG
GTCTTGGTCACAGAATCACAGACTGTCCGAAATTACAAGCTGTCCAAAAC
AAACAAGTCGGGAGTATTGGTAAAGCTGACTTTTTGGCCAGTAACTCAGC
TGATTATTAA Coding sequence (CDS) from alignment at sc0000348_pilon:34110..39319+ >XLOC_034261 ID=XLOC_034261|Name=XLOC_034261|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3660bp|location=Sequence derived from alignment at sc0000348_pilon:34110..39319+ (Clytia hemisphaerica_ch_hm2_pilon)
atgAAACGTTACAGACGTCAAGAGATGGATGATTCCGAATCAGACCTTGA
GAAAGAAGCTGACGATTATGTTCCATACGTTCCAATCAAAGAACGTAAAA
AACAAATGTTGATTAAACACCGTATCATCAGTGAGttggaaaaacaaaaa
gacagtggccaagagagtgaaaatgaagaacttttgaaacaaaaagaaaa
agaagcacGCCAAGCTATGAGTTTGTTGGATCAACATCATGAATTCAAAG
ACGAGGAGGATGAAGTGAAAGAGACTGAAATGGAGAAACAGTTACGCGAG
GAACAGAAGATTCTTGAAAGTGTGGCTGAACGTAAAGCCTTGATGGCTGC
TACTGAGCTAGCTAAAGGTATCACTTACGAAGAGGCTTTAAAAACTTCTT
GGAAACCTCCCAGATATATTTCTGCGTATTCAGAAGAACGTCATGAGAAA
GTTCGTAAGAAATATGGCATCCTTGCTGAAGGTAATGATTGCCCTCCACC
TTTGAAACGTTTTCGTGAAATGAAATTTCCTAAAAGTATTTTGAACTGTT
TAAAAGCAAAAGGTATTACGAACCCAACTCCAATCCAAATGCAAGGCATC
CCGGTTACCTTGTCTGGTCGTGATATGATCGGAATCGCTTTTACTGGTTC
TGGAAAAACTCTGGTGTTTACGTTACCAATCGTTATGTTTTGTATTGAAC
AAGAAAAAGGGTTGCCTTTCCGTAAAGGTGAAGGCCCGTACGGTTTACTC
ATCTCGCCGTCCCGAGAGTTGGCCAAACAAACGGCCGACATTATTAAAGA
GTTTGTAGCAGCTTTGGCAAGAGATGGCTTACCAGAGTTGAAGGTTCTTT
GTTGTATCGGTGGAACTTCCATGAAAGAACAAGCAGAGACGATCAAGCAT
GGTGTTCACATTGTAGTGGCCACACCAGGACGTTTGATGGACTTGTTGAA
TAAGAAGATTATGAATCTCGATATTTGTCGatgAAACGTTACAGACGTCA
AGAGATGGATGATTCCGAATCAGACCTTGAGAAAGAAGCTGACGATTATG
TTCCATACGTTCCAATCAAAGAACGTAAAAAACAAATGTTGATTAAACAC
CGTATCATCAGTGAGttggaaaaacaaaaagacagtggccaagagagtga
aaatgaagaacttttgaaacaaaaagaaaaagaagcacGCCAAGCTATGA
GTTTGTTGGATCAACATCATGAATTCAAAGACGAGGAGGATGAAGTGAAA
GAGACTGAAATGGAGAAACAGTTACGCGAGGAACAGAAGATTCTTGAAAG
TGTGGCTGAACGTAAAGCCTTGATGGCTGCTACTGAGCTAGCTAAAGGTA
TCACTTACGAAGAGGCTTTAAAAACTTCTTGGAAACCTCCCAGATATATT
TCTGCGTATTCAGAAGAACGTCATGAGAAAGTTCGTAAGAAATATGGCAT
CCTTGCTGAAGGTAATGATTGCCCTCCACCTTTGAAACGTTTTCGTGAAA
TGAAATTTCCTAAAAGTATTTTGAACTGTTTAAAAGCAAAAGGTATTACG
AACCCAACTCCAATCCAAATGCAAGGCATCCCGGTTACCTTGTCTGGTCG
TGATATGATCGGAATCGCTTTTACTGGTTCTGGAAAAACTCTGGTGTTTA
CGTTACCAATCGTTATGTTTTGTATTGAACAAGAAAAAGGGTTGCCTTTC
CGTAAAGGTGAAGGCCCGTACGGTTTACTCATCTCGCCGTCCCGAGAGTT
GGCCAAACAAACGGCCGACATTATTAAAGAGTTTGTAGCAGCTTTGGCAA
GAGATGGCTTACCAGAGTTGAAGGTTCTTTGTTGTATCGGTGGAACTTCC
ATGAAAGAACAAGCAGAGACGATCAAGCATGGTGTTCACATTGTAGTGGC
CACACCAGGACGTTTGATGGACTTGTTGAATAAGAAGATTATGAATCTCG
ATATTTGTCGGTATTTATGCTTGGACGAAGCTGATCGGATGATCGATATG
GGTTTCGAAGATGATGTTCGTGAAATCTTCTCCTATTTCAAAGGACAACG
TCAAACACTTCTTTTCTCTGCTACTATGcctaagaaaattcaaaattttg
ctcGATCAGCCCTTGTTCAACCGATCACAGTTAATGTAGGTCGAGCTGGT
GCAGCGAGTTTAAATATCATCCAAGAGGTGGAGTACGTACGAATGGACGA
AAAGATTGTTTATCTTTtagaatgtttacaaaaaacaGGACCCCCTGTTT
TGATTTTTGCTGAGAAAAAATCTGACGTCGATGATATTCATGAATATTTG
CTTCTCAAAAGCGTAGAAGCTGTGGCGGTTCATGGCGACAAAGATCAAGA
GGATCGACACCGATCCATCCAACAATATCGTAATCGGGAGAAAGACGTCC
TTGTTGCTACGGATATCGCATCAAAGGGTCTCGATTTCCCAAGTATACAA
CATGTTATCAACTATGACATGCCTGAGGACATCGAGAACTATGTGCATCG
TATCGGTCGTACGGGTCGTTCAGGGAAAAAAGGTGTCGCTACaactttta
taaacaaaaattcgGACGAATCAGTTTTGTTAGATTTGAAACATTTATTA
ATCGAATCCAAACAGAAATTACCACCTGTTCTGGCAGCTTTGGAATCAGA
ACATCAATACTTGAATGCAGGAGAACAACAAGGATGTTCTTATTGTGGTG
GTCTTGGTCACAGAATCACAGACTGTCCGAAATTACAAGCTGTCCAAAAC
AAACAAGTCGGGAGTATTGGTAAAGCTGACTTTTTGGCCAGTAACTCAGC
TGATTATTAAGTATTTATGCTTGGACGAAGCTGATCGGATGATCGATATG
GGTTTCGAAGATGATGTTCGTGAAATCTTCTCCTATTTCAAAGGACAACG
TCAAACACTTCTTTTCTCTGCTACTATGcctaagaaaattcaaaattttg
ctcGATCAGCCCTTGTTCAACCGATCACAGTTAATGTAGGTCGAGCTGGT
GCAGCGAGTTTAAATATCATCCAAGAGGTGGAGTACGTACGAATGGACGA
AAAGATTGTTTATCTTTtagaatgtttacaaaaaacaGGACCCCCTGTTT
TGATTTTTGCTGAGAAAAAATCTGACGTCGATGATATTCATGAATATTTG
CTTCTCAAAAGCGTAGAAGCTGTGGCGGTTCATGGCGACAAAGATCAAGA
GGATCGACACCGATCCATCCAACAATATCGTAATCGGGAGAAAGACGTCC
TTGTTGCTACGGATATCGCATCAAAGGGTCTCGATTTCCCAAGTATACAA
CATGTTATCAACTATGACATGCCTGAGGACATCGAGAACTATGTGCATCG
TATCGGTCGTACGGGTCGTTCAGGGAAAAAAGGTGTCGCTACaactttta
taaacaaaaattcgGACGAATCAGTTTTGTTAGATTTGAAACATTTATTA
ATCGAATCCAAACAGAAATTACCACCTGTTCTGGCAGCTTTGGAATCAGA
ACATCAATACTTGAATGCAGGAGAACAACAAGGATGTTCTTATTGTGGTG
GTCTTGGTCACAGAATCACAGACTGTCCGAAATTACAAGCTGTCCAAAAC
AAACAAGTCGGGAGTATTGGTAAAGCTGACTTTTTGGCCAGTAACTCAGC
TGATTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348_pilon | genome | sc0000348_pilon:34110..39319 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 982-1830:4362 |
| Aaloc | 1-978:1 |
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