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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000348_pilon:137021..139502+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034187 ID=XLOC_034187|Name=XLOC_034187|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2482bp|location=Sequence derived from alignment at sc0000348_pilon:137021..139502+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGcataaacaaacttttaaactgCTTGTAAATCTGGTAAAACGAACAGC
AAGTAGAGTCCCTAGAAGCTGCATTAACCAAAACCCATTAACATTTTCAA
CAAAGGCATATCCTGATTGGAGGATAAATAACATGAAGTTCTTAAATCAA
GTTGAAGctcaaaatattgatattgaATTATTCAATGAGTACAAGTTCTC
TATTGAACAGTTGATGGAGCTTGCAGGTAATTTTCATACCTTaatggtat
taaatttcgcgtgttacaaaatttcgcgattttttaggtcaaatttcgcg
aaatttaataccgtttaaatttttcaaaaatacaaaatcaagaaattaaa
tacacacgaaaaattttcaactcttttgatacttatttgttacacttagc
tactatttttgtcactagttttgttactatttttggtatgtttacacCCA
ATACGGTGTGTTTCAAGtgaaatcagtcattttcttcCTTTActcccact
ttttgaaaatgcccaatttaATGAATCGTGAAATTTAATACAAGTGAAAA
TTTTCAGTAACTGTTAATTGCCagatttaatacacgcgaaacacatttcc
tcaaaagaattttgtgaatcgcgaaattttgtaacaCGCAAAATTTCATA
CCATTAAGGTATTATTTATTTGCTATTCCCAATCTTTTCTTTGTTCTGAT
aataagaacaatagaaaattattattatacCTAAATTagcaaaaaggaaa
aatgagaaataatgaagaaaacaaCCCTATgttaaataaatttattttat
cagCCTTGTAATATTCAGATTAGAAGTATAATATAGCTTGAATCACAAGA
AATACGTCTGGCTACATTTTAAGAGATTTTTTCCCATCAAACTGGCCATA
ATTATTAACTCAATCTGATTAGCTAAGATTTAATCCCCCTTGTCATATTA
TTGGATGTGAAGGGTTTGGTAATCTAGTCGTTGGCTACCACAAtatggaa
aataaatttttcttgcttatcttttattttcttgCCTTGGGGAATATGAT
AtgggaaaaaaaaaagttatatatTGTACTTGTGACAGTAAAATATCACT
ATGATATATACAATATCACTATTTAGGAATATTATGGTACACTCAAGAAg
tattttcctatttttaggTCTAAGTGTCGCATGTGCTGTGGCCAAATCAT
TTCCGCTTGATTCATTGTTGAATGCAACAAGAAAGAATCGTATTTTCGTT
TGCTGTGGACCAGGAAATAATGGTGGCGATGGGCTTGTTGCTGCAAGACA
TCTCAGACATTTTGTATGTATAGAAACTTTATCAAGTTATACACTATGAG
CTTTTCGATTATAAACTTGAATTATACGAAATTTGTCAGAATTTAGTTTG
TTTCTTTCACTTATAGCAAATATCATTCTTTCGTTTTAAcagctcttttc
aaaattttcaatttaaaatttgTGAAACCTCTATTTTACTTTGATCGTAT
TTCTTTGCAATAAGCAATATGTCACCAgttttattttaattaattcATGC
TCCTTTTTTATAGGGTTATGATCCAGTCGTTTACTATCCCAAACGGCCAA
ACAAAGATTTATTTCGTATTTTGACCGAGCAATGCGCTAGACAGGGAATT
CCATTTTTAGATGAAATGCCCAGTTCTGCTTACATCAGTGAGAATTACAA
TTTCGTTGTGGACGCTATTTTTGGGTTCAGTTTTCGAGGGGATGTCAGAG
CACCTTTTGATATGATTTTGGAAGTGTTGAAATCGATTTCAGTTCCCATT
GCCTCAGTCGATGTTCCCTCAGGTAATATTTTTTGCATACCTTTACACAA
AGTACACAATTATTTAACGGCTTTGAAATTAACACGGGAGTAAGTAACAC
Gaatctttaaactttcttttattttttggcttttaaaaagtaacacgaaa
tgttttagtttttgttagtttCTGCTTAtcttcgtgtaataaggtatact
GTATCAGACTGTATACAACtttataaaaattacaaaaatctttgaatttt
gTACCAGCCTCGTCTTTACTattgctaatttttttctttcgaaaagcTCT
ACtcaaataccttaagtggatggctaattttttttctgacttaaaatttt
ctttcgaaaagcTCTATTCAAATACGCTTAGGTTCTATTTTTTCCTAGAT
ATTGGCTACACTTTCTGAACAAAAGTCCCCCACAAAACCGTTACATATTT
TGTACTTAACGTTGTTTCAGGTTGGAATGTGGAGAATGGAAACGCTGAGG
GAATTAATCCAGACGTTCTTATTTCATTAACAGCTCCTAAACTTTGTGCT
GCCAAATTCCGTGGTGAAAGACATTATCTCGGTGGTAGATTCGTTCCGAA
AGCTTTAGAGGATAAATATCATTTAGATTTACCGTTATTTCCTGACCAAG
AATGTGTAGTGCTACTCCCAAAGATTAAATGA Coding sequence (CDS) from alignment at sc0000348_pilon:137021..139502+ >XLOC_034187 ID=XLOC_034187|Name=XLOC_034187|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1686bp|location=Sequence derived from alignment at sc0000348_pilon:137021..139502+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGcataaacaaacttttaaactgCTTGTAAATCTGGTAAAACGAACAGC
AAGTAGAGTCCCTAGAAGCTGCATTAACCAAAACCCATTAACATTTTCAA
CAAAGGCATATCCTGATTGGAGGATAAATAACATGAAGTTCTTAAATCAA
GTTGAAGctcaaaatattgatattgaATTATTCAATGAGTACAAGTTCTC
TATTGAACAGTTGATGGAGCTTGCAGATGcataaacaaacttttaaactg
CTTGTAAATCTGGTAAAACGAACAGCAAGTAGAGTCCCTAGAAGCTGCAT
TAACCAAAACCCATTAACATTTTCAACAAAGGCATATCCTGATTGGAGGA
TAAATAACATGAAGTTCTTAAATCAAGTTGAAGctcaaaatattgatatt
gaATTATTCAATGAGTACAAGTTCTCTATTGAACAGTTGATGGAGCTTGC
AGgTCTAAGTGTCGCATGTGCTGTGGCCAAATCATTTCCGCTTGATTCAT
TGTTGAATGCAACAAGAAAGAATCGTATTTTCGTTTGCTGTGGACCAGGA
AATAATGGTGGCGATGGGCTTGTTGCTGCAAGACATCTCAGACATTTTgT
CTAAGTGTCGCATGTGCTGTGGCCAAATCATTTCCGCTTGATTCATTGTT
GAATGCAACAAGAAAGAATCGTATTTTCGTTTGCTGTGGACCAGGAAATA
ATGGTGGCGATGGGCTTGTTGCTGCAAGACATCTCAGACATTTTGGTTAT
GATCCAGTCGTTTACTATCCCAAACGGCCAAACAAAGATTTATTTCGTAT
TTTGACCGAGCAATGCGCTAGACAGGGAATTCCATTTTTAGATGAAATGC
CCAGTTCTGCTTACATCAGTGAGAATTACAATTTCGTTGTGGACGCTATT
TTTGGGTTCAGTTTTCGAGGGGATGTCAGAGCACCTTTTGATATGATTTT
GGAAGTGTTGAAATCGATTTCAGTTCCCATTGCCTCAGTCGATGTTCCCT
CAGGGTTATGATCCAGTCGTTTACTATCCCAAACGGCCAAACAAAGATTT
ATTTCGTATTTTGACCGAGCAATGCGCTAGACAGGGAATTCCATTTTTAG
ATGAAATGCCCAGTTCTGCTTACATCAGTGAGAATTACAATTTCGTTGTG
GACGCTATTTTTGGGTTCAGTTTTCGAGGGGATGTCAGAGCACCTTTTGA
TATGATTTTGGAAGTGTTGAAATCGATTTCAGTTCCCATTGCCTCAGTCG
ATGTTCCCTCAGGTTGGAATGTGGAGAATGGAAACGCTGAGGGAATTAAT
CCAGACGTTCTTATTTCATTAACAGCTCCTAAACTTTGTGCTGCCAAATT
CCGTGGTGAAAGACATTATCTCGGTGGTAGATTCGTTCCGAAAGCTTTAG
AGGATAAATATCATTTAGATTTACCGTTATTTCCTGACCAAGAATGTGTA
GTGCTACTCCCAAAGATTAAATGAGTTGGAATGTGGAGAATGGAAACGCT
GAGGGAATTAATCCAGACGTTCTTATTTCATTAACAGCTCCTAAACTTTG
TGCTGCCAAATTCCGTGGTGAAAGACATTATCTCGGTGGTAGATTCGTTC
CGAAAGCTTTAGAGGATAAATATCATTTAGATTTACCGTTATTTCCTGAC
CAAGAATGTGTAGTGCTACTCCCAAAGATTAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000348_pilon | genome | sc0000348_pilon:137021..139502 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 634-843:2273 |
| Aaloc | 373-630:1564 |
| Aaloc | 229-372:1170 |
| Aaloc | 1-225:1 |
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