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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000102_pilon:819803..824872- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034240 ID=XLOC_034240|Name=XLOC_034240|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5070bp|location=Sequence derived from alignment at sc0000102_pilon:819803..824872- (Clytia hemisphaerica_ch_hm2_pilon)
TTCATTCTAGTTGGAGTGTGCGGCTTCATTTTATTACACGCCAGTCAAGT
TCAACCCAAGAATACAAGTTCTGTTATTATTGCAAACCTTCTCAGCTTAG
GTAAGTGTGTTCATTCTCTATTGCCTTACTCTTGTCTCCCGAATAGACGT
TCCCCCCGCTAATTGTTAAGAGAACAAAATCCATCCCCCCGCTATTATTT
AATATCTATTCAATATCTTATTACAGTGTAGATAGACCTTAAACTTTTCC
TTTTTGTTAGTATTGGTTCTTATTTTACGTGTTCATTTGTTAAAGTTTCT
TTTTTGTTGTTAAAAAAAATTCTGTCTTCGAATGACCCCCCTCTTATTCC
ATCCCCCCCCCCGCGCTTATTAGAATTTAGAAAATTTTTCTACCACCCTG
CTTATTGCTTATTCGGACCTCCTCCCCCCGTCTATTCGGATGACAAGAGT
AGCAACCAAAATATAGTTGAGGAACTTTAAAAATGTCTACAGACCTTTAT
CTAGAATTAAGGGCAAGATATTGTTGGCTAGATATGATGTATTGATGGAT
ATTAAATCTTCTTGGAGATTCTTTCAACTTTTCCTTTCTATTCCATTTCA
GCGGTTGGAACGATCATTTACTGGGCAATCGGTTTCGCTTTCGCTTTTGG
AGATGGTACGATAAAAAACAGCAACTTCTTCTTATCCTATGATCGATTCT
TCTTAATTGATGCAAGCGATGATGATTACGCGCAGTTTGGAAGCGAACTG
GTCTACCTGATGTTGGTGCTGGTGTTATGTAACAGTGGTTTTGTTTCACG
CATGCGCTATTGGGTTTATCCGTTGTTGACACTCTTTATTTCTGGTAAGT
TCATATCTTTATTTCTGTTCGTTTCCGTTTGTTTCATCTCTAGTATTTTC
TGAAAGGTGGTATTAAAAAAAGAAGCACTAATCAATCTGTAATCCTCTGA
AAAGAATAGCGATGTTAGCGACCTCATTAGAAGAAATTTTGGTGGGAAGA
AATTATGGCAAATGAGTTCATTCGCCAATTTTGGTGCAATTTGGCGTAAT
TTATTTTGGCGATTTAATAAAATTTCTAAATTTGACGAGAATTACTTTTG
GCGAACGATCCATTTTTTGTCGAATATTTAAGCTTAAAAAGGATGAAAAA
GGGGTTTTTAGGAGAACTAGTGTGAAAGAATTAAAAGAAATTTAAATTTG
GCGAGAATTAATTAAGTTTGCGACCGCAGTCGAAGACGACCCGAAGCACT
TTTTTCGATACTCGAAGGTAGGGAAAGGCGCTCTTTCTACCTGGATTGCT
CCAAATTGATTGCTGAGAGTCAAACAGAGAGGCGTCATGCCAGAGATTGA
ACCCATAACTCTTGTGCACCGTAGCCGAAAATGCTCTACCTTTGCACGGC
TACAGTCTTTAAAATGAAATTGTAGCAGATTTTCATTGAGGCAGAAACTT
GACGTTGATTTTTGTATTTCTTTTCACAAGGTGTTATATATCCTTTTGTG
ATCCACTGGACAAAACATCCGGAAGGTTGGTTGAAATCTGGCATCGAAGT
AGAAATAGATGGAAAGGACAAAATATTAAGTTATCAGGTATGTAAACCAA
ACCAAACAACCATTTTGTTTTAGCACGATAGTCTTGCCGAAACCCCTCTG
AACATGCAAGAAACTACCTTATCGGTCCTTTTTACGCCGGCCCTTATTGG
CATTTTTTTTTTTTGGGCTCGTGGCGTAATAAGGGCCGGTGTTTGATACT
GAAAGATGACATTTTAATGTAAATTTTAGTTAATACTGTTTTGATGCCTG
AATAGCAGTTTTTACAAGCTTTGGCATTATTTACGGCCCTAATTGGCGTA
AGCCCAAAATTAGGCTGTGGCGAAATAAGGGCCGGCGTAAAAGGGACCGG
CGTCAAATTAGGGCCGACGTTCAATTAAGGCCGGCGTAAAAAGTGCCGGT
AAGGTAGATGAAAATCAGACCACGCGAATATTTGAGATGTTCCTCTTTTC
TAATGATCAGTAATGGCCACTTTCGGAAAGGGGAAAAACGGTGTGATTTG
CTTGTACCAGATACTGCCCTTTTTTCAACATCGTCCGTTTGTAACTTTTA
ACAAATATCCCCCACCAGAAATCTTGGGGGATGATTGACTTAACTTGAAG
TCATGTCAGTACTGTTTCAAAGAACTGACGTCACTTCAATCTAAAGCAAC
TCAACCATTTCACAGTCGGAATGAATCACGGGTAATTAGGACTGGTTGCG
CTCTAGTACCGACGCTTTGCGACTGTGAAATAAAAATCTGACCAACAAAG
TAATTGAAAAATCGTGCGGTTGGAAAGTTTAGCCGAAGACCATGTTCGCA
CGTGACGGTTGTGTTCCGCTCCGAAACGGAATGAAGCCATTATATTGGTT
AGAAGTGACGTAACACTTGAATGTAACCGATAGAATGGCTCATTTGGTTT
TTGAGCGAAAAAGAACCGTCACGTGCGAACATGGTCTTCGGCTAGACTAG
TCTGGAAGTCTATAATTGTAGCTCTGCCATACTTTACTTATATTCAGGAT
GACGGGGGAGCGGCGTGGATTCACGTGCTCAGTGGTAGTGTGAGTTTGAT
CGGAACAATTTTGTTGGCGCCACGAAAAGATCGACAGGGAAAGAAATTTC
GTCCAGTTGGCGGAAACTTGACCCCCGTAAGTCGAAATTTGATTCTGTTA
GTCGCCTTAAATTGGTCTTGAACCCGTGTCTCTGATCTAAATGGTTTTAT
GAGGAGTTTCACCACCAATGGATTTCATCCTCTCATTTTCAAATCAATTC
GTCATAAGCTTTATTAAGGTATTGCTCTTGATAACGATGACCTGTCTTAG
GAGATTATTCCCTGGAACAAAAAGAAGTCCATGGCTGATAAAAAAATACA
ACTCTTCTTTTGCCCTTACACTTTTTTATAATAACTCCAATTTTCACCAC
CCTAAATATCATACAATATTTTTTGCTTATTTAGTCAAAGGCTTATTGTC
TACCATGTATAGATTTATCGTTTTCTATGGATAGAATATCTATTACTTTA
CGAGATGGCAAAAAAATCTGTTAATTTGAGCCTTCGATCCTTAGCAACCT
AGTTGCATAAATGTGTAATAGGGAATAAAGACATGTATCAAAAAGCCATT
CTAGAAAATATTTCTCTGTCTATTTTCAGTTGATGCTAGTAGGATATTTC
CTGGCTGTCATCAGTTTGCTAGCCAAACAACAGACAGGTAAAAGACACTT
AGCCAACAGCCTTCTGGCGGCTGAAGGTGCCGCTTTGGTATCGTTCGCTT
TGAAAAGGACTGGATATTTTGGTGATCGATCATCGACTAAAGCTCTCATC
AACGGAAGCATCTCTGGTTTGGTGAGTTTTTTTGAAATATGGGAGAACTT
GCAAACTTCCCTTAGTTCGCTTTTTCATGATTCTTATAGCACTCACGATT
GTATCACGTCCATCAGTAAAATCAAAGAGTTGTGCAAGCGGCTCTGGTTA
CGAGATTTGGGCACTTGCTTCTCATGGCTCTTTTATACCCTTCCCTTCCG
TGCGAAAGACCTTTTTACATAAATCGCGTTATGAACAGCCCCTTAGGGAC
CGCTTGCCCGCAACATAAGTTTTGGTGACCAGCCAAAAGCCATATTTCTT
AAACAAACACATCTGTTTGATCAGATTCTGATGCTGAACTAAACGTACGG
ATGAGAGCAGAACTCTTGGACACGATTAATCTTCATACCTCTCTTTCAGG
TGGCGATTTCAGTGCTTTCAAACGATTACCTAGCGTACAGTGCATTCGTC
GTGGGAGTGATAGGTGGTCTCGCCTTCACTGTATGGAGCGCGCTTTTACA
ATTATGTCGAATTGACGATCCAACTGACTCTGCAGCAGGTTGGTTCTGAA
ACACTTTTTGAAGATTGTGAGATCTTACTAAACACCTTCACAGTCTCACA
GCCCCGGTGGAACTTTTTCCTTAGTGGGGATTAAAATTCCTATTCAAATC
CCAATGGGGATAGAAATTCCATTGTTCCTTCATCTAACTCACCCTTATTA
TAAACAAGTCTCTAGAACTTGGAGGCTCAATAATTTGAAAAAATGTCCCT
GAGCTCGAGTGTTAATGGAGACTCTATGTAATATCGGTTCTAGTTTTATA
AGAAGAAATAACTTATTTCTTTCAACATCCAATTTCAGTTCACCTTGGTG
CCGGCTTTTGGGCAGCCATCGCAAGTCCATTGTTTCGAAAAACCGGGGGT
ATCATTTATGATGTTAGCAAATACAATTTGCAGATGTTTGGTTGGCACTT
GTTGGCAGCGGTAGCCATCTTTGTGTGGAGTGGTCTGACTGTCTTCTTGG
TACTCATATTCTTCGTGTTCGCAAGATCCATTAAATACAGTGGCCGAGAA
GGTATGTATTTTATTTGTTATTCTAGATATTTATTAAGCAATGTTTTATA
CAGAAGCAACTAAAAAAGACCGACTGTTTCACACTAATTTTGATTTAAAC
AACGTCAAAACAATTTCGGGTGCTCCTCTATAAAACATTAGTTTAGGTAT
AACTCTTTCTAAAGCGTTTAATAATTTTGATATTTATGATATTCATTACA
TTATGTTTTCTACGGTTTTCCCCGGTTTTCCCCGGTAGTGGCAAATTTTT
AAACAATTTTTCTCTAGCTTAAATTTGCCACTACTGGAAAATAAACCGGG
TGTTATTCCACATTACATCGTGAATATCATGAATTCATACGTCGATAAAG
TATACCAGTCTCAGAATCAAAAGCGAAAGTAAGAAAGTCTTTTAACAGTG
AACCACAATAATTATTGTGCTCATTGCTTATGAATTTAACAAATTTAACC
CTTAGCTGCAGAAATTGGTCTCGATCAATTGGAACACAAAGAACCAGCAT
ATCCCGACCGCGAGCAATACACACCTGACAGGACTGACCAGATCTTAGAC
GATCTTTTCTTAAAAGATACCGGAATGTATGCATACGATAATCGGGCATC
GCAAAACAGCGGAGCTTTCGATAACCGGGAATCAAGAAGAGATGGGAATG
AACAATTTGCAAAATATTGA Coding sequence (CDS) from alignment at sc0000102_pilon:819803..824872- >XLOC_034240 ID=XLOC_034240|Name=XLOC_034240|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2676bp|location=Sequence derived from alignment at sc0000102_pilon:819803..824872- (Clytia hemisphaerica_ch_hm2_pilon)
TTCATTCTAGTTGGAGTGTGCGGCTTCATTTTATTACACGCCAGTCAAGT
TCAACCCAAGAATACAAGTTCTGTTATTATTGCAAACCTTCTCAGCTTAG
TTCATTCTAGTTGGAGTGTGCGGCTTCATTTTATTACACGCCAGTCAAGT
TCAACCCAAGAATACAAGTTCTGTTATTATTGCAAACCTTCTCAGCTTAG
CGGTTGGAACGATCATTTACTGGGCAATCGGTTTCGCTTTCGCTTTTGGA
GATGGTACGATAAAAAACAGCAACTTCTTCTTATCCTATGATCGATTCTT
CTTAATTGATGCAAGCGATGATGATTACGCGCAGTTTGGAAGCGAACTGG
TCTACCTGATGTTGGTGCTGGTGTTATGTAACAGTGGTTTTGTTTCACGC
ATGCGCTATTGGGTTTATCCGTTGTTGACACTCTTTATTTCTGCGGTTGG
AACGATCATTTACTGGGCAATCGGTTTCGCTTTCGCTTTTGGAGATGGTA
CGATAAAAAACAGCAACTTCTTCTTATCCTATGATCGATTCTTCTTAATT
GATGCAAGCGATGATGATTACGCGCAGTTTGGAAGCGAACTGGTCTACCT
GATGTTGGTGCTGGTGTTATGTAACAGTGGTTTTGTTTCACGCATGCGCT
ATTGGGTTTATCCGTTGTTGACACTCTTTATTTCTGGTGTTATATATCCT
TTTGTGATCCACTGGACAAAACATCCGGAAGGTTGGTTGAAATCTGGCAT
CGAAGTAGAAATAGATGGAAAGGACAAAATATTAAGTTATCAGGTGTTAT
ATATCCTTTTGTGATCCACTGGACAAAACATCCGGAAGGTTGGTTGAAAT
CTGGCATCGAAGTAGAAATAGATGGAAAGGACAAAATATTAAGTTATCAG
GATGACGGGGGAGCGGCGTGGATTCACGTGCTCAGTGGTAGTGTGAGTTT
GATCGGAACAATTTTGTTGGCGCCACGAAAAGATCGACAGGGAAAGAAAT
TTCGTCCAGTTGGCGGAAACTTGACCCCCGATGACGGGGGAGCGGCGTGG
ATTCACGTGCTCAGTGGTAGTGTGAGTTTGATCGGAACAATTTTGTTGGC
GCCACGAAAAGATCGACAGGGAAAGAAATTTCGTCCAGTTGGCGGAAACT
TGACCCCCTTGATGCTAGTAGGATATTTCCTGGCTGTCATCAGTTTGCTA
GCCAAACAACAGACAGGTAAAAGACACTTAGCCAACAGCCTTCTGGCGGC
TGAAGGTGCCGCTTTGGTATCGTTCGCTTTGAAAAGGACTGGATATTTTG
GTGATCGATCATCGACTAAAGCTCTCATCAACGGAAGCATCTCTGGTTTG
TTGATGCTAGTAGGATATTTCCTGGCTGTCATCAGTTTGCTAGCCAAACA
ACAGACAGGTAAAAGACACTTAGCCAACAGCCTTCTGGCGGCTGAAGGTG
CCGCTTTGGTATCGTTCGCTTTGAAAAGGACTGGATATTTTGGTGATCGA
TCATCGACTAAAGCTCTCATCAACGGAAGCATCTCTGGTTTGGTGGCGAT
TTCAGTGCTTTCAAACGATTACCTAGCGTACAGTGCATTCGTCGTGGGAG
TGATAGGTGGTCTCGCCTTCACTGTATGGAGCGCGCTTTTACAATTATGT
CGAATTGACGATCCAACTGACTCTGCAGCAGGTGGCGATTTCAGTGCTTT
CAAACGATTACCTAGCGTACAGTGCATTCGTCGTGGGAGTGATAGGTGGT
CTCGCCTTCACTGTATGGAGCGCGCTTTTACAATTATGTCGAATTGACGA
TCCAACTGACTCTGCAGCAGTTCACCTTGGTGCCGGCTTTTGGGCAGCCA
TCGCAAGTCCATTGTTTCGAAAAACCGGGGGTATCATTTATGATGTTAGC
AAATACAATTTGCAGATGTTTGGTTGGCACTTGTTGGCAGCGGTAGCCAT
CTTTGTGTGGAGTGGTCTGACTGTCTTCTTGGTACTCATATTCTTCGTGT
TCGCAAGATCCATTAAATACAGTGGCCGAGAAGTTCACCTTGGTGCCGGC
TTTTGGGCAGCCATCGCAAGTCCATTGTTTCGAAAAACCGGGGGTATCAT
TTATGATGTTAGCAAATACAATTTGCAGATGTTTGGTTGGCACTTGTTGG
CAGCGGTAGCCATCTTTGTGTGGAGTGGTCTGACTGTCTTCTTGGTACTC
ATATTCTTCGTGTTCGCAAGATCCATTAAATACAGTGGCCGAGAAGCTGC
AGAAATTGGTCTCGATCAATTGGAACACAAAGAACCAGCATATCCCGACC
GCGAGCAATACACACCTGACAGGACTGACCAGATCTTAGACGATCTTTTC
TTAAAAGATACCGGAATGTATGCATACGATAATCGGGCATCGCAAAACAG
CGGAGCTTTCGATAACCGGGAATCAAGAAGAGATGGGAATGAACAATTTG
CAAAATATTGACTGCAGAAATTGGTCTCGATCAATTGGAACACAAAGAAC
CAGCATATCCCGACCGCGAGCAATACACACCTGACAGGACTGACCAGATC
TTAGACGATCTTTTCTTAAAAGATACCGGAATGTATGCATACGATAATCG
GGCATCGCAAAACAGCGGAGCTTTCGATAACCGGGAATCAAGAAGAGATG
GGAATGAACAATTTGCAAAATATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102_pilon | genome | sc0000102_pilon:819803..824872 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1138-1350:214 |
| Aaloc | 925-1134:881 |
| Aaloc | 784-921:1322 |
| Aaloc | 592-783:1892 |
| Aaloc | 463-591:2524 |
| Aaloc | 358-462:3589 |
| Aaloc | 115-354:4468 |
| Aaloc | 13-111:5071 |
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