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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000036_pilon:1112085..1117253- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033826 ID=XLOC_033826|Name=XLOC_033826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5169bp|location=Sequence derived from alignment at sc0000036_pilon:1112085..1117253- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGGTAGTTCATGCTGCAATAAATATTTTTGGTTTGAAGTTCTCAT
TCTGCTTGTCTCGTTATATTTTCTGATAAATTATATTGTTGACCATTGGA
TTTCAACAAAAGTTAAACAAAATGTTCTGGTGACAGGCTGCGATTCAGGT
TTTGGTTTGCAAACAGCTTTAGTATTAAGTGAATCTAATTGTAAAGTTTT
TGCTGGTTGCTTAACCCAAGATGGTGTTAAACAACTTGAGAATGACGCAA
GGTTTCAAGGGATGGCTTTTATCATGGATGTGACCAAAGATGAAGATGTT
CAAAATACAAAGAAGATTATCGAAGAAAATGGTGGTAGGCTTTGTTGGGT
GTTTCTACCTACTTATAATTCGGCATTTAAGAGATTTCCATGCCCCATGA
GTCATGGCTTAAAAAGGATGAAGCCTGAGAAATCCGAGTTAAAAACCCGA
GTTATGAGAACCCGAGTTGTGAAAACCTGAGTTAGGATGCACCTTAATTT
TTCGAGTTAATTTTAAATATTTGAGTTTTATTATAACTCCTTCGTTTAAG
GCATACCTTCGAACTTTCATTGAATCCAGCGAGTTCCGATCCATTGTGTG
AGTTAGGGAGACTCACTTGTGTTTCTTTTAACTTTTTAGGAATTGATGGT
CTGGTAAACAACGCTGGAATTCTTATCCATGGTTTAATCGAATGGCAATC
TATCGAATTAATGAAGAAAACGTTCGAAGTGAATTACTGGGGGCTTGTTC
GTGTTACCAAAGTCATGCTACCATTATTGAAAAAGTCACGTGGTCGTATC
GTCAATCTGACTAGTATAGGAGGTACAATATGAGAGTTCATAATTTTTTC
ATTAGAACAGCTTTATGACAACAATGAGGCTCAATCATCTCAAAAAATCA
GAACAATATGTAAAGAACAAAGAAAGAATTGCTGAAACTTACATAGATAA
AGGATCAAATAAACCAGCTGCGCTGGAAGCTCCGGCTTAAGAGATTAAAA
GATGTGAAAGATGAGCTTGTTGAGTTAGTTGTTTTAGAATGTTGCCCACA
AACTACTAATCAGAACAGATCAGAAATCAAAGTAATAATTCTATTGCAGA
GCGAGTATGAGAAATAATCTTAACAAATAAATAAACCAGCTGGAAGTTTA
GCTCTTCTAAGTGATTACACATGCACTTTCTTGCCTAAAGAACCAACCCC
ACCCCCGCATACTCATCCTCGACTAAAAAGTTCAAAATTGGAGCTAAAGG
ATATAAACATTTAGAAGTGAATATTTCCAAGCTCTTATACTGCAAATTTA
TTTTTTTCTAAACTTGCCAATAGCGAAGCCATGATGCGCCGTTGATTTGA
TTGTCCGGATAAAATTTTGGGGAGAAAAATAGCCTAAATTAGAGGCCACG
GCTTTGAGCTAAGCATTATTTTTTCTGTTGGGATAATACTTGGAAAAGAG
TAGGATAAACCAAATAAAATGGTACAATAGTGTGTATGTAATAAATAGTG
GTATATTTGGAAAAAACCTGTTTCGGGTTTGAAAAATATTCAAAAGGAAT
GGTCGCCCCAGCCAATGAAATTATGACAAAGTCCAAAAAATATAATTTTC
AGTTATAACACTGTGAAAATTTCTCTGATCTTGTTCAAATTTACACAGGA
ATTGTGTTTTAGTATCCTTTACTGAATTCTCGTAGCGATATGTTTGTAAA
AAATCTGTGCCGGGTTTGAAAAATCAAAAGGAACGGTCGCCAGCCGCGAT
ATGAAATTACGACAAAGTCCAAAAACGATTATTTTCAGCCATAACACTGT
GAAAATTTCTCAAATTTTCACAGGAATTGTGTTTTAGTATCCTTTACTGA
ATTCTCATAGTGATATGTTTGTAAAAAATCTGTGTCGGGTTTGAAAAATC
AAAAGGAACGGTCGCAAGCTGCGATGAAATTACGACAAAGTCCAAAAACG
GTCATTTTCAGCCATAAAACTGTGAAAATTTCTCCATTCTTGTTCAAATT
TACACAGGAATTGTGTCTTAGTATCCTTTATTGAATTCTCATAGTGATAT
GTTTCTAAAAAGTATGTGTCGGGTTTGAAGAATCAAAAGGAACGGTCGCC
AGTCAACAATGATGAATACAAAACAAGATCATTTTCAGCCATAAACATAA
CACCACAAAAACTACTCAGATCGTTTTCAAATTTTCACTGTAATGTTGTA
ATTTTAGTATTCTCTTTTAAATTCCAATGGATGTGTGTTTGAAAGTTTCA
TTGTCAAGTTACCAACAGAATTTTATGGTTTTATTAGCCATATGCAAGAT
TTAAGCACTCGATTCGATCAGCTGACGATTTATGGCCAAAATTTCTCCAA
AGTCTTTCCACATTGTTAGAGAGCCAGTATGCATCAAACTTCTCATAAAT
CATGTCCAAAACATCATGAATAATGATGAAAATGATCAATTTTTCACTGA
GATTTGCCATCTTTTTCTTTAAAATAAAATACTTTCGGCCAGAATCAAAT
CACAGTATTATTGGAATCAGATAATCCGTTTTTATTAAATCGGAATAGAT
CATCGGATTAGATAAACAAACAAAAAATGTCTTGACCGTCGTCGTCGTCG
GACGAGAGAGAATTTAAGGCTCCTAGGCCGGAGCAAAAAGTAGAACCTGA
GTATAAAGCCTTGATTTTGTCCAAAAAATTGGAGATAGAAACAATTGTGG
CTGGAAAAACCATCAAATTAAAAACAGGCAAGCCACAACAATAAAACTAC
TGGTTTTTATAAGAAAAGCGTATACTAAGTAAGAAAGGACTTGACAAACT
GAACCAAGTAACTAGTTCTCCAAATTATAGACTGCAATCTCACAAATTAA
GTTGAGAAATGTTGCTTGCTGAAAGAATCTAAATCCCCGTTAAAAACTCA
GAATAATACTCCCAGTACTCCCAGCTGACACACAACGTTATTTCAACGTT
TATCTAACGTTCACAACGTCCATATAACGTTAGATGAACGTTGAAACAAC
GTTGTGTGTCAGCTGGGCTCACGTTTATCATTTGGTTTTTAGGTAGACTC
ACGCCACCGTATACAGCTCCTTACTATTGTTCCAAATATGCAGCCGAAGC
ATTTTCTGATAGCTTACGTCTTGAAGTTAAACCTTGGGGTATAAGTGTTC
ACATTATTGAACCATCCTATTATAAAACTGCAATCACAAATGAAGAGACT
GTTCGACGTAATTGGCAGAAACTTTGGAATGAACAACCTGATGAAATCCA
AAATGAAATTGATGAGAAAACTTTCCACGAATGTAAGTTAGAGTCGACTC
TCTTTAATTCGATATTAAAAGGAATCCAAATTAGAGAAAGATTCGAATTA
CAGAAATTATTTTATATCATTCTCCAGTTGAAGGGACCGATGTTTTAGTT
CGAATTAGAAAAAGATTCGAATTACAGAAGCACGAATGTTTATCCGTAAC
CTATTACATGTTTTTTTTTTATAAGCAAGTGTATGCCCCTTGGTCAGGCT
CGAGTATGTTTAAGCTTTCAAAGCATCCAGACATAGAATATGCTTATTGT
ATGCTTAAGAATTATTATGCTTTTGATTCACCCAACCAAATTTTTTAGTA
AAATCTTTAAAATTTTGTTAATATTCGATTCAAAAAGCATTTAAATTTTT
GAGCAGTGGAATGTGGCTAGCCGTGGAATGTATTTTTTTACTTGACCACT
TGCAAACCTTTTTGAATAGAAAGAGATTGGCTACTTGAAAAATATCCCAG
GCTAGTGTATATGCTTATGTTATGCTTCATGCTTAGGAAATCTGCAAATC
TGAGCCTTCATATGCTTATAAGCGTTATGCTTATAAAAAAAAAACATGTA
TACTTTATCGGGATCATGTTCAGTTTACGGTGCTCATGGTCAGCAAATTG
TGGACCAGTGGGTTTCACTAGTCCAGTTGTAATCAATATCTGTAATTTTC
TCGTGTTCATTTCTTTAAAGATTTTGATATATGAAATATTTATCACAAGT
CACAAGTTTCTATTCGATCCATAAAATTCTCATAAAAAAACAAAGTATTA
ATTTACAGTTTTTTGAAAAAATACTATCTACATTGAAGGCGTATCGAGAT
ACCCTGCAAAATTTATGGACGAGAGCTGTTTTTACGACACTGTAATATAT
TTGTCTTTGTTTTTTCAAAAGATAATGAATCTGTCTTAAACGTCTGCACT
CCCTCGTAAATTTTTCAGGGTATCTCGCTTCGTCTATGAATTAAACAAGG
CTAAAAGAGTTTCGACTTTCTAACAAACGTCTGGATAATAGCATATATGC
AGATGGTCTTTGCGGAAAGACTAACTGGAACAAAACGCCATTAAAGCTCC
ATACAATAGACGTATTCAAACAATTTCTATAGTGATCATATCCCTTGAGA
CATTAAATGAATTTTGTATGAATAGAAAGTACTAGTAGTTGTAATAAAAT
CTACTGGGAGTTAATCACCATAGCAATAATTTCAAAACGAGGCAAGTGAT
GTTCGTGACGTAATTCATGAAAAGGTCTATGGTACTTAAAAGCTTTTTGA
AGGATATTTTAACCATTGAGTTTCAAGCCCGAAGAGCTAGAGGCGAAACT
CCTGGATGGGAAATGAAACCACTTATTTCCCATCCAGAACGCCCACGCGT
AGTTTTTACACAAACGCTGGATTGAAACTAAAACCTATCACTAGATTTCC
TCCAAAACAAAGGAACCGCTAGATACAATCCGTCGTCACGATTACGGCGC
ATTCTATGCGCGTTTTGGACGGGAGATTAAGTGGCTTCAATTTCGCTTGC
CTGAGAAGGGTTAAAGCTTCGCCTCTAGCCCTTCGGACTTGAAACTCAAT
GATTTTAACATCCAGGCTGGTAAATTAATCCCATAGAAATAACACTACCT
ATTATAAATGTTCTTTGTTTTCTTTTCTTTTGACAGTTGTTACTGCATTT
TACAAGCAAATAAGTATCGGTTCAGAAAACATCATTGAAGTTGCATTGGT
GATTAAGCATGCATTACTGGCAAAGTTTCCGAGGCGTCGATACATCACTG
GTGTTAATTGTGGACTAGCAGCTTTCGCAACCCATTTACCGACTGTACTT
GGAGACTTCTTTATGGCATTGAGCGTACCTCTTTTACGTCCCATCAAAAC
ACCAAAGAAAACAAACTGA Coding sequence (CDS) from alignment at sc0000036_pilon:1112085..1117253- >XLOC_033826 ID=XLOC_033826|Name=XLOC_033826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1980bp|location=Sequence derived from alignment at sc0000036_pilon:1112085..1117253- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGGTAGTTCATGCTGCAATAAATATTTTTGGTTTGAAGTTCTCAT
TCTGCTTGTCTCGTTATATTTTCTGATAAATTATATTGTTGACCATTGGA
TTTCAACAAAAGTTAAACAAAATGTTCTGGTGACAGGCTGCGATTCAGGT
TTTGGTTTGCAAACAGCTTTAGTATTAAGTGAATCTAATTGTAAAGTTTT
TGCTGGTTGCTTAACCCAAGATGGTGTTAAACAACTTGAGAATGACGCAA
GGTTTCAAGGGATGGCTTTTATCATGGATGTGACCAAAGATGAAGATGTT
CAAAATACAAAGAAGATTATCGAAGAAAATGGTGATGGAGGGTAGTTCAT
GCTGCAATAAATATTTTTGGTTTGAAGTTCTCATTCTGCTTGTCTCGTTA
TATTTTCTGATAAATTATATTGTTGACCATTGGATTTCAACAAAAGTTAA
ACAAAATGTTCTGGTGACAGGCTGCGATTCAGGTTTTGGTTTGCAAACAG
CTTTAGTATTAAGTGAATCTAATTGTAAAGTTTTTGCTGGTTGCTTAACC
CAAGATGGTGTTAAACAACTTGAGAATGACGCAAGGTTTCAAGGGATGGC
TTTTATCATGGATGTGACCAAAGATGAAGATGTTCAAAATACAAAGAAGA
TTATCGAAGAAAATGGTGGAATTGATGGTCTGGTAAACAACGCTGGAATT
CTTATCCATGGTTTAATCGAATGGCAATCTATCGAATTAATGAAGAAAAC
GTTCGAAGTGAATTACTGGGGGCTTGTTCGTGTTACCAAAGTCATGCTAC
CATTATTGAAAAAGTCACGTGGTCGTATCGTCAATCTGACTAGTATAGGA
GGAATTGATGGTCTGGTAAACAACGCTGGAATTCTTATCCATGGTTTAAT
CGAATGGCAATCTATCGAATTAATGAAGAAAACGTTCGAAGTGAATTACT
GGGGGCTTGTTCGTGTTACCAAAGTCATGCTACCATTATTGAAAAAGTCA
CGTGGTCGTATCGTCAATCTGACTAGTATAGGAGGTAGACTCACGCCACC
GTATACAGCTCCTTACTATTGTTCCAAATATGCAGCCGAAGCATTTTCTG
ATAGCTTACGTCTTGAAGTTAAACCTTGGGGTATAAGTGTTCACATTATT
GAACCATCCTATTATAAAACTGCAATCACAAATGAAGAGACTGTTCGACG
TAATTGGCAGAAACTTTGGAATGAACAACCTGATGAAATCCAAAATGAAA
TTGATGAGAAAACTTTCCACGAATGTAGACTCACGCCACCGTATACAGCT
CCTTACTATTGTTCCAAATATGCAGCCGAAGCATTTTCTGATAGCTTACG
TCTTGAAGTTAAACCTTGGGGTATAAGTGTTCACATTATTGAACCATCCT
ATTATAAAACTGCAATCACAAATGAAGAGACTGTTCGACGTAATTGGCAG
AAACTTTGGAATGAACAACCTGATGAAATCCAAAATGAAATTGATGAGAA
AACTTTCCACGAATTTGTTACTGCATTTTACAAGCAAATAAGTATCGGTT
CAGAAAACATCATTGAAGTTGCATTGGTGATTAAGCATGCATTACTGGCA
AAGTTTCCGAGGCGTCGATACATCACTGGTGTTAATTGTGGACTAGCAGC
TTTCGCAACCCATTTACCGACTGTACTTGGAGACTTCTTTATGGCATTGA
GCGTACCTCTTTTACGTCCCATCAAAACACCAAAGAAAACAAACTGATTG
TTACTGCATTTTACAAGCAAATAAGTATCGGTTCAGAAAACATCATTGAA
GTTGCATTGGTGATTAAGCATGCATTACTGGCAAAGTTTCCGAGGCGTCG
ATACATCACTGGTGTTAATTGTGGACTAGCAGCTTTCGCAACCCATTTAC
CGACTGTACTTGGAGACTTCTTTATGGCATTGAGCGTACCTCTTTTACGT
CCCATCAAAACACCAAAGAAAACAAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000036_pilon | genome | sc0000036_pilon:1112085..1117253 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 760-990:232 |
| Aaloc | 520-756:2126 |
| Aaloc | 337-516:4529 |
| Aaloc | 1-333:5170 |
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