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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000010_pilon:2543697..2548198+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033832 ID=XLOC_033832|Name=XLOC_033832|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4502bp|location=Sequence derived from alignment at sc0000010_pilon:2543697..2548198+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAATTAAgacaaatcatttttcaaaaggttggatagttttatat
ctttttcctattcaaatttttactcaAAATATTACCAAATTTTTCATGTT
TACTTCGAGTTTTGAaaccacccctgtctcacagtcccggtggaaTGAGT
GGAACTCTCTACCGCAGTGGATGaacatttctatcgaaatcctttcccag
ctgacacacaacgttattggcccagcgctaagcgtaggcctttcatttgc
aattttctgtctgtccgtccgtgtGTCACTTTAGgcagaaacggcgctta
aaaccagtaccacacattttaattttgccgtctagagagggaaaagcttg
ctaaagtcggatactggctataaaagatatattttctgattccgcgctcc
tccaaaacaattttcaaaacaaaacaagatggcggtcgaagcgaggaggt
taattcatactttcttgaacattttctttgctttagtggtcaagagactt
tcaaaccaaagaaattttgtaattgtttttctttataaacctttttcaac
attctgccatatcttatagtctttgctcaagttttatgagtaaaaattct
accttaaatcactttcatttttaattttttcttgttttcaaaaagacttt
ataaatttttaggaaataatggcttttctgatatagaaataaataaactg
aaatgcagctgatgtgtaaaattgaataagattggaacttttttcttgat
gctacataagaaaacagtcacttctggatctgtcgctgttcaGGCTGTTA
GTGTTAACAAAACCACGGTGGTCAGTGAcagtggtgggacgtggtatgat
tttcaaactcgacagagaatttttccaagtaaacttatgttgtaactcat
taaaggatactaaaatgcagctcatgtgtaaatttgaataagtttggaat
gtttttcatgatgctacccgtgaaaatggtcaattttggatttatcgTTC
TAAACTAAAAACGGTCGGTGGTTGGATTTGTcgaacctgacagagaattt
tcccaagtaaacttatgttgtaactcattaaaggatactaaaatacagct
catgtgtaaatttgaataagtttggaatatttttcatgatgctacccgtg
aaaatggtcaattttggatcTCTATCGCTCTAAACGatcggtggctggat
ttttcaaacctgacagagaattttttcaagtaaatttatgctgtaactca
ttagaggatactaaaatgcagctcatgtgtaaatttgaataagtttggaa
tgtttttcatgatgctacccgtgaaaatggtcaattttggatttAtcgtT
CTAAACTAAAAACGGTCGGTGGTTGGATTtgtcaaacctgacagagaatt
ttcccaagtaaacttatgttgtaactcattaaaggatactaaaatacagc
tcatgtttaaatttgaataagtttggaatatttttcatgatgctacccgt
gaaaatggttaattttggatttatcgctctaaacggtcggtgactggatt
tttcaaacctgatagagaattttcccaagtaaacttatgttgtaactCAT
TAAAGAATACTAAAacgcagctcatgtgtaaatttgaataagtttggaat
gtttttcatgatgctacgcgtTAAATCGATATTTCTGAAAACGGAACTTT
GACGgtcaacatttgacatttgaagtttgtgaatttatttaaaccgattt
tttctttcatactagtaacaaaaacataaagtaaatctattatatacata
tattgcgtatcatttatcattgctgaccttccagcgcagctggtttcttt
tctctttttttcattaagccaattttcgaactttttaaactttttgaatg
ttcCGTATTTCAATCTCAGCCGAAAATGTGCATTAGGATTCTAAGAcaca
atgttttctttcaaaccctaaaattgcaaaaatacgaTTCCGCAAACATT
GGTTCTCTTAAGGTACCCAATACAAACGACAtttggttattgccacgtca
gctgggccttcacgccgctACGGCTtcttgtttcaacgttaatctaacgt
tcaaaacgtccatataacgttaaattaACAttaaattaacaagcgggggg
agGGGTTCATGAGTCATGACCTCAagagattttcattttgtattccAGTA
TAGTTTATCATATCGCTGGTTCGAATTACGACACCCACGCTACAAAAGAC
TGCACTTGAACGAAGAACATACGTCCGTCCTTTTAGAACAATTATTCTTG
TCAGGTTATTATGTTCGAGATCAATTTAAAGAAGATGCGATTCTTGAGCT
TTCGTTAGAAGACAAGGAGAAAATGGATATGTATAGTTTGTTTCACTATC
GATTGtttggtttgaaaaaaattgttctgaaaTCGCTAACTAAAGTGATG
GAGCTAGATGTTAaggtgagtgtttttttttaaacgggTTGAATACATAG
CTGTCGATTCCTTCCTCCAAATTTCCACATTATTTTCGCATTTCCGAGAG
GTGTGATGAAAGAATCagggttttttaaaaaaatttgggacgaaaatttg
taacgaaaaatttcactatttcaccaaaaaaatgtattaattaATCCGGT
TTATTACTCCCGTaacatttatcaaattttttttcttccactTCCCTGCA
ACATACCCAGCaagcacaaaacgttgttttaacgtccaaataacgttatt
tggacgttatgaatgtcaaatggacgttgatACGACGTCGAGTGCCGACT
GGGTATGCTAATGAAACAATCCATAGTAAAAAGGTaaccagttggcacac
aacgttgtttcaacgttcatctaatgttcacaacgtccatataacgttag
atgaacgttgaagcaacgttgtTTGCCATCTGGGAAAGCATGCGGTGCGA
AATGTTATGGGTTCAATCCCCGCTCAGGTCCAAAagtacaaaaatggtac
ttgatgtctctctaCTTGACGCTCATTAATTAAAGAGAAGAATCGAGGGT
AAGtgaagcaatccagggagaaagggTGGCagcctcccctacctttgggt
agacagctatcgaacGAGGAGCCGttccagcggccgaagaccttgACAAA
CAGCCGAAGACATGCTTAGACTGTTGAGAATCTAAATGTAGCATAGCAGA
TCTTcagtttttaaaaatcaaattattcaaaCTGTATTGGTTATCATACT
GTTgaagttaaatatttttttgagttgaaaaaagCGCGACTGTTTTCGCA
GCGTCCTACTCAGAGTCTGATTCTTAAGACTTTATTAcgtttcccagctg
gcacacaacgttgtttcaacgtttttctaacattcacaacgtccatataa
cgttagataaacgttgaaacaacgttgtgggcCAGCTGGGTTAACTATTC
GTTTTCTAAACTAGGTTTGCCAATCATTTCCACGATTAAAGAAATCCATT
GAGGAAGAATGGCTCATACCGGCACACCTTCAATTATATTTACACCATGG
AAAAGAGATTCTGGAAGAGAAATCTTTCCTGGATGTCTTTATAGAGGGCG
CTACAGAGGCGGAACAAGATGACGGCAAGTTGGAACTCAATTTGATATCA
AAAACTCCTCAAAATTTGACTGTAATACTGGTGCTACCAGAATATATGCA
AGACGTAGGTCAGTAGgaatcattttcAataaaaagcttgatcttaggca
aaaataaagaaagtagCGTTTCCGGAAcgtgtgaaaaattttttctcacc
CGCCGCAGACTTTCGTTTCATtcgttgatacattagtattcagggtttac
ttcatactgttatacatAaaaGttatctttaaagttatcaaaaatagcaa
caaaaacactttctttctatttttcgCCTTATTAAAAGGGAACAGAAACT
TCTGACTTCGGGTAAAAGATTTAGTTGCGGATAAAGAATTCAAGAAAAAG
CTTTGTCAGATGATAAAATGTCGGAGAATTTttgcaattgaaaaaaaatt
gtcgaattccACTTGGAAGCAGATCCTTTTAGCTCTATAGAaacagtttt
ttcttaaatttatcaacaaattttttccaaatatttccTACAATTGTCAA
ATCGAATTTAGGTCGAAATCTATTTTTCCAAATTAATTAgtgaatttcaa
tttaatgttAAAAAGCTTTTTCGGCCATCCAATAATTTGTATCCCCCGCC
CGCCAAAATGTATTCTTAAAAGCtttttttCGTATGCGTAACAATATATA
ATTTTCTCTTTCGCCTTTTCCAGGGATACCTACGGAAATCTCTATGCCCG
AAACTTCATCGATCAAGGACGTTGAAAAAACATTAACAGAAGAAATCTCT
TTACCAATATCCTTATACACTTCATCCCAACCATACAATGAACTTTTATA
CAAACGAGAGAGAACATTATTATACCAGCTTAAACCGTTAAATGAGGACG
CT Coding sequence (CDS) from alignment at sc0000010_pilon:2543697..2548198+ >XLOC_033832 ID=XLOC_033832|Name=XLOC_033832|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1446bp|location=Sequence derived from alignment at sc0000010_pilon:2543697..2548198+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAAGAATTAAgacaaatcatttttcaaaagATGGAAGAATTAAgaca
aatcatttttcaaaagTATAGTTTATCATATCGCTGGTTCGAATTACGAC
ACCCACGCTACAAAAGACTGCACTTGAACGAAGAACATACGTCCGTCCTT
TTAGAACAATTATTCTTGTCAGGTTATTATGTTCGAGATCAATTTAAAGA
AGATGCGATTCTTGAGCTTTCGTTAGAAGACAAGGAGAAAATGGATATGT
ATAGTTTGTTTCACTATCGATTGtttggtttgaaaaaaattgttctgaaa
TCGCTAACTAAAGTGATGGAGCTAGATGTTAagTATAGTTTATCATATCG
CTGGTTCGAATTACGACACCCACGCTACAAAAGACTGCACTTGAACGAAG
AACATACGTCCGTCCTTTTAGAACAATTATTCTTGTCAGGTTATTATGTT
CGAGATCAATTTAAAGAAGATGCGATTCTTGAGCTTTCGTTAGAAGACAA
GGAGAAAATGGATATGTATAGTTTGTTTCACTATCGATTGtttggtttga
aaaaaattgttctgaaaTCGCTAACTAAAGTGATGGAGCTAGATGTTAag
GTTTGCCAATCATTTCCACGATTAAAGAAATCCATTGAGGAAGAATGGCT
CATACCGGCACACCTTCAATTATATTTACACCATGGAAAAGAGATTCTGG
AAGAGAAATCTTTCCTGGATGTCTTTATAGAGGGCGCTACAGAGGCGGAA
CAAGATGACGGCAAGTTGGAACTCAATTTGATATCAAAAACTCCTCAAAA
TTTGACTGTAATACTGGTGCTACCAGAATATATGCAAGACGTAGGTTTGC
CAATCATTTCCACGATTAAAGAAATCCATTGAGGAAGAATGGCTCATACC
GGCACACCTTCAATTATATTTACACCATGGAAAAGAGATTCTGGAAGAGA
AATCTTTCCTGGATGTCTTTATAGAGGGCGCTACAGAGGCGGAACAAGAT
GACGGCAAGTTGGAACTCAATTTGATATCAAAAACTCCTCAAAATTTGAC
TGTAATACTGGTGCTACCAGAATATATGCAAGACGTAGGGATACCTACGG
AAATCTCTATGCCCGAAACTTCATCGATCAAGGACGTTGAAAAAACATTA
ACAGAAGAAATCTCTTTACCAATATCCTTATACACTTCATCCCAACCATA
CAATGAACTTTTATACAAACGAGAGAGAACATTATTATACCAGCTTAAAC
CGTTAAATGAGGACGCTGGATACCTACGGAAATCTCTATGCCCGAAACTT
CATCGATCAAGGACGTTGAAAAAACATTAACAGAAGAAATCTCTTTACCA
ATATCCTTATACACTTCATCCCAACCATACAATGAACTTTTATACAAACG
AGAGAGAACATTATTATACCAGCTTAAACCGTTAAATGAGGACGCT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000010_pilon | genome | sc0000010_pilon:2543697..2548198 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 547-723:4326 |
| Aaloc | 301-543:3465 |
| Aaloc | 34-300:2199 |
| Aaloc | 1-33:1 |
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