XLOC_034065 (mRNA) -

Overview
NameXLOC_034065
Unique NameXLOC_034065
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000017_pilon:1846425..1847698+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034065 ID=XLOC_034065|Name=XLOC_034065|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1274bp|location=Sequence derived from alignment at sc0000017_pilon:1846425..1847698+ (Clytia hemisphaerica_ch_hm2_pilon)
CCCTTTCAATCGAAATATCAACTGTCAACCTATAAAATGGCTGACTTTAA CACTCCTAGAAAACGCAAACATAAAGgtaattattaaatatttaatAGTG TGAAATATTTGGTCTAGGAAGAAAGGTTTTGTCTGAGAAGTGctactttg ttttgaaaaccagGATAAAAATTCATGCCAATTACTAAAACGGTACTGTC CAAATTCATTTAATATTGGCCACatacaaacttttttcctaTTTCACAAA GCTCTAATGAGACTAATTTCGAGTGTAGTATAGTTTGTAGGCAGGGTTCA ATCGATGATGGAAAGTGTGGTGGAACATAGATCCCCTGTCAAAAGGGGAA ATTTCCAAACAAATCTTCTTCATgcctttcaaagtttttattgaATCTCT CATCTTGAAGTTTGGAAAATTTGcctgaaagttgaaaaaaatgtatcCAT TTAGGGATTGAACCCTGCTGCCGATTTTGTAAATTATTGACCAAATTGAT CTGAAGAGTCTGCTTTTACCTTTGTCGTTTATTTTAGATCTCACCGACTT GGTTGGCTTTGTATCGTATGTGAGTCCtccaaagtcaaaatattttgaag ttttcattCTTGTACAAGAAAAAATGGAGAAAAGGCTGGTTGTATACGAT GTGAATCAACATGGATCGTTTTTAAAAACTGTAGATAAAGGAGTCACAAT CACGCATGTTTCAGGAGCAACCAatggtgatttttttttcactgatcAAT CTAATATTGTTTACATGTCACCACCTTTTGAACATTATGAAATCCCGATA CAGATCAGCACAATCAAAGAAGCCATGACTGAGGTACATATGTTTTCTCG CCTTCATCTGGAAGTCTTGATCACAAGTACAAACATACCTGGAATCAGCA AGGAAATGCTTCCTTATCAACAGTTATTGGTTACTGACAACAGCTTACCA CATCCAAAACCACTTACGGTATATTCAGACATGGTTGGAAAGTTTGAAGT TAACAACTCATACCGACTAACTCACATTACAGTGAGCAAATTCAATAGGA ATCGCATTTTGAAGGGTTCAGATCGCTCGGAACAAAGTGAACTGTTAGAA GGTGCTATCAAGTTACTAGCTGTACCCACCACAATGAAAGTTGGACGTAT ATCCAGTGTGGAACTGTCATCGTTAAAAGACATTAATCTCTGCAAACACT GTAAAAATCCAGTGATATACATTCGTTCAATTGTTACTTGTGAAACTTGC GACCAAGGAATGGCGCAATCAGAT

Coding sequence (CDS) from alignment at sc0000017_pilon:1846425..1847698+

>XLOC_034065 ID=XLOC_034065|Name=XLOC_034065|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1626bp|location=Sequence derived from alignment at sc0000017_pilon:1846425..1847698+ (Clytia hemisphaerica_ch_hm2_pilon)
CCCTTTCAATCGAAATATCAACTGTCAACCTATAAAATGGCTGACTTTAA
CACTCCTAGAAAACGCAAACATAAAGCCCTTTCAATCGAAATATCAACTG
TCAACCTATAAAATGGCTGACTTTAACACTCCTAGAAAACGCAAACATAA
AGATCTCACCGACTTGGTTGGCTTTGTATCGTATGTGAGTCCtccaaagt
caaaatattttgaagttttcattCTTGTACAAGAAAAAATGGAGAAAAGG
CTGGTTGTATACGATGTGAATCAACATGGATCGTTTTTAAAAACTGTAGA
TAAAGGAGTCACAATCACGCATGTTTCAGGAGCAACCAatggtgattttt
ttttcactgatcAATCTAATATTGTTTACATGTCACCACCTTTTGAACAT
TATGAAATCCCGATACAGATCAGCACAATCAAAGAAGCCATGACTGAGGT
ACATATGTTTTCTCGCCTTCATCTGGAAGTCTTGATCACAAGTACAAACA
TACCTGGAATCAGCAAGGAAATGCTTCCTTATCAACAGTTATTGGTTACT
GACAACAGCTTACCACATCCAAAACCACTTACGGTATATTCAGACATGGT
TGGAAAGTTTGAAGTTAACAACTCATACCGACTAACTCACATTACAGTGA
GCAAATTCAATAGGAATCGCATTTTGAAGGGTTCAGATCGCTCGGAACAA
AGTGAACTGTTAGAAGGTGCTATCAAGTTACTAGCTGTACCCACCACAAT
GAAAGTTGGACGTATATCCAGTGTGGAACTGTCATCGTTAAAAGACATTA
ATCTCTGCAAACACTGTAAAAATCCAGTGATATACATTCGTTCAATTGTT
ACTTGTGAAACTTGCGACCAAGGAATGGCGCAATCAGATATCTCACCGAC
TTGGTTGGCTTTGTATCGTATGTGAGTCCtccaaagtcaaaatattttga
agttttcattCTTGTACAAGAAAAAATGGAGAAAAGGCTGGTTGTATACG
ATGTGAATCAACATGGATCGTTTTTAAAAACTGTAGATAAAGGAGTCACA
ATCACGCATGTTTCAGGAGCAACCAatggtgatttttttttcactgatcA
ATCTAATATTGTTTACATGTCACCACCTTTTGAACATTATGAAATCCCGA
TACAGATCAGCACAATCAAAGAAGCCATGACTGAGGTACATATGTTTTCT
CGCCTTCATCTGGAAGTCTTGATCACAAGTACAAACATACCTGGAATCAG
CAAGGAAATGCTTCCTTATCAACAGTTATTGGTTACTGACAACAGCTTAC
CACATCCAAAACCACTTACGGTATATTCAGACATGGTTGGAAAGTTTGAA
GTTAACAACTCATACCGACTAACTCACATTACAGTGAGCAAATTCAATAG
GAATCGCATTTTGAAGGGTTCAGATCGCTCGGAACAAAGTGAACTGTTAG
AAGGTGCTATCAAGTTACTAGCTGTACCCACCACAATGAAAGTTGGACGT
ATATCCAGTGTGGAACTGTCATCGTTAAAAGACATTAATCTCTGCAAACA
CTGTAAAAATCCAGTGATATACATTCGTTCAATTGTTACTTGTGAAACTT
GCGACCAAGGAATGGCGCAATCAGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_034065XLOC_034065-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000017_pilongenomesc0000017_pilon:1846425..1847698 +
Properties
Property NameValue
Aaloc79-813:540
Aaloc1-75:1