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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000036_pilon:1453829..1456036- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033820 ID=XLOC_033820|Name=XLOC_033820|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2208bp|location=Sequence derived from alignment at sc0000036_pilon:1453829..1456036- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAGGTTATATATCATCTGTGGATTGCTGGCAGCTTTCATTGCACT
TTCATGTGAGTCTTTAATACTACGTTGGTAAGGCTTGAGCCCTGAAATTT
GTCAATTTTTTTCACTATCTCGTAAAGTAAAAGCTTTTATATAATCTAAG
CATGGCAAAGGATAGCCCTCGACCCAATAAGCATAAATATGGTTTAATAC
CAGGGATGGTCAAAGTAAATTTTTCAGAAATTTAAAGCCCTGACCCGGAA
ATTTGAGTTACTTATTGGATTACTAAGGCTTTGCTTTTTACTCTACCTCA
TTAGAATACATAATGGACCCCCCCCCAATAATACTGTGAGGACAAAATGT
GCAAAAGCTAGAATTAAAATGTTTTATCCTAGTATTCACTTTGGTTGAAC
TTTTTCTTCCTTGAATGTATCAGATGGAGCTGACAAATGTGAAAATGAAA
GTTGGGATTTGACATGCTGGAGAAAGAAGAAGTTTACTCAGAAGGATATG
TGCTACAAAGCGGAGGGTAAACAGAAATGCGCTGAAACATGTAATCTTTG
TAACGAGAAGTGCGGTATCTCCAAAGTTTCACAAAGTCGAATTGTCAACG
GTGTCGAAGCGAAAGAAGGAGCTTGGCCATGGATCGCCTCTCTCCAACTT
CAAGGAAAACATTTCTGTGGAGCTACCATTTTGACACCAAAATGGGTGAG
TCGTCTGAATCCCTTGGAAATGCCGAAGTTGACAATAAGTGTGATCTTTC
ATTGAAATCTTCGTTCAATACAAGCTGCCCCATTAACAATCCATGTATAA
GGCTTAGCTACACAGCGAACTCTTTAATTTCTATTATTTAAGGAGTGATT
GGTCCAGCAATAGAATAGCCCCTTAAGATTTTAGAAAACTTTATATTTCA
GGTTCTAGCAGCCAGTCATTGTGTTCAACCACTGAAGAACATGCCAAATG
CTATGGACGCGTTTACCGTGACACTGGGAGCTCACGATATCACCAAATCG
GAACCTAAACAACAAACAATCAAAGTGAAACGTTTCATCATACACAAGGA
TTATGATACACGTGTGATGATGGCAGATATCGCTCTTCTGGAGCTGGAGA
CACCAGCAATGTTCAATGATCGTGTTGTGACACCCTGTCTCCCCAATGAA
GGAAGTTATCCACCAAAAGATTTGAAATGTGTGGTTGCAGGTAATGGTGC
ACCTAAAGCTTCGAGGCCGAGAATCTGAGAATATCCTTAGAACATTAAGG
CTATGCGAGCTCAAAAAGATATTGAAAAGAAAAAACTATTTAAAAAACTA
ATTTTAGGCTTAATTAAAACCCAAAAATGTTTTGAACTTTTAAATGGTTT
TATATAAAAATTAGACATCTAGGTACGTCAATCTGTTAGCTGGTGGTCTT
ATACAGGCATTTTCATAAATAAACTACTGGTTTAGTTAAGAATTTCCCTC
TAAAATGATAAACTAGTCCCGGGCCCCGTTCATTTCCTCGTTACAGACAA
CAGGTGTACACTCAGAAGTCACTGATACAGCAAACAATTTTGAGAAAAAA
AAGCTTCCAATATTTTTCTTTTACTATAGGATGGGGCATTACCAAATTCC
CAAGCTCCAATACCGCATCAAAACTTCAACAGACCATCCTCCCAGTGGTT
GGTACACCACATCAAGGTTGCCATAACAACAAAGAAGTTGTCTGTGTTGG
TAACGGATTCACCAAAACATCTGAGGGTAGGAGATATATTTAGTCTTAAC
TTTTGTCAAACATTGAAGACCGACTCAAACTTTTAAAAGTGTTTTTCAGA
TATCTTTCGTTCAATGGAACATCTGACTTGAGATCGTCCCGGGGAGATTT
TAACCCGATTGTAAAACTCACTGGGAAAAAGACTGTAACTTTGAGTATCC
TGACTTGATTTTGGAGAAGTTTTTAAATAATGGGATTTGTAATCTCACCA
ATTTCAAACAGACCATTCTCCATTTGGATTACACAAACAGGGTGTTTCTT
AGAGTGTTATTTTTCCTTTTCAGGTAAGCAACAACCAAATGCATGTCAAG
GTGACTCTGGTGGTCCATTAGTTTGTCAACTTCCAAGCGGTCAATGGAGA
TTGGAGGGTGTGGCTAGTTATGTTCACACTTATTGTAAATACTATACAGC
TTACGCTCCAGTCAATAAGTACATGCCTTGGATCAAACAATATGTACCAG
GATTGTGA Coding sequence (CDS) from alignment at sc0000036_pilon:1453829..1456036- >XLOC_033820 ID=XLOC_033820|Name=XLOC_033820|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000036_pilon:1453829..1456036- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGAAGGTTATATATCATCTGTGGATTGCTGGCAGCTTTCATTGCACT
TTCATATGGGAAGGTTATATATCATCTGTGGATTGCTGGCAGCTTTCATT
GCACTTTCATATGGAGCTGACAAATGTGAAAATGAAAGTTGGGATTTGAC
ATGCTGGAGAAAGAAGAAGTTTACTCAGAAGGATATGTGCTACAAAGCGG
AGGGTAAACAGAAATGCGCTGAAACATGTAATCTTTGTAACGAGAAGTGC
GGTATCTCCAAAGTTTCACAAAGTCGAATTGTCAACGGTGTCGAAGCGAA
AGAAGGAGCTTGGCCATGGATCGCCTCTCTCCAACTTCAAGGAAAACATT
TCTGTGGAGCTACCATTTTGACACCAAAATGGATGGAGCTGACAAATGTG
AAAATGAAAGTTGGGATTTGACATGCTGGAGAAAGAAGAAGTTTACTCAG
AAGGATATGTGCTACAAAGCGGAGGGTAAACAGAAATGCGCTGAAACATG
TAATCTTTGTAACGAGAAGTGCGGTATCTCCAAAGTTTCACAAAGTCGAA
TTGTCAACGGTGTCGAAGCGAAAGAAGGAGCTTGGCCATGGATCGCCTCT
CTCCAACTTCAAGGAAAACATTTCTGTGGAGCTACCATTTTGACACCAAA
ATGGGTTCTAGCAGCCAGTCATTGTGTTCAACCACTGAAGAACATGCCAA
ATGCTATGGACGCGTTTACCGTGACACTGGGAGCTCACGATATCACCAAA
TCGGAACCTAAACAACAAACAATCAAAGTGAAACGTTTCATCATACACAA
GGATTATGATACACGTGTGATGATGGCAGATATCGCTCTTCTGGAGCTGG
AGACACCAGCAATGTTCAATGATCGTGTTGTGACACCCTGTCTCCCCAAT
GAAGGAAGTTATCCACCAAAAGATTTGAAATGTGTGGTTGCAGGTTCTAG
CAGCCAGTCATTGTGTTCAACCACTGAAGAACATGCCAAATGCTATGGAC
GCGTTTACCGTGACACTGGGAGCTCACGATATCACCAAATCGGAACCTAA
ACAACAAACAATCAAAGTGAAACGTTTCATCATACACAAGGATTATGATA
CACGTGTGATGATGGCAGATATCGCTCTTCTGGAGCTGGAGACACCAGCA
ATGTTCAATGATCGTGTTGTGACACCCTGTCTCCCCAATGAAGGAAGTTA
TCCACCAAAAGATTTGAAATGTGTGGTTGCAGGATGGGGCATTACCAAAT
TCCCAAGCTCCAATACCGCATCAAAACTTCAACAGACCATCCTCCCAGTG
GTTGGTACACCACATCAAGGTTGCCATAACAACAAAGAAGTTGTCTGTGT
TGGTAACGGATTCACCAAAACATCTGAGGGATGGGGCATTACCAAATTCC
CAAGCTCCAATACCGCATCAAAACTTCAACAGACCATCCTCCCAGTGGTT
GGTACACCACATCAAGGTTGCCATAACAACAAAGAAGTTGTCTGTGTTGG
TAACGGATTCACCAAAACATCTGAGGGTAAGCAACAACCAAATGCATGTC
AAGGTGACTCTGGTGGTCCATTAGTTTGTCAACTTCCAAGCGGTCAATGG
AGATTGGAGGGTGTGGCTAGTTATGTTCACACTTATTGTAAATACTATAC
AGCTTACGCTCCAGTCAATAAGTACATGCCTTGGATCAAACAATATGTAC
CAGGATTGTGAGTAAGCAACAACCAAATGCATGTCAAGGTGACTCTGGTG
GTCCATTAGTTTGTCAACTTCCAAGCGGTCAATGGAGATTGGAGGGTGTG
GCTAGTTATGTTCACACTTATTGTAAATACTATACAGCTTACGCTCCAGT
CAATAAGTACATGCCTTGGATCAAACAATATGTACCAGGATTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000036_pilon | genome | sc0000036_pilon:1453829..1456036 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 766-948:184 |
| Aaloc | 619-762:628 |
| Aaloc | 328-615:1308 |
| Aaloc | 58-327:1784 |
| Aaloc | 1-54:2209 |
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