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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000087_pilon:677509..683173- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033817 ID=XLOC_033817|Name=XLOC_033817|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5665bp|location=Sequence derived from alignment at sc0000087_pilon:677509..683173- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGATGTGGAGAAAACTGCCGATTTGAATTTCAAGCGAATAATAAA
TCAAAATGAAGATTTCCAGCAGTTGAACATAGAAGTGAACAAAGGATTAT
GGATCTTTGGTTATGGCTCGTTGTTGTGGAAAGTTAACTTTGAATACGAA
AAAGACTTGTTTGGTACCATCAAAGGATTTGCGCGAAGGTTTTGGCAAGA
AAGTACTGATCATCGAGGAACTACTCAATTTGTAAGTTCTTGATTTAAAC
TTTAATCTCTAACTTTTCATGACTACGCTTTTTTATAAGCACCTCCGATT
TCGGGTTAGCCTTGGGGTTGGTTAGCATTTTAGCTCATTTTTTGTTAAAA
ATTGCTCTGACTCATACCCCTGATATTAAACCATATTCATTTTTAGTGGG
TCAGGGCTATCGTTTCTATATCCCCTATATAAATTCTGATTCATTTAAAC
GAGCTAAAATGCAAAAACAACTTCAGCCCTGAGCCCGAAATCGGGGTGTA
TTACACGCTTTTTTTATAAGAATGGTGTAAATCCATTTCATCATAGATAT
TCTTAATTTTTTTGGAAAAATATCATCCTAAAATATTCTTACAACATTCT
TAGGTCCTAATTCAAACTAGATTTAACATTTAATACATACGTCTCAAAAT
ATGGTGATATTCTTTGTACATTCTTAGTTTTTTTTACCATTTTCATCATG
GACATTCTTATAAAGTGTATTCTTATAAAAAAAAGCGTGTAGTGTATATA
CAATATCAATATCGAAGACTTCACCAGTACAACCTTAATTCCATATAAAT
GTTTTTTCCAAACCCCCCTTCTCAATTTTGCGATTAACGTTCAATTATTG
TTTCAATCTTTTTTAGCCTGGAAGGGTTGTAACACTGGTTCCAAGAGAAG
ATGTAAGAGTTCAGTATTTCACCATTTGTCCCACCATAAATTTGTAGTCC
ATTGTTTTAAGTGTGCTTTAAGAAAAACAATCTCGAGGAAATTGGTCTAA
CTACTTTAATCGTAGAAATTTTAGCGAGACTAATTTTAGCGTTTTAGCGA
GTTTTCCCTATTTTCGCTAAAATAAATCTCGCTAAAACACGCCGAATCGA
CAGATCGCTAAAATTTATCCACGCGAAATTTCTGGCTATATTGCCTTGAT
ATATTTTTATCAATAGGAAGGGTTTCAGTGCAAAGAAATGCTAGAAAACG
AATTAAATCAATAATTTAATACGAGTATTCGCTAAAATTTATCCACGCGA
AATTTTTTGAAATCGTGATTTGTTAAAATAAATCCAAAAGAAGTAAGATT
TTCCTGACTCGCTAATATACGCTAAAATTAGTCTCGCTAAAATTTCTACG
ATTAAAGTATACTGGTGTGATGTGGTTTGACGCATTGCATGAGTACACTT
AAAACAATTGGAGGGTTTGCATTGATGGGCTTAATAGAATGGGTGCATCC
AAAGAAGTTTAGGTTCTATACTCTTTATGGAGCTACAATTCACCTGGTAA
GTGAATTTATTTTCACCTGGGTCAACCCATACCATTCGACAGAGGAATAA
TTTGCCACTTTGATACAAGAGTCTTATTGGTTAATGTTCCAGGTACCGGG
TGACCCACGAAAAAGCATAAGAGTTTGGAGGGTAACTGTGTCCGAAAAAA
TTGAATTTTAACTAAACTCTTTTTTCATGGTAAAGAGGAAAGGCAAACTT
GAATTTTGATGTATCATTTTTTTATTTTGGAAAAGTAGTTATCGAGATAT
GGAGGTATAAAGTCAAAAGTCATTATTAAAAACAGTTAAAAAACGTCAGA
AAAGACAGTATCAAATTTGTATCAGAACAAACATCTTTCCTTTGATCATT
TGCTATTTCATTGTCTTAAAAGTTTCGTTAAGAAACAAACATAAGTAATA
TCGAATTTTGGACAAAAATAAAAGGTACCAAAAGTAGCAAAAAGAGTTTT
TAACCTTTGTTATTCTTTTCTGAATCCTTTCGGTAAAAGAAATCAAAATA
TGCTTCTCACTCGATGTCCCTTTTTACCTTATTACATGAAAATAAATATA
GAAGTTTTTAATGGCCTTAAAATTAACACGCAAAAAATTAACACGAATTT
TATTTGCTTTTTTAAGGACACCACGGCTGGTTCTAATTAAGGGTTTTTTT
ATTCACACGAAATTTTTCAATTCGTATTTTCATGCAATAAGGTATTTGTT
AAAGTCTGTCTCGAAATAATTTGCAGCTGGAGACAAAAATGGCTGTAACT
TTTGATAGAATTCGAATCAAGTTGCGATTAAGTGCTTGTTAAAAAGATAT
TCGTGAGTGGAATATTATCAAGTAAAAAAAATGAGAAAAGAAAGGAAAAT
GAAAATGAAAAATGAAGAAGAAAAAAATCAACTTTTTGTAGAAATGTGGT
ATAATTACCATTTTCACAGGAGTGACTCTTCAATCTTAGATCATCATCAA
TGTGAAAAAACTTTTCAAAAATATTCATTCAATCAAAAGATATCAAACAA
AGTTTATTGCTGGTTGACTCTAAAAAATAGTAAAAACTGGTAAAAAACGA
CAAAAAAACAGCCTTTTGTCGATCAACCAGCAATAAACTTTGTTTGATAT
CTTTTGATTGAATGAATATTTTTGAAAAGTTTTTTCACATTGATGATGAT
CTAAGATTGAAGAGTCACTCCTGTGAAAATGGTAATTATACCACATTTCT
ACAAAAAGTTGATTTTTTTCTTCATTTTTCATTTTCATATTCCTTTTTTT
TCTCAATTTTTTTACTTGATAATATCCCACTCACGAATATCCTTTTTAAC
GAGCACAAAATCGCAACTTGATTCGAATTCTATCAAAGGTTACAGCCATT
TTTTTCTCCAGCTGCAAATTATTTCGAGACAGACTTTAATCAATTAATTT
GATACTGTTTTTTGACGTTTTTTAACTGTTTTTTATAATGACTTTATGCC
TCCATATCTCGATAACTACTTTTCTAAAATTAAAAAATGATACATCAAAA
TTTAAGTTTGCCTTTCCTCTTTACCATGAAAAAAGAATTTAGTTAAAATT
CAATTTTTTTCGGACACAGTTACTCTCCAAACTCTTATACTTTTTCGTGG
TATCAATAAAGATATAAAGTTACACCCGCTTCAGTTTTGGTGTATGCCAA
CCTCGTTCCCATGACGATTTGCTTTTTATATAGAATGTAGCAAATTCGAT
TCGATACGACCATCAAAATTATAAAAAAGTGAGAATCAGGCCTTAGGAAA
GAGGCTGGGTACATGCCTTTTTGCAAGAACCAGTAAATTTTTACTCAGGT
TTGGCTCTTCTTTATTTTTTGGAAGTTTTAGGCTTATTTGTTCTTACGAT
GTTCTTAATACGCTTAGTTTCTTTACTTAAAAAGGGTTTAAAATCTGTTA
AAATCATTAGAATCTCAGTAATTTCTGAAATCTTAAGCTCAGATTGTTTA
AGCCGATTTCAAACTTTCTACCTATTTTTTGAATTTTTTTTTTTGATATA
ATTCCACTCCTTTTTGGACCTACCTCCGGGTACCCCGGTGGAGGTTCTAT
AAATTAACCCATGTCCGTCCGTTCGTTCGTTCGTTCGTCCGTCCGTCTGT
TACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTTTTGCAC
AATGATGCAAAATGACAATGTCCAGAACGTGACGGAGCTCGATTTTTGAG
AAAAAATTTATTTGGGCAAATTTGGGCCAAAAACTGCCTAAAAATAGGGT
TTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTCTTGT
ACAAAGATGGAGGGCAAGAATCTCTAAAGAATGGCTGAAGTGGTTTTTCC
CGGAAAATTCTTATTCGCCTTAAAAAACGGATTTTCCGTATTTTGGGGAA
ATTCCCTGTAACCAAATAAGAAAATATAGCTCTTCTCAATGTTGACTCAT
TATTTTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCTAAAA
TGTGTCGGAGCCCGATTTCCGAAAAAAAATATATTTGGGCCAAAAACTGC
CTAAAAATAGGGTTTTTTGGACTTTGTGCAAAATCCTGTCTTTACTTTTT
TCTGATTTTTTGTACAAAGATGGAGGACAAGATTCTCTAAAGAATGGCTG
AAGTGGTTTTTCCTGGAAAATTCTTATTCGCCTTAAAAGACAGATTTTCG
TATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAACATAGCTTTTCTCA
ATGTTGACTCATAATTTTTTTCTGATTTTTTGCACAATGATGCAAAATGG
CAATGCCCAAAATGTGACGGAGCCAGATTTTTAAGGAAAATTATTTTGGG
CAAATTTGGGCCAAAAACAGCTTAAAAGGTTTTTTGGGCCTGAATGGTTT
AAGTGATTTTCGTATTTGGGGAAATTCCTTTTTACCATTTTACATTATTC
AACACACAAGCTTTATTTTTCCATTCTGAATTTTTGTACAATTATTGTCA
CTTTTTTCTTATTTTCATCTGATGTTAATCATTAGGTAGGTCCATTCAGC
ATGTTGCTTGTTGTCTTTTCAACGAGTACAAAACCGCAAATTCGAATATC
CACTCCTGTTTGTCTTTTCAACGAGCACAAAACCGCAAATTCGAATATCT
AATTCGAATTCTATCAAAAGTTGTAGCCTTTTTTTCTCCGCTGCAAATTA
TATTGAGACAGATTTAAGTTATGACCGAACGACTCACATATGCAGAGTCG
CAATACTCGGCATAATAGTGATTCCTATTTCCGTTTGAATGGACTGAATT
TTGAGATATCAGAGGCAATATCTTACCTTTTTTTAGCCATTTCAGTTAAG
GCTTGATTCTAAATCTTTCAGAATCCTCTCTGGATCCCTGACAAGTAAAA
AATATAGTTAAAAGCTCTATTTCCTTCCAACTGGAGAAATTGGCCAAAAT
ATCGTCCCCGGTGGAAAATGATTCTCCAATTTTCGTCCTCACTGAAAATA
ATCAAATAAGCCAATCCTCAATGCAAAATATTATGTTATTTTTACCATCC
TCACTAAATTTTCTGACTTGAAAACAAAAGAATTTAAATCCCCGGTCATA
AAAAATAAGGGAATATCGATCCCCATCGAGTTTTAGTCCGTTACTTTTAC
CCCCACTGGCCCTTACCCCCCAAATTCTACCAGGTCTTTGAGAAGGGGGT
GTATTAATAAATCGAGACGTAGTAAGAATTATTTACAAACCAATGTCTTT
TTTAAGGTGTTTTCGATTCATTTTTATTTGATAGAATGTTTTATGGGGAA
GAGCATTTTACATACCGCCAGCATCAGTGAAAGAAACAATGGATACCTTG
AACTTTCGTGAAAAAGGCGGCTATTCATTGACAAAAGTTCTATTTCAACC
TGACAACGCTAATTTAAAAGAAATGGATGTTTTCCTGTACATGGGCAGCA
AGGGTAACCCAAATTATGCCGGTGAAGAGACGTTAGACAATGTAGCAGCT
CGTATAGCGAAAGCTGTAGGCCCTAGTGGTCCCAATGTTGATTATTTGTA
CAATTTGGCGTCTGTTCTTGAGCAATACCGTGATATGATTGGTGAAGACG
ATAGGGAACATACTTTAGCCTTGAAGAAAAAGGTTGATGTCATTTTATTG
AATAACAAAGTTTAA Coding sequence (CDS) from alignment at sc0000087_pilon:677509..683173- >XLOC_033817 ID=XLOC_033817|Name=XLOC_033817|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1296bp|location=Sequence derived from alignment at sc0000087_pilon:677509..683173- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGATGTGGAGAAAACTGCCGATTTGAATTTCAAGCGAATAATAAA
TCAAAATGAAGATTTCCAGCAGTTGAACATAGAAGTGAACAAAGGATTAT
GGATCTTTGGTTATGGCTCGTTGTTGTGGAAAGTTAACTTTGAATACGAA
AAAGACTTGTTTGGTACCATCAAAGGATTTGCGCGAAGGTTTTGGCAAGA
AAGTACTGATCATCGAGGAACTACTCAATTTATGACTGATGTGGAGAAAA
CTGCCGATTTGAATTTCAAGCGAATAATAAATCAAAATGAAGATTTCCAG
CAGTTGAACATAGAAGTGAACAAAGGATTATGGATCTTTGGTTATGGCTC
GTTGTTGTGGAAAGTTAACTTTGAATACGAAAAAGACTTGTTTGGTACCA
TCAAAGGATTTGCGCGAAGGTTTTGGCAAGAAAGTACTGATCATCGAGGA
ACTACTCAATTTCCTGGAAGGGTTGTAACACTGGTTCCAAGAGAAGATCC
TGGAAGGGTTGTAACACTGGTTCCAAGAGAAGATAATGTTTTATGGGGAA
GAGCATTTTACATACCGCCAGCATCAGTGAAAGAAACAATGGATACCTTG
AACTTTCGTGAAAAAGGCGGCTATTCATTGACAAAAGTTCTATTTCAACC
TGACAACGCTAATTTAAAAGAAATGGATGTTTTCCTGTACATGGGCAGCA
AGGGTAACCCAAATTATGCCGGTGAAGAGACGTTAGACAATGTAGCAGCT
CGTATAGCGAAAGCTGTAGGCCCTAGTGGTCCCAATGTTGATTATTTGTA
CAATTTGGCGTCTGTTCTTGAGCAATACCGTGATATGATTGGTGAAGACG
ATAGGGAACATACTTTAGCCTTGAAGAAAAAGGTTGATGTCATTTTATTG
AATAACAAAGTTTAAAATGTTTTATGGGGAAGAGCATTTTACATACCGCC
AGCATCAGTGAAAGAAACAATGGATACCTTGAACTTTCGTGAAAAAGGCG
GCTATTCATTGACAAAAGTTCTATTTCAACCTGACAACGCTAATTTAAAA
GAAATGGATGTTTTCCTGTACATGGGCAGCAAGGGTAACCCAAATTATGC
CGGTGAAGAGACGTTAGACAATGTAGCAGCTCGTATAGCGAAAGCTGTAG
GCCCTAGTGGTCCCAATGTTGATTATTTGTACAATTTGGCGTCTGTTCTT
GAGCAATACCGTGATATGATTGGTGAAGACGATAGGGAACATACTTTAGC
CTTGAAGAAAAAGGTTGATGTCATTTTATTGAATAACAAAGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000087_pilon | genome | sc0000087_pilon:677509..683173 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 268-648:382 |
| Aaloc | 232-267:4800 |
| Aaloc | 1-231:5666 |
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