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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:868601..873325- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034219 ID=XLOC_034219|Name=XLOC_034219|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4725bp|location=Sequence derived from alignment at sc0000103_pilon:868601..873325- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTTATCTTTGGTTCTTATTGCATCCGCACTTGTTGTTGCTGTTTC
AGCAGGTATAAATCTAAACTTTAATAAATAAAATGGTCCAAGATAGATAG
TTGTTTACCGAGTTCTTTAGGTTGCAAACAAAATTCCCCAGTTAAAGGCG
CTGCTGACTAGGCTCTGAACTTAGCTGACGGGGAAATCAGTAAATCACAA
GTATCTCTAACAGGGTTGACTTTTGGTCATTTCACCTCTTTTTAGATTTT
GGTTTAAGAAAAAATATCAGTTTTTTGCATCCGCCAGAGTACAAATTTCG
TCAATCAGGATGAAAATTATAGTCTACAACAAGAACCAATTTTTGTTAAA
AACTGATATCTGACAAGATCAATTTATTGAACTTTAACGGACTCAGTATC
CATTCCAAGGGCTCGATTATCTCAACTTTTATCGAAATTTGTTTTCGCTT
TAGAATGTCATCAAGACAAGGCCCAATTTTGCTTGGGATGGAAATTAGCT
GGATATTGCAAGAGAAGCAGCAAACATCACACATGGATGAAAGAACATTG
TGCTGATACGTGTGATTTTCCTTGCCCTACCACTCAACCACCAACTTCGG
GTAAGAGCTACAATAAACAGTTCAATTTTCACCCAACAGACTCACACAGA
CTATTTCTGAAGGGTCTACTTCTTTTGGTCCCGATGGGACCCCAGTTCCA
TTGGAGAATTTGGCCATAAAATACGTCCCCAGTTGGATAAATAGCCTACT
TTTTCAGCCATACTCGGAAATTGACTTTGATTTCATCCCCAATTAAAATT
CAAAAGGAAAAATTACACTTCAAAATCATCCCCACTGGATTTTTTTAACC
TGAGAACAATAGGATTTTTTTCCCCAATTGGGATTTCGAAAGAAATTGTC
ATACCGAATGTGGGAAGAAGTTTCACCGGGGCTATGAGATAGGGGTGTTG
TTATATTGATATCAATTCTATTGTTTTTGTCTTTGGCGGGCCAGGCACTA
TCTGGCCTCGTTTTCGGGGATTGGCGGGTCCAACCAAATTATATTTTTAG
GTTTACGGGTAAGGGTTGTTGAACCCGACTGGGGACGAGGCACATCTAAG
GGAAATTGGCTCACCGATGGGAAATTGGCCCGCTCCCTTTAGAGCTTTAG
CGTGGGCGGCCGCTTTTATCAACCCTGTATCAAGACTGCTTAACTCTTCA
ATAAATACAACGTTTCAACATCTGATTACCACCATAGGCTGTGCGGATAA
AAATGAAGCATATTGCAAAAAATATGCTCTGAATTGTTTCCGTGATGGTT
GGAAAGATTATTTGAAAGTTCAATGCCCCAAAACTTGCAAGGCTTGTGGA
GGTAGGTTATGATATCACATACTATATTTTATATCGAGTACTTTATTCAT
TCTGATAACATCTTCTAAGTTTGTAAGTGATTCCTAATTATAAATGTCCT
TCTAATCACCCTTTGTCAGACTATATAGACACCAAACGATCTACAGCATG
TAAATTATATCAGGTAGGATGCCAGTAGGTCATGGATGATCTTGCTACTT
CCTTTATTTTTCAGGTGCGGCCACAACCCCACAAGGTCCCTTACCAACAC
AAGCATCTGGACAATGTGGAGTCAAAGGCGATGGTCACACCCGTATTGTT
GGTGGTACTAATGCACGACCTGGTGATTGGCCGTGGCAGGTATAATTCGT
TGAAATTTATTTTGACCGTAAAGTGCGATACCGTAGGGCTGTACATAACT
TGCCAAAGCAAACCATGCAAGTGAAATCTTATGTACAGGCCTACGATATT
GCATTGAACGGTCTAAATAAACACTTGCTTAACCTCGCTAATAGATATAG
AAAGACATGAAAAACAAAAGGACCTTTTACCTCAAGGCAACCGATTTCTG
TATTAGAATGCAATTTAAAAATGAAAATATGTTAATTACGGAACTAATTT
TCGTGAACATTGAACAATTTTGTTTAAGTCTTTGAAAATAGCTTTGACTT
AGCTACTACGACAGTTAACAAAATGCCGTAAAAAGTAAAAATCAATCATA
CCTTCACCCGAGCCTTCACCCTTTCTTAATTTTTTCTTATGATAAAAAAA
TCAAAGGTTTGATTAGATTCGTTATCTCCCCAAAACCTATCAAGTTTTAA
TCTGATAATAAATCGTCCGGGAATTAACAAATCCAAGGCCAGGGGCATTC
ATCTTTGAATCTAATCTGAGCCGCAGACTTTCTGTATAAGAAACTCTTTT
CGCTAGAGAATAAGCAGAAGTCTACTTAAAATCGGGCTTCTATGACTGGG
CTGTTCCATTAAAAAGCCATACAGGGGGGTGGACGAAAATTTTCAAGAAT
AAAATACCCCCTGGAAAATAGTAAAATTTGAAAAAATACGCTTAGAAAGA
TTCTTTTCATACCTTAAAATGAGGGTGGACGAACTAAAATCAGTCTTTTC
TCCCTGGAAATTTTAGAATAACTTTTTACCCCCCTTGGAAGAATGAAAAG
ACACCCCTGGAAATTCTGCTTGAATTGCCCCCTGGAAATGTTCGTAAACC
CCCCCCCCTCCTGTATGCATATAAAATGGAATGGCCCATTCTTCTTTTAT
TACTAGGTACAAATCGATTTGAACACTGACTGGGGGCGTTATTGGTGTGG
AGGCACCTTGATCAATGACGAATGGATTGTCAGTGCTGCTCATTGCTTTG
AAGATGATACCAGAGCGAGAAACTATGACATCTATTTGGGTAAGCTCCGC
ATAATGTCTTCCTCTATATAGTTTTTCAAAGCAACAATCCTTTATGTACA
GTAAAATGTATATAAATAAAATGATCGATATGGATATGATATCTATCTAT
CTTTTACAAGAAGTAAGCCTCTTACAGCCCACGTTGGGAGTGGGGAGACT
GAATACCATGAGTATTACAGTGTATGAATAAGCCCCATTAATTCCAGAAT
TTAGTCTGTATCCCCCTATATTGAGAGGGTCTGACATCCAGGGTGGTAAG
TAAAATAAGGTGGAAAATCCAGGGTGGTATGTAAAATAAGGTGGAAAACC
CAGGGTGGTCAGTAAAATGAGCTTGAAAACCGGGTGGTCAGTAAAGGAAG
TCGAAAATCCAGGTTGACCATAAAATGAGTAAAAGAAATCCAAGGAGGTC
CTGAATGATTGAAAAATAAGTACCTTTACCAAAAAGACCTCCTCAACACA
GGTGGTACATTTTTTTCTGGAATAGCCCAATATTACACTGTGACGACAAA
TGAGCATTCAATTTAGCGCGTTTTCAGCAAATATAAAAGTAACAATAGCA
ATCATCCAGTATCTTAGATGACTGCCGTTCTAATCAAATCACAAATAAGA
AACAAAGAAAGATTCAATTAAAGAGAGCCGTCTTGGAAGATATTAAAAAA
CTTAAGTTTTGTGAAAAGTGCACCATTTTCTAAAATTTCTTTCTATGTCT
TCTTATGTCTCTCCTCGTCTGCATTATTTTAACAGATTCGATAAAGGCTA
GCAATAACACTTCAATACCTTTTTTAAGAGGGAGTTTTAAATCACTTTTT
TAAATCCCATTCCCTACATACAGGTGAGCACGATATCCGTAGCAAAAGTG
GCAATGAACAGAAAATGGAAGTCGCTGAAATCATCATGCATCCTGGATAT
AAATACGGAGATGTTGACAACGATATGGCTCTCATCCGATTGAAAAAGAA
GGCTTCATTCAACACTTACGTTCGCCCAGCATGTTTCCCCGATTCATCTG
TAAAATTTCCTAGTGGTGAAGAATGTTACGTGACCGGATGGGGAGCTCTT
AGGACCGGTGGTTCATCACCAAGAGTAAGTGCTGACGAATGTGTCGAGAT
TTATAACTAACTTAGTTTTTCGCCGAAAACTGAATTAAAGGGAATTAGGG
GTGGGTTTACATCTGAAGGGGAGATTCGATTGAGACACCCTTTGTCGAAA
ACAATGCAGAACATAAATAAAACAAAAGCTCAAAATGACTTAAACGAATT
CTTTTATAAAGTTAATCGACCTTCCCCTAGTTATTGCAATTTTTACAAGA
GGTTGGTTTGGGTATCTCTTATGACAAAGGTCGTAACGAGGAGAAGATCG
ATTAAGATCTTGTTATGTATCGTATTATTTCAATTATATTTCTTAATCGA
TTCTCTCCTAGATGTAAACATGCTTACAGTAAGAAAAACATAATGACTTT
TAAACCCAGATAAACTCGTACCTAATTCCCTTTTGTAGCGTTAGAGTAAA
AGGTACAAAGTCACAAGAAGATGGTGATGAAATCAGTTTAGGTGACTTCT
CTGTCGTATGCTAGGGACCTGTTAGCAAGTGTGACCGCATTAACGAATTA
ACAAATGGTTTTATCTGGGATTATCTATCAGTAAGACTGAAATGGATTTG
ATTTTCTTTCATCCAATAGATCTTGCAACAAGCCAAAATTCCGCTTGTTC
CACAACACGAATGTCAAAGAGCTATGGGAAACGATATCACAAAGAACATG
TTCTGTGCCGGATATGCCAACAAAAGAATCGACTCCTGCCAAGGAGATTC
CGGTGGTCCACTTGTCTGTAAAAAGCGAACTTCAACTGGGCAAGATGTTT
GGTATTTATGGGGAGTCGTTTCATGGGGTATCGATTGTGCCTCACCAGGA
TATTATGGTGTCTACTCCAGCATTGAGAACATGGGATCATGGGTCACAAA
CACCTTGAAAAGCCGAAGAACTTAA Coding sequence (CDS) from alignment at sc0000103_pilon:868601..873325- >XLOC_034219 ID=XLOC_034219|Name=XLOC_034219|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2262bp|location=Sequence derived from alignment at sc0000103_pilon:868601..873325- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGTTATCTTTGGTTCTTATTGCATCCGCACTTGTTGTTGCTGTTTC
AGCAGATGAGGTTATCTTTGGTTCTTATTGCATCCGCACTTGTTGTTGCT
GTTTCAGCAGAATGTCATCAAGACAAGGCCCAATTTTGCTTGGGATGGAA
ATTAGCTGGATATTGCAAGAGAAGCAGCAAACATCACACATGGATGAAAG
AACATTGTGCTGATACGTGTGATTTTCCTTGCCCTACCACTCAACCACCA
ACTTCGGAATGTCATCAAGACAAGGCCCAATTTTGCTTGGGATGGAAATT
AGCTGGATATTGCAAGAGAAGCAGCAAACATCACACATGGATGAAAGAAC
ATTGTGCTGATACGTGTGATTTTCCTTGCCCTACCACTCAACCACCAACT
TCGGGCTGTGCGGATAAAAATGAAGCATATTGCAAAAAATATGCTCTGAA
TTGTTTCCGTGATGGTTGGAAAGATTATTTGAAAGTTCAATGCCCCAAAA
CTTGCAAGGCTTGTGGAGGCTGTGCGGATAAAAATGAAGCATATTGCAAA
AAATATGCTCTGAATTGTTTCCGTGATGGTTGGAAAGATTATTTGAAAGT
TCAATGCCCCAAAACTTGCAAGGCTTGTGGAGGTGCGGCCACAACCCCAC
AAGGTCCCTTACCAACACAAGCATCTGGACAATGTGGAGTCAAAGGCGAT
GGTCACACCCGTATTGTTGGTGGTACTAATGCACGACCTGGTGATTGGCC
GTGGCAGGTGCGGCCACAACCCCACAAGGTCCCTTACCAACACAAGCATC
TGGACAATGTGGAGTCAAAGGCGATGGTCACACCCGTATTGTTGGTGGTA
CTAATGCACGACCTGGTGATTGGCCGTGGCAGGTACAAATCGATTTGAAC
ACTGACTGGGGGCGTTATTGGTGTGGAGGCACCTTGATCAATGACGAATG
GATTGTCAGTGCTGCTCATTGCTTTGAAGATGATACCAGAGCGAGAAACT
ATGACATCTATTTGGGTACAAATCGATTTGAACACTGACTGGGGGCGTTA
TTGGTGTGGAGGCACCTTGATCAATGACGAATGGATTGTCAGTGCTGCTC
ATTGCTTTGAAGATGATACCAGAGCGAGAAACTATGACATCTATTTGGGT
GAGCACGATATCCGTAGCAAAAGTGGCAATGAACAGAAAATGGAAGTCGC
TGAAATCATCATGCATCCTGGATATAAATACGGAGATGTTGACAACGATA
TGGCTCTCATCCGATTGAAAAAGAAGGCTTCATTCAACACTTACGTTCGC
CCAGCATGTTTCCCCGATTCATCTGTAAAATTTCCTAGTGGTGAAGAATG
TTACGTGACCGGATGGGGAGCTCTTAGGACCGGTGGTTCATCACCAAGAG
TGAGCACGATATCCGTAGCAAAAGTGGCAATGAACAGAAAATGGAAGTCG
CTGAAATCATCATGCATCCTGGATATAAATACGGAGATGTTGACAACGAT
ATGGCTCTCATCCGATTGAAAAAGAAGGCTTCATTCAACACTTACGTTCG
CCCAGCATGTTTCCCCGATTCATCTGTAAAATTTCCTAGTGGTGAAGAAT
GTTACGTGACCGGATGGGGAGCTCTTAGGACCGGTGGTTCATCACCAAGA
ATCTTGCAACAAGCCAAAATTCCGCTTGTTCCACAACACGAATGTCAAAG
AGCTATGGGAAACGATATCACAAAGAACATGTTCTGTGCCGGATATGCCA
ACAAAAGAATCGACTCCTGCCAAGGAGATTCCGGTGGTCCACTTGTCTGT
AAAAAGCGAACTTCAACTGGGCAAGATGTTTGGTATTTATGGGGAGTCGT
TTCATGGGGTATCGATTGTGCCTCACCAGGATATTATGGTGTCTACTCCA
GCATTGAGAACATGGGATCATGGGTCACAAACACCTTGAAAAGCCGAAGA
ACTTAAATCTTGCAACAAGCCAAAATTCCGCTTGTTCCACAACACGAATG
TCAAAGAGCTATGGGAAACGATATCACAAAGAACATGTTCTGTGCCGGAT
ATGCCAACAAAAGAATCGACTCCTGCCAAGGAGATTCCGGTGGTCCACTT
GTCTGTAAAAAGCGAACTTCAACTGGGCAAGATGTTTGGTATTTATGGGG
AGTCGTTTCATGGGGTATCGATTGTGCCTCACCAGGATATTATGGTGTCT
ACTCCAGCATTGAGAACATGGGATCATGGGTCACAAACACCTTGAAAAGC
CGAAGAACTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:868601..873325 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 826-1131:307 |
| Aaloc | 577-825:1151 |
| Aaloc | 442-573:2120 |
| Aaloc | 319-441:3160 |
| Aaloc | 205-315:3487 |
| Aaloc | 58-201:4271 |
| Aaloc | 1-54:4726 |
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