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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:917005..919631- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034216 ID=XLOC_034216|Name=XLOC_034216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2627bp|location=Sequence derived from alignment at sc0000103_pilon:917005..919631- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTACAACTTATTTTCGAAATGGAGTGCAACACTTTTACTTTGCAC
TATTCTGTCGTCACTGGAGAAAACTGAATCACATGGAAGTCATCAACAAG
GACAACATAATCGCATGGATAGCAGACACGTTCATGATGTAGAGTAAGTG
TTTCTATTGTAATTTTATTCCTGTATCAAACCAATAACTTGGTCAAATTC
CAATACGGAGCTAAATACGAGTCCTCAAACCGCGCTTCAAACAACGTTAT
TAACTCTGCTTGTTGATATTTAGGCCCTTGGTGATTATTTTAATGACTAG
GTATAAACATCTTTTCTTTTTTATTTTGTTGGAAAAACAACCCTTATAAG
CTTTGCAAATCAAACAATCTTCTGATTTCAGATAGAGAGGATATCAACCA
GAGAGTAGGGGAGTAGGGGCAATCAAATATAAATTATCAAATGCTGTTTC
CATTATCATCGCAATGAATTAACCATTACATTTCAACAAAACAACATGAG
GTTTTTAAAATACTTATCGGTGAAGATTTTTAATTCGTTACAGTAATTAT
GCGCAAGCTTTAGTGAGAGCAAGAAACTAATTGAGGAAAACACGATTTTA
AACATTTTAAAACAATGAGCATGATAATTTAATAGCCGCAGCTATTAATA
GCTTTGCCGCAATTCGGTTGCTACACAATACACCGTACACGTTTTTTTTA
AGAAACACACTTTTAAGAAACATGAGGCTCAGAATGTCTAAAAACTAAAA
AACATCTAAGAAACATGCTGAGGCTGAGAATGAGAAAATAACATTTTTTA
ATTCGGTTTTTTTAAGAACCTTCCAATCAAAACAAATGTTTTTTTCTTTG
CATGAAAAATAGGCTGACTATCTCAAAAAGTTTAGAAACGTGTAAGAAAC
ATTTAAGGCTCAAATAGTCAAAAGGCCGATTTCTTAAGAAACATCGAGGC
TGCTCGGTAAAACTCGTTTCTTAAAAAAACGTGTATGTAAGGCTCCCAGC
GAAGAAGGTCAGGATGGTAGAGGAGGCGATCGATTCGAGTTGATACTGTT
GTACTGATACTTTAATTTTTATAAGAACAAATTATATAATAACGCAAGGC
TTTGATAGCCAAAATATCAGGAACAAGTTGCGAAAATTTTAAGGCTTCGC
AGGCTCTTTCTTTCATCTGGTTGGCTTATCCCTAATAATTATCATTATAT
AATTTCAATCAATAATCTATCAGTTATTTCGGATAAATATGATAATGCTT
AAGTTTTACCAACTTTTCAAGCCTAGTCATGCTTATAACCCTTATAATCA
AGATCATGGTCGAAATCTATTGAGAATTAAGCTTATTTCCTCGTTTTTCG
AAATTTGGAGTTCGGGCGAGAAAGTCGATTTTGGGCCATCTCTCAAATTT
AATCAGATATTTCAATTTGGTTCGGGTTTATAGACCTCCAGGCTATATTA
TGAGCCTTATTTGACCATTTTTGAACATTTGGATCCTCAGATCCTAAGGT
AAGTAAGTGTTTTAAAGTCTAATGTTAAAACTCAGAGTTAAATTTCTACC
CTTCCAACCTACTTTACAGCACTTACAAATCGATTGTGGTTTCAAAACTT
CCCGGTGGATTTTCCTTTTTTCTCAAATATTACGACCATGATTGTACTGT
TGCACCTATATAAGTGTACTCTGTACCAGGGTGTATCTTAAGTTTATCAC
TTCGTAGTACACTCTGTGCGCATTGTTTGTTTGATGAAAAAAATTCCCGT
ACGGAGAACTCTGCGATGAAGTATGATTTATAAAATAGCAAAACTTCTCT
TATCGCCTCCTCTCTCTTACCAACACTCCATCACAGCGGTCGGTTTGAAA
AATCTCAAATGAGAAAAGACAACAACAGACCCTCTAAAGCAATGAATTTT
GAAATTAGCTGTAGATACTGGGTCTGTGTACAGACAACTATAAGTGTGGC
TTAAAGTTGTACTCCTTCAAAATTACAACACGTCAACTTTTTCTCCACCA
ATTTCCAGGCACATCAACGAGCATTTACGAGATCAAATTGACGTCAACCA
ACAGAAACCGATGAGTAACGAAGATTTACAGTTCCATTATTTCAAAGTTC
ACGATAGTGATAATGACGATAAACTTGATGGTATTGAATTAGCGACAGCA
ATGGCGCATTACCACGATGAAGAACATGCAGAAAAACCTGAAGACTATAC
TGAAGAAGTAACTTTCGATTCATCCTTTTAGTGATTTTAAAATTCAACAG
ATACCGCATCTTCTTTCTCGAAGTTGCTTTCCTTGATGCTTGCAGCTCTG
ACTTAGAATATCAATTGCGAAGACTCCAAATATGTAGAGATATATAACTT
TAAAATGATATCGACAGTATCGAAAGCGATCATTCCTGCAATCTTTTTTA
AACTTCCATTTGATTCTTAGACATCTCTATTTATCAATTCAGTTCATTTA
TAGAATTGATGGCTGACATGCTGAAAAAAAAAGATTTTAAACAACTTCTT
TTGTTTCCAGGAATTAGCGAGTATGGTTGATCAAATTTTAGACGAAGATG
ATTTAAATAAAGACGGATACATTGACTACCCAGAATTCATTGCTTCGCAA
CAACGTGAAGAAGCTGTGACTAAATAG Coding sequence (CDS) from alignment at sc0000103_pilon:917005..919631- >XLOC_034216 ID=XLOC_034216|Name=XLOC_034216|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=918bp|location=Sequence derived from alignment at sc0000103_pilon:917005..919631- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTACAACTTATTTTCGAAATGGAGTGCAACACTTTTACTTTGCAC
TATTCTGTCGTCACTGGAGAAAACTGAATCACATGGAAGTCATCAACAAG
GACAACATAATCGCATGGATAGCAGACACGTTCATGATGTAGAATGGATT
ACAACTTATTTTCGAAATGGAGTGCAACACTTTTACTTTGCACTATTCTG
TCGTCACTGGAGAAAACTGAATCACATGGAAGTCATCAACAAGGACAACA
TAATCGCATGGATAGCAGACACGTTCATGATGTAGAGCACATCAACGAGC
ATTTACGAGATCAAATTGACGTCAACCAACAGAAACCGATGAGTAACGAA
GATTTACAGTTCCATTATTTCAAAGTTCACGATAGTGATAATGACGATAA
ACTTGATGGTATTGAATTAGCGACAGCAATGGCGCATTACCACGATGAAG
AACATGCAGAAAAACCTGAAGACTATACTGAAGAAGCACATCAACGAGCA
TTTACGAGATCAAATTGACGTCAACCAACAGAAACCGATGAGTAACGAAG
ATTTACAGTTCCATTATTTCAAAGTTCACGATAGTGATAATGACGATAAA
CTTGATGGTATTGAATTAGCGACAGCAATGGCGCATTACCACGATGAAGA
ACATGCAGAAAAACCTGAAGACTATACTGAAGAAGAATTAGCGAGTATGG
TTGATCAAATTTTAGACGAAGATGATTTAAATAAAGACGGATACATTGAC
TACCCAGAATTCATTGCTTCGCAACAACGTGAAGAAGCTGTGACTAAATA
GGAATTAGCGAGTATGGTTGATCAAATTTTAGACGAAGATGATTTAAATA
AAGACGGATACATTGACTACCCAGAATTCATTGCTTCGCAACAACGTGAA
GAAGCTGTGACTAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:917005..919631 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 343-459:118 |
| Aaloc | 145-342:619 |
| Aaloc | 1-141:2628 |
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