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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:877830..881018- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034218 ID=XLOC_034218|Name=XLOC_034218|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3189bp|location=Sequence derived from alignment at sc0000103_pilon:877830..881018- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAATACGATAAAGAGATGTATTTGAGCAAAGAGTATCAACATTG
GATCAAAAGTAGAACCATTTTTACATGGCTTGCATTCAGTATGATACTTC
TCTACGCAATGGAGCAACAATGTACCAAGTACTTTTTAATGTACTACATT
CAAGATCGATTTGGATTGACTGAACACAATGCTGTCATCTTTTACAGTAT
TTCGGAAGCTATCTATGCTATTGCACAAATCACTGGTGGTATTGTATTAG
GCAGATATTCAGATCGCACTCGTAATATGAAAAAAGTCGTTCTTATTGCA
ATGCTTGTTTCCTTTGTTGGTAATACCTTTTACGTGTGGCATGTTAACCT
TTTTCTTGTGGTTATTGGAAGGGCTTTGATGGGATTTACTGAATGTGTGA
ACACAGCTGTCGTAGGTAAGTTTTTTTCTTATTTGCTGGTCTATTCACCC
GGGGGAAAGAGCACTCGATTTCTAAACGAAGACATTTATTGTGTGTGCCA
CCAAAAACTGGCTTTCAAAATCGGACCCTTACAGTGTAGCCTTTGAGCAA
TAAAAAGGAAACATTACAGTGCATTTTACCGAATGTTTCTGACCTTTACA
GTGTAGTTTGAATTGATATCTTATTTTGCTGAAACCACCTGAAAATGAGC
CGCATATGTCGCGACATAATGTGCAAAACAAATTTAACAAATGTACATCC
TTACAGTGCATTTCAAGGGTCCCGACAAACCGGCACATGCCGTGGGCCAG
ACCATATAAGTCCCCCCTGGGTCTATTTGTAGGAGGTCAAACCCCATGAT
CTTTCACGGTACACGACAACATATGCTTAGTTGGGGATAGAGAAAGGATT
TTAAAGGGCTCTGCCCATAGTGTTTTTGCTTTCTATTTTTCACATTTAGA
ATGTTACACATTTTCTGTCGGGCACGAGGAGGGACAAACAAAATAAAAAA
ATCAAAACGAAATAAACAAATCAAAACTAAATAAAAAAAGAAGAAGAAAA
TAAAAAACAAAAACAAAATAAAAAACAAAAAGAAAAAGAAAAAAAGAAAA
ATAAAATAATAAGAAAAAACAAAATAAAAAAAGAAAAACGAAATAAAATA
TAAAAAACAAAATGAAAAATCAGCAAATAAAAAAACATAGAATAGAGAAT
CAAAGATGATGAAATGAGGATTGTTGTTTTTCTTGCTCATCTTGTTCATC
TAGCATGTTCTGTGAATCTTTTAGGACGCTAAGAAGAAAGGCAAATCTAT
TTTGTTATGATTATGGGACTCCTTTTCGCCCAAGGAATAAAGACGAGGAG
GGAGAAAAAGATGAGCAATCTCTCATAACGAGATACGTTAACAATGGTCA
TACACATACGAGGCAATAATTGGGAGGGAATGCAGCTTTGAAGTTTCTGC
ATACACGTGCATGAGAAGACGCCATCTTGTTTCTAGAATAAACATAAACT
CTAGATCACCACTTTCGGTTTCTTCGAGTAACACGCAGGCGCGCATGCGC
AAAATAACTTTTTAATTTTTGCTTTGTCTTTTTTATTTAGTTTTTTCTTT
TTTTTTCACTCTGTTTTTCTTTTTCTATTTTGTTTTTCTTTTTTATTTGC
TTTTCTTTTTTTATTTTCTTTTTCTTTTTTTATTTCGTTTTTCTTTTTTT
ATTTAGTTTTTCTTTTTTTTATTCTGTTTTTCTTTTGTTATTTTGTTTTC
TTTTTTTATTTTGCTTTTTTCCTTTTTTTTTGTTTTTCTTTCGGCCACCG
TAATTTCGTAGACTTTAAAGAGAACGATTTCTGATAGAAAGAAGTTGTTG
CGCGGTAGATTCGCTGGAGATGGATGTCTAAAATGGATATTCGAAAAGGG
CTAATGAAAAATTATTGGCAAGAGATATTGACTTCAATTCAAATAAAAAA
CGGATGACAGATGTCACCATAAGGATAAGGTATTCAGAAAAAGATTCCAA
GAAGGGCGTGGTTAACATTTGACAGAGGGAAATTCCCCCAGATGGGTATT
CAACTTACTTTTATAAGTGAAATCTACTCATCTCGTCTGCCGACTCGGGA
AATGACTGTTGATCCCAAACCAAAAAAAACAGATGCAAGATGACGAGTGT
AAAAACCATGCCTACCAAATAAGAAAGTCCAAAAAAGCTTTTTTTTTGCA
CAACCTTAAAAGTCGATCTCTCCTATACTGAAATCATGGTGGTATAGCAG
ATAGATGAATGAATAAATAAATGAATGTCAATAATTATTTATATTTTCTA
GGTGAGCTAAGACGGGGATACAACGATGAACCAGCTAAAGGGAGATCTGT
CATCACCTGGTATGAGATAGCTTTTCAAGTTGGCCAAAACATTGGAGCTG
GACTTCCTGTGCTTTTCACAACCGTGAATCTCAAAATAGGATTCTGGAAG
CTTGACCAATTAAACATGATGAATTTCATTCTTTCCATATTTTGTCTGAT
CGTTGCCATCATCAGTTTTTTCAAGGCTATAGATTTATCAAAAGAGCTAG
ACATTATAAAGAGTAAATATGTGGTCTCGAAAGACGACAATGAAATGAAC
GAGAATGGCGTCGAAAAGACGAGCAAAAATTTAATGAAATGGTCAGAGCT
CTTTCAAATAGATATCATTTTGCTCTGTCTTATATATAGTCTTGCACGAT
ATGCAGTCGGAACATCAGTTTCTAGCCTGACGATCTTACTTCCATTAAAG
TACCATTGGTCATTGAATGACATGTTGGTTTTACTCATGTGTACAAATTG
TGCAACGTCATTGACCATTATAGCTCTGGTAAAAATTGGCCTCCTCAAGA
ATCAAACTCGAAGTTTTTATTTGTACATCTTATCAATGGTTTTATGCTCG
GTAATTGTAACATCGCTGATGCTCACAGAAATTGGATTGTTAACAAGTTT
CGCCAAACAAGCTGTGTTTTTTGCTTTTTTAACTGCTTCAAAGAACTTTT
TAGCCAGTCTAACTAAAATAACTAACACTGTATTGTTGCTTCAATTAGTA
AAACCCCAAGATAGTGGTTTTATATTGGGAGTAAGAACAGTTGCTGGTAC
TTCATTCAAAGGGTTGGCTTTTCTGTTATCATCAATTTCTTCTAAATATC
CCGATTATCACTCACCCGGATTGGCGCTTGTCATCCTGTTGACTGTTGTC
CTCATCCTTTATAGAAGGAACGTACATCTTAAAAATTAT Coding sequence (CDS) from alignment at sc0000103_pilon:877830..881018- >XLOC_034218 ID=XLOC_034218|Name=XLOC_034218|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2706bp|location=Sequence derived from alignment at sc0000103_pilon:877830..881018- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAATACGATAAAGAGATGTATTTGAGCAAAGAGTATCAACATTG
GATCAAAAGTAGAACCATTTTTACATGGCTTGCATTCAGTATGATACTTC
TCTACGCAATGGAGCAACAATGTACCAAGTACTTTTTAATGTACTACATT
CAAGATCGATTTGGATTGACTGAACACAATGCTGTCATCTTTTACAGTAT
TTCGGAAGCTATCTATGCTATTGCACAAATCACTGGTGGTATTGTATTAG
GCAGATATTCAGATCGCACTCGTAATATGAAAAAAGTCGTTCTTATTGCA
ATGCTTGTTTCCTTTGTTGGTAATACCTTTTACGTGTGGCATGTTAACCT
TTTTCTTGTGGTTATTGGAAGGGCTTTGATGGGATTTACTGAATGTGTGA
ACACAGCTGTCGTAGATGATGAAATACGATAAAGAGATGTATTTGAGCAA
AGAGTATCAACATTGGATCAAAAGTAGAACCATTTTTACATGGCTTGCAT
TCAGTATGATACTTCTCTACGCAATGGAGCAACAATGTACCAAGTACTTT
TTAATGTACTACATTCAAGATCGATTTGGATTGACTGAACACAATGCTGT
CATCTTTTACAGTATTTCGGAAGCTATCTATGCTATTGCACAAATCACTG
GTGGTATTGTATTAGGCAGATATTCAGATCGCACTCGTAATATGAAAAAA
GTCGTTCTTATTGCAATGCTTGTTTCCTTTGTTGGTAATACCTTTTACGT
GTGGCATGTTAACCTTTTTCTTGTGGTTATTGGAAGGGCTTTGATGGGAT
TTACTGAATGTGTGAACACAGCTGTCGTAGGTGAGCTAAGACGGGGATAC
AACGATGAACCAGCTAAAGGGAGATCTGTCATCACCTGGTATGAGATAGC
TTTTCAAGTTGGCCAAAACATTGGAGCTGGACTTCCTGTGCTTTTCACAA
CCGTGAATCTCAAAATAGGATTCTGGAAGCTTGACCAATTAAACATGATG
AATTTCATTCTTTCCATATTTTGTCTGATCGTTGCCATCATCAGTTTTTT
CAAGGCTATAGATTTATCAAAAGAGCTAGACATTATAAAGAGTAAATATG
TGGTCTCGAAAGACGACAATGAAATGAACGAGAATGGCGTCGAAAAGACG
AGCAAAAATTTAATGAAATGGTCAGAGCTCTTTCAAATAGATATCATTTT
GCTCTGTCTTATATATAGTCTTGCACGATATGCAGTCGGAACATCAGTTT
CTAGCCTGACGATCTTACTTCCATTAAAGTACCATTGGTCATTGAATGAC
ATGTTGGTTTTACTCATGTGTACAAATTGTGCAACGTCATTGACCATTAT
AGCTCTGGTAAAAATTGGCCTCCTCAAGAATCAAACTCGAAGTTTTTATT
TGTACATCTTATCAATGGTTTTATGCTCGGTAATTGTAACATCGCTGATG
CTCACAGAAATTGGATTGTTAACAAGTTTCGCCAAACAAGCTGTGTTTTT
TGCTTTTTTAACTGCTTCAAAGAACTTTTTAGCCAGTCTAACTAAAATAA
CTAACACTGTATTGTTGCTTCAATTAGTAAAACCCCAAGATAGTGGTTTT
ATATTGGGAGTAAGAACAGTTGCTGGTACTTCATTCAAAGGGTTGGCTTT
TCTGTTATCATCAATTTCTTCTAAATATCCCGATTATCACTCACCCGGAT
TGGCGCTTGTCATCCTGTTGACTGTTGTCCTCATCCTTTATAGAAGGAAC
GTACATCTTAAAAATTATGTGAGCTAAGACGGGGATACAACGATGAACCA
GCTAAAGGGAGATCTGTCATCACCTGGTATGAGATAGCTTTTCAAGTTGG
CCAAAACATTGGAGCTGGACTTCCTGTGCTTTTCACAACCGTGAATCTCA
AAATAGGATTCTGGAAGCTTGACCAATTAAACATGATGAATTTCATTCTT
TCCATATTTTGTCTGATCGTTGCCATCATCAGTTTTTTCAAGGCTATAGA
TTTATCAAAAGAGCTAGACATTATAAAGAGTAAATATGTGGTCTCGAAAG
ACGACAATGAAATGAACGAGAATGGCGTCGAAAAGACGAGCAAAAATTTA
ATGAAATGGTCAGAGCTCTTTCAAATAGATATCATTTTGCTCTGTCTTAT
ATATAGTCTTGCACGATATGCAGTCGGAACATCAGTTTCTAGCCTGACGA
TCTTACTTCCATTAAAGTACCATTGGTCATTGAATGACATGTTGGTTTTA
CTCATGTGTACAAATTGTGCAACGTCATTGACCATTATAGCTCTGGTAAA
AATTGGCCTCCTCAAGAATCAAACTCGAAGTTTTTATTTGTACATCTTAT
CAATGGTTTTATGCTCGGTAATTGTAACATCGCTGATGCTCACAGAAATT
GGATTGTTAACAAGTTTCGCCAAACAAGCTGTGTTTTTTGCTTTTTTAAC
TGCTTCAAAGAACTTTTTAGCCAGTCTAACTAAAATAACTAACACTGTAT
TGTTGCTTCAATTAGTAAAACCCCAAGATAGTGGTTTTATATTGGGAGTA
AGAACAGTTGCTGGTACTTCATTCAAAGGGTTGGCTTTTCTGTTATCATC
AATTTCTTCTAAATATCCCGATTATCACTCACCCGGATTGGCGCTTGTCA
TCCTGTTGACTGTTGTCCTCATCCTTTATAGAAGGAACGTACATCTTAAA
AATTAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:877830..881018 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 418-1353:937 |
| Aaloc | 1-414:3190 |
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