|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:1303473..1305711+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034010 ID=XLOC_034010|Name=XLOC_034010|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2239bp|location=Sequence derived from alignment at sc0000058_pilon:1303473..1305711+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGTCAAACCAACCAATCTCAAAACTATCATATAATTACGTAAGTTGA
CATAAAGTATTTTGAGGGGGTGCAGGAGGTATGTTTGGCAGTATGTTGGA
TTGCACTATACAATGGGTGTTAGGATGATTTTGGAGATTTGGAGAGTTCT
GCCTATTTAATTCTGATTATCTTGGGGATTTTAAGTTTTACAAAAGTTCG
ACTTTCAAGTATTCTAATGATTTTAGGCAATTTTAATACTAAAAcctttc
atttcatcatttcaGAACTGGTCAAAGCAACCAACCAAATTATCATACTC
TTACGTAAGTTAACATCCTTTACTGTATATATTGGGTTTGAAGAATTTAG
AGAGCTCTGGTGATATTATCTCTGATTATTTTGGagatttttccttttta
caAAAGCTTTAAAACTTCAGGTATTCTACAGTTTTTATGCAATCTTTAAA
CTGAAACCCTCCTTCATTTCAGAACTGGTCAATCAAATCTATCACTTTGG
AACGACCAAACCAATACGTAAGTTGATATGATCTCCCTAAAACATATTTT
CTAAGTTAAAAAATTGATGGCATAATTGGGGATCTTGGGCtattatatat
ttaaaaaagaattgttgTTTAGTGTATATGTAATAGAAAAATTTTAGTCG
TAAATTATACAAACACCAACGCATAAAGTATTCAACTCCTTTCCGTCTAG
ATTTGATTTGCCCCAGACGAATCATGGAAATTCATCAAATGGGTATGTAT
TATTGCCTTTGCTCTCCTCCAAGCTATAAATGATTAAGTTTTATAGTAAA
GAATAAGAAACGTTATAATGTAATTAAATGTTAGAATTAATGACTTATTT
TCTGTCGTTTATATTGAACTTTTTACTGTAGACTGTAGTTTGTAGCAAAA
CACATTAAATGTAACAAAAGAAAGGGATCAGCATCACATATTCAAGGAAT
ATTTTCACTGTTTCTAGGTATCAAAATCGGAATTTCATGACGCCAACGTC
GGGGACTGCAGCTTCTGCATCGAAAACCCAAATGAGGTATGATAGCTGTA
TAATTAAGAATCGATTTGTCGACCACTAATTGTTTTAGATAAGTTTTAGA
TAAGGCCTCAATATGTGGTGTGTGAAAGACCATGAATATTGCCATGAGGA
GAGCCATTCCCGGGAGTCagctgtatatatttttaacacTTAATACATTT
TGTTTAAATGTCCTCTCTTTCAGATTCAGCGCCTCTCCAAATGGGTCGAT
TCTATCGCCAGTATAGTAAGTTCTAATCTAGTTTCAAGTTTTGAGTCTTA
TGAGAATGGGTCACAATGGAACCGAAATAGACTTTGCTTCCTAACTTCCA
ATCTTGATCTTTTCCAACCTTGCAAGAAACATCATTTTGCAGACTGGCCT
TAATCTAAGTATATATCACTAAAACATGGTTAGAAATGATTTAACCCGAG
CTTTGGTATAATTGTAAACCTtgtatatttggaaaatttcttgtTAAAAA
GAATTTAGATCCCTTCATATTGTAACATAACGatgattgtaaattttttt
ttcagtggtgACTTTCTAAATAGCCTCCTTGGCACTGATCAACGAAATGA
TTCAAGCATAATCGAAAACAATAGGTAAGAGCAAGCCCTGTTTTTCTACT
AACTTAATTTTATTTGTAGTATACAGTCTTTGAGGCGAAATATAAGGGCC
GTATTGGGTCAATAAAATCTGTATTTGGCGAGGTTTTGCCGAGAATTTGC
AGGCACGACACTAATTATTAccattttctttcaattcagtCAATCATCTA
GTCAAGAGCATCTTGTTGGACAGCAATTTGACCCACAAGCTCAACTTTAC
CAACAAAATAAGCGGTAAGACATTTGGGAAGTCTGTgttcaaaatcaaat
gaaagagCTCCAGCTCCAGCTCATGCCTTATTGAGCTaaaaaaaGTCATA
ATCAACAATTTTATTTACGTTCCGATTGATACAGGTTTGGGAAAATGCCT
TGAAAGTAATATTgctttttaataataatttcaGGATTGCATTGAATATT
TCGTAATTATTTGGAATTTCTTTTCCTCTTCAATTTGGccttcaaaataa
ttaaaatgaatgacttttttaaaattttagattgGTTGATAGAGTCACAG
ACTTGGAAGGGAAAGTGGCCACATTGATTGGTGTTGTCAACAAAATGTCC
AAAATGATGACACAACGAGAATCCGCCGCAACCAACCGG Coding sequence (CDS) from alignment at sc0000058_pilon:1303473..1305711+ >XLOC_034010 ID=XLOC_034010|Name=XLOC_034010|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1062bp|location=Sequence derived from alignment at sc0000058_pilon:1303473..1305711+ (Clytia hemisphaerica_ch_hm2_pilon)
ACTGGTCAAACCAACCAATCTCAAAACTATCATATAATTACACTGGTCAA
ACCAACCAATCTCAAAACTATCATATAATTACAACTGGTCAAAGCAACCA
ACCAAATTATCATACTCTTACAACTGGTCAAAGCAACCAACCAAATTATC
ATACTCTTACAACTGGTCAATCAAATCTATCACTTTGGAACGACCAAACC
AATACAACTGGTCAATCAAATCTATCACTTTGGAACGACCAAACCAATAC
ATTTGATTTGCCCCAGACGAATCATGGAAATTCATCAAATGGATTTGATT
TGCCCCAGACGAATCATGGAAATTCATCAAATGGGTATCAAAATCGGAAT
TTCATGACGCCAACGTCGGGGACTGCAGCTTCTGCATCGAAAACCCAAAT
GAGGTATCAAAATCGGAATTTCATGACGCCAACGTCGGGGACTGCAGCTT
CTGCATCGAAAACCCAAATGAGATTCAGCGCCTCTCCAAATGGGTCGATT
CTATCGCCAGTATAATTCAGCGCCTCTCCAAATGGGTCGATTCTATCGCC
AGTATAtggtgACTTTCTAAATAGCCTCCTTGGCACTGATCAACGAAATG
ATTCAAGCATAATCGAAAACAATAGtggtgACTTTCTAAATAGCCTCCTT
GGCACTGATCAACGAAATGATTCAAGCATAATCGAAAACAATAGtCAATC
ATCTAGTCAAGAGCATCTTGTTGGACAGCAATTTGACCCACAAGCTCAAC
TTTACCAACAAAATAAGCGtCAATCATCTAGTCAAGAGCATCTTGTTGGA
CAGCAATTTGACCCACAAGCTCAACTTTACCAACAAAATAAGCGattgGT
TGATAGAGTCACAGACTTGGAAGGGAAAGTGGCCACATTGATTGGTGTTG
TCAACAAAATGTCCAAAATGATGACACAACGAGAATCCGCCGCAACCAAC
CGGattgGTTGATAGAGTCACAGACTTGGAAGGGAAAGTGGCCACATTGA
TTGGTGTTGTCAACAAAATGTCCAAAATGATGACACAACGAGAATCCGCC
GCAACCAACCGG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000058_pilon | genome | sc0000058_pilon:1303473..1305711 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 424-531:2132 |
| Aaloc | 349-420:1791 |
| Aaloc | 280-345:1557 |
| Aaloc | 238-276:1225 |
| Aaloc | 169-234:969 |
| Aaloc | 127-165:702 |
| Aaloc | 82-123:474 |
| Aaloc | 43-78:267 |
| Aaloc | 1-39:1 |
|
