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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:688867..694253- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034225 ID=XLOC_034225|Name=XLOC_034225|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5387bp|location=Sequence derived from alignment at sc0000103_pilon:688867..694253- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCATCAAATCGTTCCAGCATGTCATCTATTACGAAATTGCATGA
AGATGAAGATCTCGATCTTTTAGATCTTCTAGAAAAAAACGGTATCCTTC
TACAATGTGAAGTCAACCCTCAAAATACGAGATTTTCCGACAAATCAACA
TCCTGTTCAACTCGATCGTCGTATGCAACTATTTCACCGACTCCCGACGA
CAATTATTACGAGTGTTTTGATTATACGGACGAAGAGAAAAAACGACCGG
ACTCGGATGAAGAATCAGTCGGAACAGACGATGATTTGGTTACTATTCAT
CACGACGAACGAACGCGTGTTGAGAGAGAAGAAGTGAAGCAAAACATCTG
CCACAATGTGAAAGCAAAAGAAAATGAAAATGATTCAAACATACAACAAA
GGTTTATTGAAACGAATGGAATAGAAGAGAGAAGAAGAAATTTATTCTGC
TTTTGTTCAACAACGTGTCTCGTAAAATACCTAGGTGTTTTGTTATTCTT
AGTTGGTGTTCTCTACGCGTTCAGTATTTGGAGTTTTCTTCAACTGGCTC
CTGCTTCGACCTTCAATTATGTTCAAGGACCTCTTCCAATCTGTTTACCA
TGTACGACGGTAGGTAGTCTGTTTTTTCTTTATTCTTATGATTATTCTAT
TGTCTGTATTTTTATCGACTTGTACGCATGCGTTGTTCTATTATAATATG
ATTTTCATATTACGAAAGTCATTCTATATTATAACATTACTAGTCCCTTA
TATGAGTTGTCATTGAATTCAAGAACTTCCATCTTTAGGATTTTTCGTTT
CTGAAGTCTCCATACACCCCAGACTTATTTAGCTGTACTGTATTCATTTC
TCGTCAGTATTATCAGATAATCGTTTACTTTAAAAGAGGGTGTGTACCTA
AGTTCGTTTTTTTCGTTAGATACTTTTTAAAAAAGTTCAAATTTGAGTTC
GGAATTAGGAATAAGCATTTTTTGTTGAACCCATTTTTTCGATCAACAAA
ATTAGAGGTGAAGTTTTCCTTTCCTATTTATAGAAGGGTTTACACACAAC
AGCGGTTCAATCCTTATGCTTTTTGCTACCTCTCTCGCTTCCAAGGGCTT
CCGCCTTATAAAAAATTTCAACATTTCCATAAGAAAAAGAAGTATGAAAA
GCAGAAAATTTTATAAAACAAAAAAGAAAATGATATCTACTAATTCTTTT
TCGCACTGTTTTTTTACTTCATAAGTTTTAATTTCTTTTCTTCTTCAATC
TTTTCTTCTTCTCCCTCTTTCTCTCTCTCTATGTTTATATGCTTCAGTTG
ATATTACCTTATGAACTTCTTTTCTTTTGTTCCGGTTAATTTGTTATGGT
GACTCAGCACCCTGAGATGTAATAAGTGACTCACTCTAAAAAATCTCTCC
ACATCATTATTACTGACTTTTTTCAAAGTCTTAAAAAAGATTCTTGGCCC
AATTAATCAAAATTTATCTCTTCTCTTTCCTCTTCTTCTTCGATTACATA
GATTTATTGATTTTCCAGAACTTCTCGTTTTGATAATTCACATTGGCATT
GCTCATCCTATACATGCATCAATAAACAAAATATTAAGAACATTTTAAGA
ACATTTTGAGGCTTTGCGAACTCTAAAACACCCGATTTTTTTGGAAAATG
AAAGAAAATACTCACAAAATGGAGAAAATATAAAAACAAAAAATATTTTT
AGGCTTAAACTCAAAAAGTTAAAAACATCCGAAAGCTATTAAAATTTTGG
ATGCTCTTATAAAAAAGGGTGTACTGGGTCCATACATCACATCGTCGTAC
ACATGACTAAAAATAAGTGTCTTAGAAAATTGAAAATCTTGCAATTCTGT
TCTGCCTTTGAGATTGGTCTTTTTTGCCATATGAAAACATTGATTATTCC
TCTACATGAAAAAAAGGGCAATGTCAATCTCAAAGATGACCACCACAGTA
AAACTTTAAATTTTGTAAGGTACTAATTTTGAGATTTAACCTTTTTAGTC
ATGTGAACGACTACATAGATATTTAGATTACTGGAACTATTTGTGTTTCA
TTGACGTCTGTCTCCACACTTTTATAACAAGCAATGTTATGAGGCTAAAA
AATGGCAAAAATTTAAGAAGAAACAAACATTAGTAGGGAATGACTAAATA
TGAAGCAGTTTGAGGGTAAAAAGCCTATAATGCTATAAGAACAGGGTAAG
AACAATGAGACTCGACAAAAATTAAATGGTTCGTTAAAAAAAGTGTTTAA
AATGGAATTCCCCTTAGTTTTCTTCCTCACTCCAAGAAAATAACAAAAAG
ATACAAACCGAATTTAGGTAAAGGTTTTGTGTCATGGAATCGCCAAGTAA
TCAATGCAGTACCTAAACCAATTGTCTTCTTTTCATAGTCTCTTTCATGC
CTTTCGATCACTACAATTGGGGGTATCAGGATAAAGTGTTACGCCTGGGG
GGTACTAACACAAAAATGAGTGCTGGGTATGTGCAGACTGTAAGAGTTGG
TTTTTTCACCCTTCAAAGCATCTCTAAGGTTCGGGAAAATCAGAAAGTTT
TAAATTAGTCTCTCTAAAAGTCGGAATTTAGGATTTTTTTTTTATTTCAA
GTGAAAAAATTGTAAAAAAGTCTCGCTAAGGTTACCACTTTTTTCAAAAA
TCGAAGAAAATCTTTCAAAAAAGTCTCTCTAGGGATCGGTTTTCGGACGT
CTCGTCCGCACATACCCCTCATCCGCCAACCCTAGTATCCCCGGGGTGTT
ATGTTATTCAGGACGAGCGCCCTACAAATTTCAACAATTTCCTAATGGCA
TTATTTCTCATTCTTTAAAAGTTTGGTTACTTATTAAATGTTGATTGATG
AATAGCAATTAAGAATTTCCTTGGTAACTAAAATTTGAGCGAGAATTTGT
TATACCTTATCCGCCCATTTTTCGTATACCCAACCAAGCGGGAAGTCATT
AAACCTCGTTCAATTTCGCTGAATCGTGTTTACCCCCCACTTTTGTGTTT
ACCGCCCATTTTTGTGTTTACTGCCCATTTTTCTAGTCTATGAAAACAAT
AGCTAGGTTAGATTCAATCTATGGGAAAGAAATCCTTTATAGGTTCAGAA
TTTGGCTTTCAATATAAGGTTGCAGTCGAATACCTTAGCCTTTCAGGTAT
ATAAGAACATAAGGTTTCGAAGGCCAAAATGTTAAGAACAAGATGAGAAC
ATTTTAAGGCTTTATGGACTCAAAAACACTCGATTGGTTAAGAACATTTT
TAGGCTCGAAACTCAAAAAGTTAAAACATCCGAAGGCTTCAAAAATTTTG
GATGTTCTTATAAAAAAACGTTTACATCATTGCAAATACTTAACTGGTTA
ATAATTCCTTTCTTATCTTTCGATATTTCAGATGATATTTACTGGTCTGA
TTGCCTTAGTAACAGATCTTTTACATAAGCACCTACCCAATAGAAGATAT
ATTTTACTTGTAAGTATTTTCTTTTACCCCCCCCTACAGTTTACTGCAAA
GCAATCGATAATACAATAAATCAAAAGAAAACAAAATCATGAAAAACCAA
AGAATTTGAAATATTTAGCACACAATTTTAGATTTTTATCCCTCTTGTAA
TAAAATAATTATCGTTGGAAAGATATTTAGTAAGTCCTAAGTTTTTAATA
CCTTTGATGCTTTTTTGATATTTCCTTAGCATCTTCTCTTTTATATCTGT
CCATTGATATACGAATTCCATTGTTGCTGATATGGATTTTTTATCAATTT
CTTTCTTCAGGTTTTGTTTGTTTTGGTGTTATCAGTAGCATGTACATTAT
TCTGTGGCTTCAGTCTTATCTATCTCATTGGTGTTATTCAAGATTCACTT
CATCAGCTCAATGGATGCAGCTTTGACGAACTTGATCGTATTTGCTCCTG
TTATGGTCCTAATCACAAGATCTTCAAATTTGCTGAAAACTTAGGTTGCA
ATGCTGTAAAAGACAAACTGAAGGAGCTAGCTTATGGTGTCAGCATCTTG
TTTGGTGTCGGATGTTTAATCTCCCTGGCAACAGCGACGGCTGCCGGTTT
TTTGTTATGTCGCGAACGACGTAATCGAAATCACCGAGTGGTAAGTTTCT
TTGTTGTTTAAGTTTTTTTATCCCTTCATGACGTTCATGGTACCCAAGGT
CAATTGTGGTGTGTACATAGTTTCGCAGTTGATGGAAATTTTTTCACATG
AATTTAATTTTGCATTAGTAAAACAAGAATTATTCAGTATTTGACCTAAA
AATGCTGATTTTGTGTTTTCCAAAGTCAAGATAGATGACAAGTTGAAATC
TCCTAAATGGGTTCTTACACGTCAAAATTCTATTGTTTTGCGGCTTAAAA
AGTGCAAATTGAATATTTAGCTTTGGAAAAGAGTTAAACAGAAATATTTA
GAGCCATAGAGGTTTTGTCCAGTTTCGTGGAAGGCATCTAGATGCACCAG
ATAAACCCTGATCGCTCCTTTAGAAGTCTTTTGCTTCATCTATACTGGTT
AAAAGAATTACTTTGCGACCCGACATTGACTAGGAGCTGTTTAGAATAAG
AAAGTTTACTCCCTATTGCGCCTTCTCTTATTAAATACTTGTGGATCCCT
AAAAAAGTCTCTAGGTATCCCCGAAATGGAATCAGAATCCCCAAGATGTT
GTATTTCTGAAAGAGAATTCTGAATTTACCATAAACTCTTTCTAATTCGA
AGTTCCATTTATTCTAATCATGCGAGTTGTTATCCTTTTGGATCCCTTAG
CTTAGAATTAGAAATTGCTTACTAAAGATTCACTCTTTAATTTTAACCCT
ACTCTATATCGAACACAACTTATTGTCTTGAAGAGGGAACTTGTAAGAAA
TTTTATCCTCCTCTTCTCTTACTATAGGAATACACGAGATCAAGACTCGA
GCGTGGATCGACAACCGTTCAAAATGAATCAGCCGTCAAACACGACAATA
AAACACGACACAAGAATGACGTTCACGAAGAAAATGACGACGACAATGAT
ATCTCTGAAACACATAGACTAGCTGCTCATCACCTCAGACAGGAGAGAAC
TGAGACTAGTCAACCAGCTAACACTTCTCAACGTACAAAACTTTATCACG
CAAAGCGAGATTCTAAAAGGCATAAGAATAGACACAGCCACAAAACACAA
CAACTACTTAAACAAAGGGATCCATCTAAAAATACAAAGATTACGTCAGT
TGCTACCCAGACCCCTAATTACATGATACCAGTCTCCTCTTTAATGTATG
ACGTCATCGATCCGAACACAGAGCATCACCATGGGAACGAAAGTGAAGAT
ACATACAGTGAACTTAGCATAGATGCCACCCTCAGTCCGCCCTCTTATAC
AGAGGCGGTCAAGGTTCTTAAAAAAGATAAATATTGA Coding sequence (CDS) from alignment at sc0000103_pilon:688867..694253- >XLOC_034225 ID=XLOC_034225|Name=XLOC_034225|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3054bp|location=Sequence derived from alignment at sc0000103_pilon:688867..694253- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATCATCAAATCGTTCCAGCATGTCATCTATTACGAAATTGCATGA
AGATGAAGATCTCGATCTTTTAGATCTTCTAGAAAAAAACGGTATCCTTC
TACAATGTGAAGTCAACCCTCAAAATACGAGATTTTCCGACAAATCAACA
TCCTGTTCAACTCGATCGTCGTATGCAACTATTTCACCGACTCCCGACGA
CAATTATTACGAGTGTTTTGATTATACGGACGAAGAGAAAAAACGACCGG
ACTCGGATGAAGAATCAGTCGGAACAGACGATGATTTGGTTACTATTCAT
CACGACGAACGAACGCGTGTTGAGAGAGAAGAAGTGAAGCAAAACATCTG
CCACAATGTGAAAGCAAAAGAAAATGAAAATGATTCAAACATACAACAAA
GGTTTATTGAAACGAATGGAATAGAAGAGAGAAGAAGAAATTTATTCTGC
TTTTGTTCAACAACGTGTCTCGTAAAATACCTAGGTGTTTTGTTATTCTT
AGTTGGTGTTCTCTACGCGTTCAGTATTTGGAGTTTTCTTCAACTGGCTC
CTGCTTCGACCTTCAATTATGTTCAAGGACCTCTTCCAATCTGTTTACCA
TGTACGACGATGGCATCATCAAATCGTTCCAGCATGTCATCTATTACGAA
ATTGCATGAAGATGAAGATCTCGATCTTTTAGATCTTCTAGAAAAAAACG
GTATCCTTCTACAATGTGAAGTCAACCCTCAAAATACGAGATTTTCCGAC
AAATCAACATCCTGTTCAACTCGATCGTCGTATGCAACTATTTCACCGAC
TCCCGACGACAATTATTACGAGTGTTTTGATTATACGGACGAAGAGAAAA
AACGACCGGACTCGGATGAAGAATCAGTCGGAACAGACGATGATTTGGTT
ACTATTCATCACGACGAACGAACGCGTGTTGAGAGAGAAGAAGTGAAGCA
AAACATCTGCCACAATGTGAAAGCAAAAGAAAATGAAAATGATTCAAACA
TACAACAAAGGTTTATTGAAACGAATGGAATAGAAGAGAGAAGAAGAAAT
TTATTCTGCTTTTGTTCAACAACGTGTCTCGTAAAATACCTAGGTGTTTT
GTTATTCTTAGTTGGTGTTCTCTACGCGTTCAGTATTTGGAGTTTTCTTC
AACTGGCTCCTGCTTCGACCTTCAATTATGTTCAAGGACCTCTTCCAATC
TGTTTACCATGTACGACGATGATATTTACTGGTCTGATTGCCTTAGTAAC
AGATCTTTTACATAAGCACCTACCCAATAGAAGATATATTTTACTTATGA
TATTTACTGGTCTGATTGCCTTAGTAACAGATCTTTTACATAAGCACCTA
CCCAATAGAAGATATATTTTACTTGTTTTGTTTGTTTTGGTGTTATCAGT
AGCATGTACATTATTCTGTGGCTTCAGTCTTATCTATCTCATTGGTGTTA
TTCAAGATTCACTTCATCAGCTCAATGGATGCAGCTTTGACGAACTTGAT
CGTATTTGCTCCTGTTATGGTCCTAATCACAAGATCTTCAAATTTGCTGA
AAACTTAGGTTGCAATGCTGTAAAAGACAAACTGAAGGAGCTAGCTTATG
GTGTCAGCATCTTGTTTGGTGTCGGATGTTTAATCTCCCTGGCAACAGCG
ACGGCTGCCGGTTTTTTGTTATGTCGCGAACGACGTAATCGAAATCACCG
AGTGGTTTTGTTTGTTTTGGTGTTATCAGTAGCATGTACATTATTCTGTG
GCTTCAGTCTTATCTATCTCATTGGTGTTATTCAAGATTCACTTCATCAG
CTCAATGGATGCAGCTTTGACGAACTTGATCGTATTTGCTCCTGTTATGG
TCCTAATCACAAGATCTTCAAATTTGCTGAAAACTTAGGTTGCAATGCTG
TAAAAGACAAACTGAAGGAGCTAGCTTATGGTGTCAGCATCTTGTTTGGT
GTCGGATGTTTAATCTCCCTGGCAACAGCGACGGCTGCCGGTTTTTTGTT
ATGTCGCGAACGACGTAATCGAAATCACCGAGTGGAATACACGAGATCAA
GACTCGAGCGTGGATCGACAACCGTTCAAAATGAATCAGCCGTCAAACAC
GACAATAAAACACGACACAAGAATGACGTTCACGAAGAAAATGACGACGA
CAATGATATCTCTGAAACACATAGACTAGCTGCTCATCACCTCAGACAGG
AGAGAACTGAGACTAGTCAACCAGCTAACACTTCTCAACGTACAAAACTT
TATCACGCAAAGCGAGATTCTAAAAGGCATAAGAATAGACACAGCCACAA
AACACAACAACTACTTAAACAAAGGGATCCATCTAAAAATACAAAGATTA
CGTCAGTTGCTACCCAGACCCCTAATTACATGATACCAGTCTCCTCTTTA
ATGTATGACGTCATCGATCCGAACACAGAGCATCACCATGGGAACGAAAG
TGAAGATACATACAGTGAACTTAGCATAGATGCCACCCTCAGTCCGCCCT
CTTATACAGAGGCGGTCAAGGTTCTTAAAAAAGATAAATATTGAGAATAC
ACGAGATCAAGACTCGAGCGTGGATCGACAACCGTTCAAAATGAATCAGC
CGTCAAACACGACAATAAAACACGACACAAGAATGACGTTCACGAAGAAA
ATGACGACGACAATGATATCTCTGAAACACATAGACTAGCTGCTCATCAC
CTCAGACAGGAGAGAACTGAGACTAGTCAACCAGCTAACACTTCTCAACG
TACAAAACTTTATCACGCAAAGCGAGATTCTAAAAGGCATAAGAATAGAC
ACAGCCACAAAACACAACAACTACTTAAACAAAGGGATCCATCTAAAAAT
ACAAAGATTACGTCAGTTGCTACCCAGACCCCTAATTACATGATACCAGT
CTCCTCTTTAATGTATGACGTCATCGATCCGAACACAGAGCATCACCATG
GGAACGAAAGTGAAGATACATACAGTGAACTTAGCATAGATGCCACCCTC
AGTCCGCCCTCTTATACAGAGGCGGTCAAGGTTCTTAAAAAAGATAAATA
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:688867..694253 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1018-1527:511 |
| Aaloc | 688-1017:1628 |
| Aaloc | 610-687:2007 |
| Aaloc | 1-609:5388 |
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