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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000102_pilon:986322..991632- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034235 ID=XLOC_034235|Name=XLOC_034235|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5311bp|location=Sequence derived from alignment at sc0000102_pilon:986322..991632- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATTGTTCGAAGGCAATCATTTTGAAATGATTTCGTCCATTATACG
TAAGTTGAGAGACTGAACATGAATTTTGTTTCACTATTACACATTTCCTT
AAGGGCTTTCCTTAGAAATTCAATTGATGGGTTTGGAGTTAAAGGGCTCA
GTGCCCCGATAGAACTTTTTCCCCTCAATGGGGATGAAAATTTCTATCAA
AATGCCAATGGGGATAGAAAATCTATTGTTTCCAGCTCGAAAATTCCAGT
GGGGATGGTTTTGGAATACAATTTTTTACATTCAGTTTTCAATGGGGATA
AAATCATAGAGCAATTTCGCACTGGGGTTGAAATTGTAGGATATTTTTTC
CACCGGGGTGGGGGGTCCACCGGGTCTGTGAAACAGGGGTGTAGGGAAGC
ATAAGAAGAAGATAAAGCCAAAAATATGATTTCGTCATTTATACGTAAGT
CTGCGTAATTAGAGAGCGACAGAACGTGAATTTGGCTTCACTATTACACG
TATGGTTCAAGTCATCTTAGAAACTCACTTGACGAGTCTAAAGTTTAAAA
CGAGAAGAATAAAAGATGAGGGTACATAAGGCAAAAAATTAAATGTATAC
AAATTACATAAATTTGAGACCGGTATGAAATTTTAAAGTCTAATTTTAGA
GTCTAATTATAGGTCGGAAAAATTGTCATGTCGGCATTTGAATCCCTCTG
AGAAAAGCTCCTTTTGAATGGTATAGTATCATGCTATAATACAAAACAGG
TCTGAAAATATCACACTAAAGATATTCGTAACAACATGACCAGGTCAACC
ATTCTGAGAAAGGTTAAATCAAATAAATAAATAACAGGGAGCTATGTCTC
TTTGTAAATGATACAGTAAAATGTCACTGTTAGGAGAACTATTCAATGAG
TGATAAGGCTGCCTCGTTTTAATACCATAGGAGGCACTGCAGTGTAATGA
AAGCAATATATTGTAGCTAACATTAAGAAAGAAATAGAAAAAACAATTTT
TGCACACTGAGTGATGAACTGTTGTACTTTTAATATTGATTTTATGTATT
AGCAATTTTGAGGACGGTAGAGTGGCTCAATTAAACCGCAAAATCTAGGA
CGGTTAAGAGTGCTGATTTACCTTCGTTCTCAGTCAATCAGGACCGAGTT
TCTGTATAGGAGGACATCGAGAGCGACGGTAAGTGAAGTCGATGCAAAAC
AAAGTCGATAGTTGATGTACGGCTGGCTCTATATCGCCTTTACTGACCAA
AACAGACGACGGTATTTTGGTATTTTTAACCGTCTCTGAGTAAAGTGGAC
CGAAATTTTAGGACATGTCAATTTTACTTTATACCGTCTCCTTCAATTTA
TCTCGAATACATGAACTCGCTAGGATCTAGACAAATGAGAAGCTAACAGT
CTCTGTTGCTGAAAAACACAGATGCATAAACTCGCTAATATGAATCATTT
GGCTGTTTGACAATAATTAGCAGTGTCTAGAGTCAGCTGTTTATAAACAA
CCGCAAAAAAGGATTCCATTTTGTACGGTAATGACTTCCTCAGAGTGGTA
AAGAGGTTGGTTTTGGTAGAAAAAATGTGTCGGTGTGATTTTCGTTCGGT
GATTTATGACCTTATTCTTCATAAGAACGTTTTTAAGGATAGTAAAATCG
AGAACAGACTTGTTAGATCCTAATGTAATGAAAAGATTATACGCAAATTT
TGAAACGTTCCGATTAGGCTTAGTGGAAAGCAAGAAACGACATCGTGTAG
AAAGGTTATTCGAAATTTAGTGTAGGACTTCTTCACTTCACTTCTGGAAA
ACATTATTTCTTAAAAGAAAACTTGATTTCTTAATTATGCTTTAAAGCTA
GTTCAACGATCAATATACTTATTTTTTGACATATAAACCTGCGTTACGCA
GCAGGACAACAATTATTCGAAATAGACTTTTACATGATACGGAACATATA
CAATTTGGTGCTTTGTACTGCATGTAGGAGTTAGATACTTTCTAGAACGT
AGTTTGAAAGAAGTTGTCCATAACTAAATTTCAAAAGTTATTAATAAAAA
CGAATGGATTTTTTTTTCAGGAGTAGCGATAGAAGAACAAGGCTTTGGAG
AAGGGCTCACATCAAGCACTAAAGAAAGACTTCGTTTATCCTTATCTGGC
ACATCGAGCGATTCACAAATGTCAGGAACCAAACACGGTAATGGAAACAC
CTCGCGTGAAGAGCGGAGAAAAAGTCGGAAGATCAAAACAACGCGATCAG
TAGAAACACAGACAGAAGAAAACTCGTTTTGTCTTTGTTTCATACCAGAG
TACAAAGCACAGTTAGATGAAGAACAAGAACTGGACCCTCGCATTCGTTT
AATGTTAGATCAATTACACGTGCTTACTGAAGGGAAGGTCACGTGTGTTG
TCCGAAATTTTGAGAAAAAACCGAAATGGACTGCTAAACAACGCTGGAAA
ATGTCAGGTAATTTTAGATCACTGACCTTTATCATACCCTGGACCAAGCT
TCATCCTCCATGTTTGATAGGAGCTTTTTCCCATGCCATACTCTTGTCTC
CCGTATATACGGGGGGTCCGAATAAGCAGGGGGGTAGGAAAATTTTCTAA
ATTCTAATAAGCGGGGGGGATGGAATAAGAGGGGGGGGTAGTTTAAAGAC
AGATTTTTTTCTAACTGGTATCAATTTCAACAACAAAAAAGAAACTTTAA
CAAATAAACACGTAAAATAAGAACCAATACCAACAAAAAGGAAAATTTAA
ACATGTTTAAGGTCTATCTACACTGTAATAAAATATTGAATTATTCGAAT
TTAATTAGCGGGGGGGGGGTCTTAATAAGAGCGGGGGGGTGGACCTTTTT
GTCTCTTAACAATTAGCGGGGGGACGTCTATTCGGGAGACAAGAGTAGTG
GGAGCACGACTCGATGTGGGTCAATTTATAATTCAATGAAATTTTCTGTT
TAAAGATTTTTTCACCCACATTGAGTAGTGCTACCATTAGAGTATCAATT
TAAAAGAACTCTGATCAAAGATTTTGCTTGGGCCGGGATCTGCCGGGATC
GAGAAATTTTGTCCAGGGTATATAAAGGTCAGTGGTCTAGATAACCAATC
TATTCAAATTATCATAAACTGGACAAATGATGGTTTCACTTCGAGGGAAA
GTTTTTAGATGAAATATAAATTATTGATGAAGATAGGGTCTTTGCGGTTC
GAACATTGATAATGACTTTAAATAAAAAAACATCTTTTCTGCTATCAAAA
ATAAACTGAATGTGACTGCATTAAAACCTCTACCTACATTTTGGCAAAAG
AACATCAACATCGCTTGGGAGACTTTGGTACATGAATCTAGCAACTCCTC
CCAACCTCCCAACATAGCTTCTTTTGAAATGGACAACACGAAACCCACCC
AAAATAAAGTTCTAACCCCAGGTACTAATTTTGCAGGATGCGAAAGTTTT
CGAAAATATGAAAAAATATAATTTAGTGAAAACCAATTTTCAAGAAAACC
AAAACCAAGAACAATTTTATAAGAACGATTTTATAAGAACGTAAGGCTAA
AAAATTTGCCAAAATCTAAGAACAATTTAAAACCGCCCAAGTCTCAGACT
CTAGAGATTACTAAGAAAGTACAGGTTTTAAACCCATTTCAGACTTTAAG
TAAAGAAACTAAGCGTATTAAGAACGTCGTAAGAACATTAAAGCTTGAAA
ATTTCAAAAAATAAGAACAGCCCAGCCTCGCCAAAACTTATAAAAAATTA
GCCTTTGGAAGGGAAAAATAAGAATTTTTTTGCTCACCCCTAGGGAAATT
GGATTTCACTGGCCATAAGTGTAAGACGAAAGAAAAAGTCACAGTAATCC
AAATTTTCCTATTGTTTAAACAGGTTTAAAGAGTCTGATATTATTTGTAA
GTTTCCCTGGATTGAATTTGCTATGATTCGAAACTAATACCTTTTCTATT
CAACAGGGAATGCAGTACGAGCGGTCGGCAAATTTAAGGGAAAGAAAAAG
AAGTTGATGAATGTAACGTTAACGAATTATGAAGATGAAGAACTGAAAAG
TGGGTTTTACACCAAAGATGTTGTCGAACAAGAAAATGAAGAGGAAGATG
ATTTCTTCACTAATATCATCAAAGCCAAAAGACGTTTCTCCCTCAAGAGG
TTCAGTTTGAAGAAACGGAATCCACGACAAAGGAGTTATAGTGATTATGG
TGGACAACGTGATCGGTTAATCGAGCAAACGAATGGGATAATTGAGGCAC
ATAATGGCGCAGGTAAAGCGATTGAGGTTCCTGAGGTTCCAAAGAGCCAG
GAGAATTTGATCATTGAGAGTTTTATAAACGAATGTATGAGAGAAAGCAT
GCGGAATCATAAAAATAATAACAAAAACAATCGAGAAAAAGAACGCCATC
GCAGCGATCGCAGCAGTGCGGAGGAAAATAGAGATCAAGATGATGAACGT
GACAATAAGAGTGGAACATATTCACCAGCGACACAAAAAGAACGAAAACA
CGTCACTAGGAGTATTACGATGCCTAACAACGGATCACGTTATACGAAAG
ATTCAGCCGCGGACGACCGCCGCGAGACGATTCCGCGTGAAGCGAGGCGG
AGTGAGGGGGAGGATCGTGTAGAGGAATCACGAAAGAAAACAAGGAGACC
ACGAAGTGATGTTGTAGGGATAACAGACATTGCCGAGAGACAGAAAAGAG
CTTCTGAGCGCATGTCAAATTATTATGAGAAAACAACAAATTTGAGTCAA
GAGGAACATCCATTCAGTAGACGAAACGGTATCAAAAAACATTCACGTCA
AGAAAACGGTTATGATTCGGAACACGGTAGTACGTTGTCTGCATTCGCAT
TGGTACCCGGTACAGACTTACAACGAAAACTCTCGCAACACGGCATTAAC
GATAAAGCCTCTATAGACGTTATAACGAGACAAACTCGAACAAACGGTTC
ACAGAAAAGTAAACCGGACAGAAAATATCCTCCACCGTCATCGTCAGCGA
GGAACCCAAAACCAACTCATCATAGGCGTTCCTTTCAAAGTGTAGACAAT
ATATATGCATCTTCTTCAACCTCCTCCATACATCAAAACAAGCGTTTCTC
ATCATCACATATGACGAACAATCTCCAGAATTCTTTCAGTGCTGATGATA
TCGATGATACATCTTCACACGTGTTCAAACCTTTGAAAAGTGAGATTAAA
GATGGCGGCACATTGAACTTTATGGTAACTTCAACTCCAAGAGAAATAGT
TGAAGATGTTCCAGAGGAACGTGAGGCTGAAGAGGAAGAAGGATATGCAA
CTTATGTTTGA Coding sequence (CDS) from alignment at sc0000102_pilon:986322..991632- >XLOC_034235 ID=XLOC_034235|Name=XLOC_034235|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3582bp|location=Sequence derived from alignment at sc0000102_pilon:986322..991632- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAATTGTTCGAAGGCAATCATTTTGAAATGATTTCGTCCATTATACA
TGGAATTGTTCGAAGGCAATCATTTTGAAATGATTTCGTCCATTATACGA
GTAGCGATAGAAGAACAAGGCTTTGGAGAAGGGCTCACATCAAGCACTAA
AGAAAGACTTCGTTTATCCTTATCTGGCACATCGAGCGATTCACAAATGT
CAGGAACCAAACACGGTAATGGAAACACCTCGCGTGAAGAGCGGAGAAAA
AGTCGGAAGATCAAAACAACGCGATCAGTAGAAACACAGACAGAAGAAAA
CTCGTTTTGTCTTTGTTTCATACCAGAGTACAAAGCACAGTTAGATGAAG
AACAAGAACTGGACCCTCGCATTCGTTTAATGTTAGATCAATTACACGTG
CTTACTGAAGGGAAGGTCACGTGTGTTGTCCGAAATTTTGAGAAAAAACC
GAAATGGACTGCTAAACAACGCTGGAAAATGTCAGGAGTAGCGATAGAAG
AACAAGGCTTTGGAGAAGGGCTCACATCAAGCACTAAAGAAAGACTTCGT
TTATCCTTATCTGGCACATCGAGCGATTCACAAATGTCAGGAACCAAACA
CGGTAATGGAAACACCTCGCGTGAAGAGCGGAGAAAAAGTCGGAAGATCA
AAACAACGCGATCAGTAGAAACACAGACAGAAGAAAACTCGTTTTGTCTT
TGTTTCATACCAGAGTACAAAGCACAGTTAGATGAAGAACAAGAACTGGA
CCCTCGCATTCGTTTAATGTTAGATCAATTACACGTGCTTACTGAAGGGA
AGGTCACGTGTGTTGTCCGAAATTTTGAGAAAAAACCGAAATGGACTGCT
AAACAACGCTGGAAAATGTCAGGGAATGCAGTACGAGCGGTCGGCAAATT
TAAGGGAAAGAAAAAGAAGTTGATGAATGTAACGTTAACGAATTATGAAG
ATGAAGAACTGAAAAGTGGGTTTTACACCAAAGATGTTGTCGAACAAGAA
AATGAAGAGGAAGATGATTTCTTCACTAATATCATCAAAGCCAAAAGACG
TTTCTCCCTCAAGAGGTTCAGTTTGAAGAAACGGAATCCACGACAAAGGA
GTTATAGTGATTATGGTGGACAACGTGATCGGTTAATCGAGCAAACGAAT
GGGATAATTGAGGCACATAATGGCGCAGGTAAAGCGATTGAGGTTCCTGA
GGTTCCAAAGAGCCAGGAGAATTTGATCATTGAGAGTTTTATAAACGAAT
GTATGAGAGAAAGCATGCGGAATCATAAAAATAATAACAAAAACAATCGA
GAAAAAGAACGCCATCGCAGCGATCGCAGCAGTGCGGAGGAAAATAGAGA
TCAAGATGATGAACGTGACAATAAGAGTGGAACATATTCACCAGCGACAC
AAAAAGAACGAAAACACGTCACTAGGAGTATTACGATGCCTAACAACGGA
TCACGTTATACGAAAGATTCAGCCGCGGACGACCGCCGCGAGACGATTCC
GCGTGAAGCGAGGCGGAGTGAGGGGGAGGATCGTGTAGAGGAATCACGAA
AGAAAACAAGGAGACCACGAAGTGATGTTGTAGGGATAACAGACATTGCC
GAGAGACAGAAAAGAGCTTCTGAGCGCATGTCAAATTATTATGAGAAAAC
AACAAATTTGAGTCAAGAGGAACATCCATTCAGTAGACGAAACGGTATCA
AAAAACATTCACGTCAAGAAAACGGTTATGATTCGGAACACGGTAGTACG
TTGTCTGCATTCGCATTGGTACCCGGTACAGACTTACAACGAAAACTCTC
GCAACACGGCATTAACGATAAAGCCTCTATAGACGTTATAACGAGACAAA
CTCGAACAAACGGTTCACAGAAAAGTAAACCGGACAGAAAATATCCTCCA
CCGTCATCGTCAGCGAGGAACCCAAAACCAACTCATCATAGGCGTTCCTT
TCAAAGTGTAGACAATATATATGCATCTTCTTCAACCTCCTCCATACATC
AAAACAAGCGTTTCTCATCATCACATATGACGAACAATCTCCAGAATTCT
TTCAGTGCTGATGATATCGATGATACATCTTCACACGTGTTCAAACCTTT
GAAAAGTGAGATTAAAGATGGCGGCACATTGAACTTTATGGTAACTTCAA
CTCCAAGAGAAATAGTTGAAGATGTTCCAGAGGAACGTGAGGCTGAAGAG
GAAGAAGGATATGCAACTTATGTTTGAGGAATGCAGTACGAGCGGTCGGC
AAATTTAAGGGAAAGAAAAAGAAGTTGATGAATGTAACGTTAACGAATTA
TGAAGATGAAGAACTGAAAAGTGGGTTTTACACCAAAGATGTTGTCGAAC
AAGAAAATGAAGAGGAAGATGATTTCTTCACTAATATCATCAAAGCCAAA
AGACGTTTCTCCCTCAAGAGGTTCAGTTTGAAGAAACGGAATCCACGACA
AAGGAGTTATAGTGATTATGGTGGACAACGTGATCGGTTAATCGAGCAAA
CGAATGGGATAATTGAGGCACATAATGGCGCAGGTAAAGCGATTGAGGTT
CCTGAGGTTCCAAAGAGCCAGGAGAATTTGATCATTGAGAGTTTTATAAA
CGAATGTATGAGAGAAAGCATGCGGAATCATAAAAATAATAACAAAAACA
ATCGAGAAAAAGAACGCCATCGCAGCGATCGCAGCAGTGCGGAGGAAAAT
AGAGATCAAGATGATGAACGTGACAATAAGAGTGGAACATATTCACCAGC
GACACAAAAAGAACGAAAACACGTCACTAGGAGTATTACGATGCCTAACA
ACGGATCACGTTATACGAAAGATTCAGCCGCGGACGACCGCCGCGAGACG
ATTCCGCGTGAAGCGAGGCGGAGTGAGGGGGAGGATCGTGTAGAGGAATC
ACGAAAGAAAACAAGGAGACCACGAAGTGATGTTGTAGGGATAACAGACA
TTGCCGAGAGACAGAAAAGAGCTTCTGAGCGCATGTCAAATTATTATGAG
AAAACAACAAATTTGAGTCAAGAGGAACATCCATTCAGTAGACGAAACGG
TATCAAAAAACATTCACGTCAAGAAAACGGTTATGATTCGGAACACGGTA
GTACGTTGTCTGCATTCGCATTGGTACCCGGTACAGACTTACAACGAAAA
CTCTCGCAACACGGCATTAACGATAAAGCCTCTATAGACGTTATAACGAG
ACAAACTCGAACAAACGGTTCACAGAAAAGTAAACCGGACAGAAAATATC
CTCCACCGTCATCGTCAGCGAGGAACCCAAAACCAACTCATCATAGGCGT
TCCTTTCAAAGTGTAGACAATATATATGCATCTTCTTCAACCTCCTCCAT
ACATCAAAACAAGCGTTTCTCATCATCACATATGACGAACAATCTCCAGA
ATTCTTTCAGTGCTGATGATATCGATGATACATCTTCACACGTGTTCAAA
CCTTTGAAAAGTGAGATTAAAGATGGCGGCACATTGAACTTTATGGTAAC
TTCAACTCCAAGAGAAATAGTTGAAGATGTTCCAGAGGAACGTGAGGCTG
AAGAGGAAGAAGGATATGCAACTTATGTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000102_pilon | genome | sc0000102_pilon:986322..991632 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 439-1791:1354 |
| Aaloc | 52-435:3240 |
| Aaloc | 1-48:5312 |
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