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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000348_pilon:95217..101352- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034188 ID=XLOC_034188|Name=XLOC_034188|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6136bp|location=Sequence derived from alignment at sc0000348_pilon:95217..101352- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGATACACACAAGTCGGGTTTTGATATTCTTATTATTTGTGATATG
GATTGGAGGAATGTTATATTTTTTCACGAGTAGTTCTAATGCTCCACCGC
CGCTATCACCAGAAGAGCAAGCAAGGCTCATTGCGCTAGGAAAACTTGCC
AGGGATCGTGACCACAAAGGACACAAAGAACACCATGATATTGGACATGG
TCAGGATCATCAAAAGCCTGATGAGAAAAAATACAATGTAAAGGGAAATA
TTTTTATTGCTAAAGACCCTAAAATGAGAAGTAACAATAGAGATAGTAGA
TCTTTGAAGGATTTTGATTGGCATGGCTATGTTCAACGAGGAGCTCTGAA
ACCTGGTGAAGATAAGAATGTTAGAAATGCTTATAATCAGGAAGCAAGTG
AAAAATTAGCATGGGATCGACCCATCCCAGATGTCAGAGATGCAAAGTAA
GAAAAAATCAAAGTTTTAAAAAAATCCTCAGATTTTCTCAATTCAAATAC
TGATAGGTTATTGCATTGTTTATGATAAGAAACTAGATTAAGATTGGGAT
GAATATACACTTTTTCCACCTTATGTCAGCTTCAATTTGCTGGTTACTGT
AATCATATTGCTGGCTACATCAAACAAATAACCAACAAAAAGAAGGCCGG
CTTTTGCTGGCAAATATTTCATGTCCTTTGAATCGCTTGTATGGTCACAT
ATATAATTATCTGTTAGGTGTCGAAATAAGCGTTACGATACAGATCTTCC
GACAACTACTATCATCATTTGCTTTCACAATGAGGGAAGAGCAGCTTTAT
TACGAACAGTTGTTAGGTGAGTCAGTTATATGTACCAATTCCTTTACACT
TCTCTTCAACATTATTCCTCTTTTTAAATATTTTCAAGTTTCTTTTTGAA
GACACATTTTCTTAGATAATGTCTAAGCCATTCTAATTCACGTCGACATT
CAGCTATTGCCGATGTAAATGTCAACGTAAATTTGGCTTTTGCCAACGTA
AAAGTGCTTACTGAATTAGAAAGGCTGCTTCTATCTGGTTTGCATAGGTC
TTGAAATTATCCTGGCTCAGCTCACATATGAACAATGACATCTTTTTATA
TGGTTAACCAATAATTAATTCCATAGATTTTTTGTTGATATGCCTTTTTG
TTTTGTTTTCCAGTGCTTTAAACAGATCTCCTGATCACCTACTGAAGGAA
ATTATTTTGGTGGATGACTTCAGTGATAATCGTATGAATTTTTTTTTTCC
TTCAGGCTCTTTTTGAGGTCTGTCCTGTTGTCCTGCATTTTATAAACTAG
TATTGTATAGATTGTGCTTACCTCAATTCAATCAATTACTAATATTAATT
TTCCATTTGCATTGTAATGCAAAAATCTGATATCACAGAAATTCCCCATT
TTATTATCGATTTCAAAATATCCAGAATTTGTTAAAAACAAAAGAGTTAT
GTTTTTTTTCAGCTGCTGATGGCAAGGAACTCGGAAGTATACCCAAAGTA
AAAGTTCTAAGAAATGACAAACGAGAAGGTCTGATTAGATCAAGGGTGAA
AGGAGCAGACATTGCAAAAGGAGATGTGCTGACGTTTTTAGATAGCCATT
GTGAAGAGAATGAAATGTGGTTGGAACCTCTTTTACAAGCAATCAAAGAT
GTAAGAAAAACACTTGATTTTAGGAGAAATATGTAAATTCGATCTGTGAA
GGTTGTATGAAATCAAAAGAAACAAACTATATACATATTCTAAACAGAAA
CTGACTCAATCAACACAATGCACTATAGAACATAGATTCTTTTGCATCTA
TTTGTCATCACAAGCAATTTTCAATACAAATAAAATGGAATGTTCCAGTA
AAGTAAAATTAACAATTTGGAACATTCCAATTATTTTCTAGTTCTAGGAG
CTCGTAGCAAGTTAAATATTAACCTTTACAACAGATCGTTTTGAGAGGAA
CATTCCAGGGACGTTTGTGAACGTTCACAAACGCTTGTATTGACACATAT
ACTAACCAGATCGTAATTTACACAAAATATATAAATAAAAAACATTAATA
CAAACATATAATTGGAAATCAATGTTTAAATGTTATTTTTTCCATATTTT
CAGAATCGAAAAGCAGTAGTAGCGCCTATCATTGATGTCATTGCACATGA
AACTTTTGAATACCTTAGTTCATCATCAGAGCTTCGTGGTGGTTTTGGTT
GGAATCTGAATTTCAAATGGGATTTCTTACCACCCAAGTATTTAGAAGAA
CACAGAAGAGATCGTACTGCACCAATCAAGTAAAAATTTACTAAGAATAT
CCTTTTAAAACCCTTGAATTCAACCAAAGAAACTCTATACTTTTTCACTG
TCCAGCAGTTTGAAAAAACCTCTTTATATTACAGTTGAACTCGTGTAATT
CGAAAACTCGCTTAATTTGAACAGATTATGTGGTCCCCTCAGAATTTACC
TTGAAAACCTTACAAGAAAACTCCTATAATTCGAACCCACGTAATTCGAA
TAATCGTATAAATCTAACAGATTTTTCAGTCCCATCAATAAATTTTAATC
GTTTAATTCGAATTTTTTGATTTTTGAAGCTGACAAACTCGACAATTTGT
CAATCGAACGTTTTCAATCGAACGTTTTTGACGTTAGAATTATCTTGTTT
GCCAATCAAATGTTTTCTTTTTTACATTCGATTGGAGCTCGTCCACTGCT
TTTGCCTTCCATTTCTTATCAAATTTAGTATTTCACTATTCTAACTCAAA
ATACAAAAAATTGTTCCAAAGTAAACCTGGGAAAGACTTTTTTCATCGAA
TTAGGTCACAAAGATAAAACTCCTCCGAATTACTTGAGTTCAACTGTATG
TACTTTCTATTTTATAAGAGAAATTTTTAACTTTCATTTTCCATCGTAGA
TCGCCTGCGATTGCCGGAGGATTGTTTTCAATTGATAAGAAATGGTTTGA
AACACTTGGAAAATATGACAACCAAATGGATGTATGGGGTGGAGAAAATC
TAGGTTCGTTTGCTTTTTACCCTTTACAAAAGTACTGGAATTAGGTTTTG
GAGAGCAAATTATGAGGTCTAGTAAATTTCTGTATTTAAGATTAAGGCCA
CAATATTGGCTTTCAATTTTAACTTTCTACACTTTTCTCAACTCTAAACA
CAGTAAAATTTACGAAAGTTTCTTTTTAGAAATTTCATTCCGCGCATGGC
AATGTGGTGGTGAAATGCACATCTTACCTTGTTCACGTGTTGGTCACGTG
TTTAGAGAACGTCATCCATATAAATTCCCTGGTGGTAGCATGAATGTTTT
TCAAAAGTCAGTACCTAAAATTATACATCTTTTTCACTATCATGATTCAT
CATTCCAGTCTTTAGCGTCCTGTAGATAAAAAAGATTTGTTTTTATCTCG
ATAAGCAGTACGCGGCTATAAGTAGTACAACTTCTCTGGTCCCCTGAACT
TCCTTCCTTAACCTTCTGAGTCAAAAAATATTTGGATAATAAGTAGAACG
AGGCTAAATACTACAATTTACCACTAGTTCCTTGAGAGTACTTTTTATCG
GGATTCAACTAAGTACTACATATAAAGGTTTTCATGTTTTGTTAAGTTAC
GTAACTTCCGCCATTATGACAGCAAATGTTCGATTTGTCTAAGGGATCAC
CTCTACAAGTTCGAACATTTGCTTCAATAATGGTGTAAATTGCGTAACTT
AATAAACCATGAAAAACCTCTATTGTTAATCAAAAGTATCATACTATTGT
AAACGTCGAAGGTGAAAAGTTACCTTCATTTTTCAATGTCAAGCTATGTC
TTTCCTATTCGTGGCAATAGAATAAGCATGAGTATAGAATAGTTATGTCA
ACATAATCTACGCATTTTCCATTTTCCATTTCCATTTTCATTATTTTTTT
ATTTTTGTTTCCCAGGAATACTCGTCGTGCAGCTGAAGTTTGGATGGATG
ATTACAAACGATTCTATTTTGGTGCTGTTCCATCAGCTAGATATGCTATT
TTTGGAGAGTAAGATTTTTCATTCATATTTTAAATATTAATAAAGAGGAT
TTGCCTTAAAGTGCTAGCCTACAATCTATGATTGCACATGAAAAACACTT
GACTTTGACCATTTGCATCCCTTGTGGCATCATAGTGATAATGTTGTTTA
TATCGCGCTAGATGTGGTTACTGGAGTGATTGAGTCCAAAACCCGACGCT
GTTCCCGAAATAGCTTCCAGTGTGGACTGGATAACTCAGTCGGTAGAACA
GTTGCAATAGTAATGCGAAAGTCGTGAGTTCGAATCTCACTTCAGTCCTC
AGTTTAGTAGTTCTCTACCAAACTGAGGTCAATGCACACATATATACGTG
TTGCTACTTAATTGTAAGTCTTTGATAATGATATCGTTGAATCTTGACTT
TAAATTATCTGCTTCATGCTTTAAATTCTTTTTGTTTTCATTTCGACAGT
ATTCATGAAAGAATGGAGCTGCGCAACAAGTTAGGATGTAAAAGTTTCAA
ATGGTTCTTAAATAATGTTTATCCTGAATTAAAGTAAGTAGAAATCTATT
CTAGTTCTTTACAAGCATGTTCAGTCTATTTAATACTTTTTCAATTATTG
GGACATCTATATTTGGGCTGAGTTTTACATTTCAATCTGACATAGTAGAA
TAGACGCACTGAATTTTTGTCACATGCACAAAAAAATACAGCTGAGTCTC
AAACCTCTAGAACCCCTTAAACTCAAATGTCTTCTCAACTCGAAAAATTT
TTATGGCTCCTAAAGTCAACAATGCCTTATTAACCTTACTCCATGATTCG
AAGTTTCCTCAACTTGAACAAATTTGTATTCCATGTGCGTGTTCGAGTTA
TGAAGAGACTCCAAATGTAATACATGTTGAGTTGTGCTTCAAATGAAAGG
AGGAGGGAGGGGGTCAGGGGGTCAGAATGTATATACGTTCTTTTGATTTC
CTTATGAAGAGTACCAGATAGTGACGTCATCAAATATGGCAGCTTGAAGA
ACAATGGTGAGAATTGTATGGACACAATGGGTCATCAAATTAATGAAGGT
GTTGGCATTTTCAGTTGCCATGGGCAAGGTGGCAATCAGGTAGAATATTA
AGAATTCTTCCGTCGAATCATTCAACAGAGGTCCTTTCCAATTTGGTTTG
TCCTAGTAAACAGGCAAAGAAAAAGCAGAAAAACAAAGTATCACAACACA
GATTACGAACGATTTTTGAGCAATTTTGACGAAAGACGACGAAGGAAATT
CAATTTAATATATACATTTTCATTCATAAGTCATTCTTACGATTATAGAG
GACACAACTTTTATCTCGTTTTGCAATGCGATTTCTTCTTTTGGTTTTAG
GATTGGTCTTGGACGAAACATGACCAGATTAAACACGAAGAGATCTGTGT
GACAGCGATAGGAAGCGACGAACACAGTGCTGTACTCATGAGAAAATGTG
ATAAGAACGATCGATTCCAGGTATGAGCCAAATTTACCAGTTGTACTTTT
TACCAAAGCCAGCGTGTGTTTTGATAAGTAAACTCACCTTAAATCTTACC
AAAACTAACCTTAAAACTTACCGTGACTTGGTCTGATATCGATATCCCTC
TTCTAATCCAGACACCCTTCTTTAGAGATAGGAATATTACAAAGGTCGAA
ATCGCTTATGGAAACTATATTTCTTTGCTTTAGCAGCTAGAGAGGGAAAA
ATATTTTGTCTATCAGTATTTCTGACCTTACTTTTATTCCTATCTCTAAA
ACTGGGTGTCCGAATTAGAAGAGGGATGTCGACATTAGACCAACTTATGG
TACCCAACCCAAAATAATTCTTTTCTTTATTGTATTTCTACTGCGCTTTT
CCGGGCGGGTAAATATTTTTAAACCACGGCTTTGTCATTGATTTTTTTTA
AACAAAGGGCCACTAGTTTTTTTGATTTTGACGCCTTAGGCCTTCAATTA
GCTCGTACGTAATGTAATTTTTCTTTCCCTTCTAAGAAATGGAGATATGA
AGAAGGTACACGAGCTATAGTAAACACAGGATCAAATTTATGTTTGGACA
ATTATAAGATGGGTCAAGATGTAGTTACCAATAAATGTTTAGGACAAGAT
ACTCAATTGTGGACCATTGATATGGCAAATAGTTAA Coding sequence (CDS) from alignment at sc0000348_pilon:95217..101352- >XLOC_034188 ID=XLOC_034188|Name=XLOC_034188|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3678bp|location=Sequence derived from alignment at sc0000348_pilon:95217..101352- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGATACACACAAGTCGGGTTTTGATATTCTTATTATTTGTGATATG
GATTGGAGGAATGTTATATTTTTTCACGAGTAGTTCTAATGCTCCACCGC
CGCTATCACCAGAAGAGCAAGCAAGGCTCATTGCGCTAGGAAAACTTGCC
AGGGATCGTGACCACAAAGGACACAAAGAACACCATGATATTGGACATGG
TCAGGATCATCAAAAGCCTGATGAGAAAAAATACAATGTAAAGGGAAATA
TTTTTATTGCTAAAGACCCTAAAATGAGAAGTAACAATAGAGATAGTAGA
TCTTTGAAGGATTTTGATTGGCATGGCTATGTTCAACGAGGAGCTCTGAA
ACCTGGTGAAGATAAGAATGTTAGAAATGCTTATAATCAGGAAGCAAGTG
AAAAATTAGCATGGGATCGACCCATCCCAGATGTCAGAGATGCAAAATGA
GGATACACACAAGTCGGGTTTTGATATTCTTATTATTTGTGATATGGATT
GGAGGAATGTTATATTTTTTCACGAGTAGTTCTAATGCTCCACCGCCGCT
ATCACCAGAAGAGCAAGCAAGGCTCATTGCGCTAGGAAAACTTGCCAGGG
ATCGTGACCACAAAGGACACAAAGAACACCATGATATTGGACATGGTCAG
GATCATCAAAAGCCTGATGAGAAAAAATACAATGTAAAGGGAAATATTTT
TATTGCTAAAGACCCTAAAATGAGAAGTAACAATAGAGATAGTAGATCTT
TGAAGGATTTTGATTGGCATGGCTATGTTCAACGAGGAGCTCTGAAACCT
GGTGAAGATAAGAATGTTAGAAATGCTTATAATCAGGAAGCAAGTGAAAA
ATTAGCATGGGATCGACCCATCCCAGATGTCAGAGATGCAAAGTGTCGAA
ATAAGCGTTACGATACAGATCTTCCGACAACTACTATCATCATTTGCTTT
CACAATGAGGGAAGAGCAGCTTTATTACGAACAGTTGTTAGGTGTCGAAA
TAAGCGTTACGATACAGATCTTCCGACAACTACTATCATCATTTGCTTTC
ACAATGAGGGAAGAGCAGCTTTATTACGAACAGTTGTTAGTGCTTTAAAC
AGATCTCCTGATCACCTACTGAAGGAAATTATTTTGGTGGATGACTTCAG
TGATAATCTGCTTTAAACAGATCTCCTGATCACCTACTGAAGGAAATTAT
TTTGGTGGATGACTTCAGTGATAATCCTGCTGATGGCAAGGAACTCGGAA
GTATACCCAAAGTAAAAGTTCTAAGAAATGACAAACGAGAAGGTCTGATT
AGATCAAGGGTGAAAGGAGCAGACATTGCAAAAGGAGATGTGCTGACGTT
TTTAGATAGCCATTGTGAAGAGAATGAAATGTGGTTGGAACCTCTTTTAC
AAGCAATCAAAGATCTGCTGATGGCAAGGAACTCGGAAGTATACCCAAAG
TAAAAGTTCTAAGAAATGACAAACGAGAAGGTCTGATTAGATCAAGGGTG
AAAGGAGCAGACATTGCAAAAGGAGATGTGCTGACGTTTTTAGATAGCCA
TTGTGAAGAGAATGAAATGTGGTTGGAACCTCTTTTACAAGCAATCAAAG
ATAATCGAAAAGCAGTAGTAGCGCCTATCATTGATGTCATTGCACATGAA
ACTTTTGAATACCTTAGTTCATCATCAGAGCTTCGTGGTGGTTTTGGTTG
GAATCTGAATTTCAAATGGGATTTCTTACCACCCAAGTATTTAGAAGAAC
ACAGAAGAGATCGTACTGCACCAATCAAAATCGAAAAGCAGTAGTAGCGC
CTATCATTGATGTCATTGCACATGAAACTTTTGAATACCTTAGTTCATCA
TCAGAGCTTCGTGGTGGTTTTGGTTGGAATCTGAATTTCAAATGGGATTT
CTTACCACCCAAGTATTTAGAAGAACACAGAAGAGATCGTACTGCACCAA
TCAAATCGCCTGCGATTGCCGGAGGATTGTTTTCAATTGATAAGAAATGG
TTTGAAACACTTGGAAAATATGACAACCAAATGGATGTATGGGGTGGAGA
AAATCTAGATCGCCTGCGATTGCCGGAGGATTGTTTTCAATTGATAAGAA
ATGGTTTGAAACACTTGGAAAATATGACAACCAAATGGATGTATGGGGTG
GAGAAAATCTAGAAATTTCATTCCGCGCATGGCAATGTGGTGGTGAAATG
CACATCTTACCTTGTTCACGTGTTGGTCACGTGTTTAGAGAACGTCATCC
ATATAAATTCCCTGGTGGTAGCATGAATGTTTTTCAAAAAAATTTCATTC
CGCGCATGGCAATGTGGTGGTGAAATGCACATCTTACCTTGTTCACGTGT
TGGTCACGTGTTTAGAGAACGTCATCCATATAAATTCCCTGGTGGTAGCA
TGAATGTTTTTCAAAAGAATACTCGTCGTGCAGCTGAAGTTTGGATGGAT
GATTACAAACGATTCTATTTTGGTGCTGTTCCATCAGCTAGATATGCTAT
TTTTGGAGAGAATACTCGTCGTGCAGCTGAAGTTTGGATGGATGATTACA
AACGATTCTATTTTGGTGCTGTTCCATCAGCTAGATATGCTATTTTTGGA
GATATTCATGAAAGAATGGAGCTGCGCAACAAGTTAGGATGTAAAAGTTT
CAAATGGTTCTTAAATAATGTTTATCCTGAATTAAATATTCATGAAAGAA
TGGAGCTGCGCAACAAGTTAGGATGTAAAAGTTTCAAATGGTTCTTAAAT
AATGTTTATCCTGAATTAAAAGTACCAGATAGTGACGTCATCAAATATGG
CAGCTTGAAGAACAATGGTGAGAATTGTATGGACACAATGGGTCATCAAA
TTAATGAAGGTGTTGGCATTTTCAGTTGCCATGGGCAAGGTGGCAATCAG
AGTACCAGATAGTGACGTCATCAAATATGGCAGCTTGAAGAACAATGGTG
AGAATTGTATGGACACAATGGGTCATCAAATTAATGAAGGTGTTGGCATT
TTCAGTTGCCATGGGCAAGGTGGCAATCAGGATTGGTCTTGGACGAAACA
TGACCAGATTAAACACGAAGAGATCTGTGTGACAGCGATAGGAAGCGACG
AACACAGTGCTGTACTCATGAGAAAATGTGATAAGAACGATCGATTCCAG
GATTGGTCTTGGACGAAACATGACCAGATTAAACACGAAGAGATCTGTGT
GACAGCGATAGGAAGCGACGAACACAGTGCTGTACTCATGAGAAAATGTG
ATAAGAACGATCGATTCCAGGCCTTAGGCCTTCAATTAGCTCGTACGTAA
TGTAATTTTTCTTTCCCTTCTAAGAAATGGAGATATGAAGAAGGTACACG
AGCTATAGTAAACACAGGATCAAATTTATGTTTGGACAATTATAAGATGG
GTCAAGATGTAGTTACCAATAAATGTTTAGGACAAGATACTCAATTGTGG
ACCATTGATATGGCAAATAGTTAAGCCTTAGGCCTTCAATTAGCTCGTAC
GTAATGTAATTTTTCTTTCCCTTCTAAGAAATGGAGATATGAAGAAGGTA
CACGAGCTATAGTAAACACAGGATCAAATTTATGTTTGGACAATTATAAG
ATGGGTCAAGATGTAGTTACCAATAAATGTTTAGGACAAGATACTCAATT
GTGGACCATTGATATGGCAAATAGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348_pilon | genome | sc0000348_pilon:95217..101352 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1636-1839:205 |
| Aaloc | 1516-1635:787 |
| Aaloc | 1387-1515:1177 |
| Aaloc | 1303-1383:1687 |
| Aaloc | 1210-1299:2221 |
| Aaloc | 1084-1206:2956 |
| Aaloc | 979-1080:3237 |
| Aaloc | 802-975:4034 |
| Aaloc | 616-801:4673 |
| Aaloc | 547-612:4973 |
| Aaloc | 448-543:5419 |
| Aaloc | 1-444:6137 |
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