XLOC_034217 (mRNA) -

Overview
NameXLOC_034217
Unique NameXLOC_034217
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000103_pilon:890159..891605-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034217 ID=XLOC_034217|Name=XLOC_034217|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1447bp|location=Sequence derived from alignment at sc0000103_pilon:890159..891605- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCGCAATCCAAGAGATGTTTGCCAATCAGCTTTCAATCACTTTAA AACACTCCATGATGATTTTTCTGGAACCTTGCAAGATGTGGTAAACCTAA TGACCAACGATGTGGGAAATGCATTCGGTCCATATTTCAAGCATATTTTG GGATACTGGAATCGTCGTTTGGATGAAAACTTACTGGTCATTTCCTATGA AGAAATGAAAAAAGATTTCTCTGGTCACATCAAGAAGATATCTGATTTCT TAGACATTGAAATTTCAAATGAGGATTTGGTTGCTTTCACCAATCGTTTT TCTTTTGAAACGATGAAAGCAAATGCTGAAAAAATGCTTTCGTTCAATGC TAGCCAAGTTAGTAACTTTAGTACCTTATTTTTCATAATTAAATCTGTTT TGTGTCTAATCCAGGGGTATCATGTATACAGGAAAAAATCACATCAGATC ACACGGGTGTAAAAACTTAAATTCCGAAATCGAAATTTTCGAAAATCAAA TTTCGCGTGTAATTTTTTAAAACTGATTAAGTGTGATTTTCTTTGAATTG TGATTTTGATATCACTGCGGAATTTTCCAAACATTTGATTGCACTTTTTA ACCTTGACGTGTGAAATCGAAATAAGCACTCATAACCCACACAAAAAAGT TTTAATGAAAATCACATGTGTCATTTCTAATTTCCGCTGACGAATTAAAT TTTGAGCGTACGTATACGCAGGGTGTTACCAGTGCTCTTGAAACAAATAC GGCGACTTCACTGAGAACGTAAAGCAAATCTTAATTTGAATTTGTATAAG TGCTTAAAGGCTTGGGGACACGAGAATTTTTTTTTGAGTTGGTGCAATTC AACATGCTCCATCCCACCAACACAAAAAAAAGTAATCTTTGCTCTTCATC TTTGGTACTTTTGATAGTGCTTAGACTGACACATGCACGATAAAACTCTG ACACTTGGTTGCCACAGGCTATATTTCAAACAAGACTCAAGATGCCCGCA ATATAAAGATCTTAGACCGTCGCTATGATCATTTTTCTTTGTGTTGAATA ATCGATGAATAGAATCGCTATTCGTCTTCACAGGTCGAAATTCGATTACG TCATCAATTTTGAACCTCCTCCGATTTCGATGACTCCAATATACAATTTT GTACCCTGAGCAACTTTCAACACTTTTTAATATCATTGATGGACTTAGTA TTTCCAATAAAGGCTTGTCTTAAAAGAACAACGTCGTGACTAAATTATTC ATAACAAAACTTTTTTTATTACTATGTAGAAAAACTACAGTTCAACTGTT GACGCTGCCTTGAAAGGAAAAACAATGTTTAACAAAGGACAAATCGGATC ATGGAAGGCTTTGTTTACACCAGAGATGACTAAACAAATGGAAGAATGGG AAACAAAATGGCTGAAAGATACCGATCTCAAATTAATTTATGAATAG

Coding sequence (CDS) from alignment at sc0000103_pilon:890159..891605-

>XLOC_034217 ID=XLOC_034217|Name=XLOC_034217|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1050bp|location=Sequence derived from alignment at sc0000103_pilon:890159..891605- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATCGCAATCCAAGAGATGTTTGCCAATCAGCTTTCAATCACTTTAA
AACACTCCATGATGATTTTTCTGGAACCTTGCAAGATGTGGTAAACCTAA
TGACCAACGATGTGGGAAATGCATTCGGTCCATATTTCAAGCATATTTTG
GGATACTGGAATCGTCGTTTGGATGAAAACTTACTGGTCATTTCCTATGA
AGAAATGAAAAAAGATTTCTCTGGTCACATCAAGAAGATATCTGATTTCT
TAGACATTGAAATTTCAAATGAGGATTTGGTTGCTTTCACCAATCGTTTT
TCTTTTGAAACGATGAAAGCAAATGCTGAAAAAATGCTTTCGTTCAATGC
TAGCCAAATGTATCGCAATCCAAGAGATGTTTGCCAATCAGCTTTCAATC
ACTTTAAAACACTCCATGATGATTTTTCTGGAACCTTGCAAGATGTGGTA
AACCTAATGACCAACGATGTGGGAAATGCATTCGGTCCATATTTCAAGCA
TATTTTGGGATACTGGAATCGTCGTTTGGATGAAAACTTACTGGTCATTT
CCTATGAAGAAATGAAAAAAGATTTCTCTGGTCACATCAAGAAGATATCT
GATTTCTTAGACATTGAAATTTCAAATGAGGATTTGGTTGCTTTCACCAA
TCGTTTTTCTTTTGAAACGATGAAAGCAAATGCTGAAAAAATGCTTTCGT
TCAATGCTAGCCAAAAAAACTACAGTTCAACTGTTGACGCTGCCTTGAAA
GGAAAAACAATGTTTAACAAAGGACAAATCGGATCATGGAAGGCTTTGTT
TACACCAGAGATGACTAAACAAATGGAAGAATGGGAAACAAAATGGCTGA
AAGATACCGATCTCAAATTAATTTATGAATAGAAAAACTACAGTTCAACT
GTTGACGCTGCCTTGAAAGGAAAAACAATGTTTAACAAAGGACAAATCGG
ATCATGGAAGGCTTTGTTTACACCAGAGATGACTAAACAAATGGAAGAAT
GGGAAACAAAATGGCTGAAAGATACCGATCTCAAATTAATTTATGAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_034217XLOC_034217-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000103_pilongenomesc0000103_pilon:890159..891605 -
Properties
Property NameValue
Aaloc358-525:169
Aaloc1-357:1448