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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:193580..199973+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033776 ID=XLOC_033776|Name=XLOC_033776|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6394bp|location=Sequence derived from alignment at sc0000228_pilon:193580..199973+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAAGACAAGAAAAACGAGAAAAGGAGATAGATGACCTTCGAAACCAATT
GAATGAATTAACTGAACGTTTTGAGAACACTCAAATTACTATCAAACAAT
TGACAGCTCAAAAACAACAAGTAAGTAGAGACTTAAAAATATGTGATGTC
ACATCCCTTAAACTTAAATCCTCCTAGGGGAAAAGGGAATTTCTAGTTAA
TGAGTACCATAAAAACTCAAATACTTCAAAACTTCGTAGgccttattatt
tttttcggtTTTCATGAATCGCATTCTTTCCTTTTAGCAACGAGTTTATT
TACAACGACATTAACTTGTATTCAAAAATTAATTCTGGGTTTTGCACAAT
AGAAACATAACATTTGTAAGTGACACAAACATCTTCATTCTTTGAGATAT
TGTTCAGTTTATTCGGGGTTTATTCCTGAAAGATAATTAATTCTCGGATT
CTTTAATTTAGATGGACGAGCAATCAGTGAAAATGGAAACTTCAAACAAA
GATGCTGAAAATGCATACCGTGTGAAAAAGAAAACGTTCGATTTACTGCC
CGAATCTGAAGAAAACCTCAACAAACTGATGGTAATAATATATCATATGT
ACGGTCGGTACAGATTTTTCTTCGATCACCGCAAAAGTTTACCATTAAAT
ACCTTAGATTGGCCAATATGGTCTTAGCTGTAAGTTGATGGGAGCTGAGA
ATAGTTGAATATTATTTTCGCTAAATAGACTCAGGTAGCGAATACTTTTT
GTTGGTTTTATTATTCTTAATGTATTAAAAACTGTGCTTATCAGGGTCTC
GTTTTATATGCACAGCCTTTCAGTGTAAATTAGGTTTAAACTCAGAAAAT
CATTTCCATGTTGATGTAGTTATCAATTCTGtttcctttttcttctttag
CAACTTGTTGAGAACAGTTCCCAGAAGTTGGTCACTCTAAACGAGCAATG
GGAAAAACATCGTGCTCCACTTATTCAGAAATATCGAGAACTGAAGGAAC
AAAGCAAAAATCGTCAAGTATAAAGAATTGAATTTCCATCATACTAGAAG
ATATTAATAGATGGACTTTTCCTATCTTTTTGCTAAAAAACGAAGTTATT
ATTGAGATTGAAGTTTGATATCTAAGATTACTTGTTACTATTATCTTAAC
TGATCTTGGACCATATTTCCAGAtatatttagtttttttaatgaCCTAGT
TAAAACGTCTGAATCAACAATACAGATTTCAGTTACGTGTAGTGCCGAAT
tcattttatgactttattcTTTTCACTTTAGTCCGAAGTAGAAACACGAA
TCGAACAAATTCGCGTTCTTCGTGAAAAGATGAAATCAGTGACTGACGAT
ACTAGAGACAAAGAAGAAATGCTGAAGCAATTGGTAAAAAacataaagtt
ttgaaatcCCCTTACCCTGGCCTTGTATCTCTCTCTGATATTGCGATCAT
TATTTTGACACTTTTGTCTCTAGTCTCTAGCATGTTTAATTTAAGAAAAA
GTAGGTGATGGTGAGGAAAACTTCTAAGGGCATTATTATACAGGGTGTGC
CACAAAATAATCTGAACTTTTGAACTTTGACTTCTAAAAGTGATGGATTG
ATTCCCTCCTTTTAACCAAGTAGCTACGAGATAACCAAAACTATATGGAT
AGGACTTGCTTGTTTAGCTCTTTTGGACAGATGTATATCCAGGCGTTTTA
TCACTGCAACTTTCAGGTCAGCGAATATGAGAGTTTATCAAAAGATGTCA
ATCGTTCATCATACACCAAACGTATACTGGATATCGTTGCAAGCATCAAA
AAACAAAGAGAACAGATTGCCAAGGTTTGACATTTTTACTTGCTGAAAGA
AAGAAGTATTTGGTACAATGCTAAATTTTAGATCAACTCTTACTTTTATG
AAAGATATCGATTTTTATAAAGCACTTTGAGGAGTGTGACGCAGCAGAAA
CACCATTTCCCAGAAGACATCCAAAGTTTTTATGGTGTACATTTTATCTT
TAGATTCTGCTTGATACAAAGACTTTACAAAAAGACATAAATTTCTTGAC
TGGCAAACTAGATCGAACTTTTACCGTTACGGATGAACTCATCTTCAAGG
TATGGTTTACTCCCCCCTCTCCCCGGTTCTCTTGCAAAAGCCATCAAACT
AAGACGATTCAATACTACTGATCTACACAATGTTCTTTGCAATGTGCTGC
CTTTAAAAGACAGTGCTCCTAACGCCTTCAGTATTTGTAATAGTTGAAAT
CCTCATATAAATCTAGCAATCATCGACTCTTCTCTGCTCCACTGTGAAAT
AACATTTGACTACTACACAATAAATAGATAAAACACGAGTGAACGGTCAA
AATCTTGGAAACTCAAAGACTCGAAGGAataagaaatcaaacttttcgaa
tttagCATTCAGTCAGTTTTGATAgacattaaaaatgtttttgttggacc
taccccagaggtcctttaaattaactgatgttcgttcgtccgtttgtctg
ttaccagcttttctcaggattggctttAGAACATTGCCTGTAGTacggct
atcgtaatactttaaAAAGCTTCCaaatgatattcttataattggaAGTG
ACACAAATTCGAGCATTGGTTGTCTCAACAAAACTATTGACTATTATAAT
AACTCTTGTGTGGGACAATTTGGGTTATCGTATGCTAACGATGCCGGACA
TCGTTTCGCCTCCCACTTATCATTAAACGAACTACTTGCAGTGACGACTT
GTTTTCGAAAGAATAATTACGCAACATGGATCCACCCTAGATCTAAATTA
AAACACCAAATCGATCATTTTATCGTAAAAAAGGAACATTTCAAATATGT
GATGGACGCTGGAGTCTCTCAAAACGTGATCGACTCAGACCATTCAGCCA
TAGTATGTAAACTTCGAATGATTTCACGCctcaaaaagaaaacttctCTA
CGAGATCGCCTGATACGTCTTGATTATAGTGGACTGAAAAGTGATGTAAC
CAGTCAAAATTTCTGTGCTTCCGTTATGGAGAATTACAATATTCAACCCC
CTTCAAACAGTCCATATACACGTTTATCTGACTCTGTCAAAGCGACATCT
AGTACGCTTCCACaaaaaaaaGCCTTCACCAGGTTGGTTCACTGCAGCAG
AGGATAGTTTAATTCCATTAATTGAAAGAAGAAACATTGCAATGTTGAAA
CATTTCATagtttgccccccccccccctttttaatagggggggatgccaa
ctttctggagggcctttgtagggggggtaccgagatctgccgaaaaaact
aggggggatgggaatgtaggggggggatcaaataaaaaagggggggggtt
tggaaattttggtcaattttctaatcaaatacaaattgtcacagtttgtg
ttttaaagtaaaaaaaatatgtagttctttcttgttgataattttgctgg
taggtgggaaagcgagtttccttcgaaatggattttctgtaaaaaaaaag
ggggggataagatttcattacaaaagggggggatgggtatataggggggg
atgaaataaacctaggggggttcatacccctctgcaaactatgcaTTTGT
CAAGACCGCTTCGTTCTACCGCCGAGAAGCTGAAACAGGCTAGGAAAGCC
CTAAAGCGTACAGTAGGGAAAGCTAAAAATGAATGGATTTTTTCGAAATG
TAGTGAACTGAATAACGCCTCAAACACAGGGACTAAAGTGTTTTGGGAAA
ATATCAAACAACTCAGTGCTGGTCTGTGTAAAACAAAAGCTAGTGCTGTA
CCATCAATGAAAAAACCGGATGGTTCCATTTGTAAAACTCCGGAAGAAAA
CACGCTCGTTTTTCAAGATCACTTCAAAGCTTTGTATGGTCGTCAACCTA
TCTATGATGACTCAGTTCTCTCCTTACTTCAACCCAAAGAAGCCGTTACC
GGTCTTGATAACTTCCCCACTGATGAGGAGATAGTAAAGGCTACTTGTAA
GCTAAAGAGAAAAGCTCCAGGTGATTCCGGAATTCCGCCACAAGTGTGGA
AATCGATCATTCAAAATGAATCTACttacgaaattttcaaatccgtgatt
ttagactttTGGGAGAATGAAAAACCACCCCTAGAATGGGAGAAAGGATT
GCTAAAGGTTCTTCCAAAGAAAGGAGACCTTAGTATGCCCGGGAACTATC
GTGGCATTATGCTACTTGAAACGTGTTATAAAATTGTAGCTATAATATTG
CATGACAGGCTCCGCCCTGTTGCCGAATCCCTAGACAACGAAGCGCAATG
TGGTTTTCGATCAGGGAGAGGATGTGCGGATGGAGTTTTTACCGTCAAAA
TGGCtataaagaagagaaaagagCACGGCCTTGAATCTTGGGTCCTATTT
TTGGATCTAGTTAAGGCATTCGATCGTGTCCCTCGTGAACTGTTGTGGCA
GGTCTTAGAAATTTTTGGCATACCTGCTAAATTGATTCGCCTTTTAAAAT
CGCTACATGCTCGTGTCGAGGTGAAATTTGTTATTAATGATGTCACAAAG
TCAATTGAAAGTATGATTGGAGTCAAACAGGGGGATATTTTGGGTCCTCT
GTTGTTCATATTTTATCTTGCAGCCGTAATGATATCATGGCGTAATGCGT
ATGATAGACCGGTCTGTATTTTCCATACGAAGTACGATGATGTATTAACT
GGTCGTAGATACAACACAAAAAGAAATATCGAGGAATTCTCTTTACCAGA
TTCGGAATATGCTGATGACACAGCTGTTTTATTCACATCGCGTGAATCGA
CTGAAACGTACGTACCCCTCCTCTTCAATCATTTTAATAGATACGGTCTC
GAAATACATGCTGGCACTGACGAAAAACCCTCCAAATCAGAAATCCTTTT
CGTTGCAGCACCAAAACGCATCTATGTAAATCCTTCTACATACGATGGCT
GCAATCTGTCAAATATTGTTCTACCAGGTGGCGCACATTTACCAATAGTG
GATCGCTTTTGTTATCTGGGCTCTTTTCTGACGAGAGAttgtaatgataa
tgttgatGTTGATGCCCGAATCAATTCGGCAAGTCGGGCATTTGGTAAAT
tgagaaattgtttattttcgTCAACCAGTATTTCATACAAAGCTAAGAAA
TTTGTATACGAATGCATTATCTTGGCTATTCTCTTACACGGTGCTGAACA
ATGGTGTTTAACCGAAAATCTTTTCCGAAAATTACGTTTATTCCATGCTA
GATGTGTACGTGCAATGTGTCGTGTGAACCGGCTCCACACCCGTGTGTAT
AGAATCAGAACGTCTGATCTGTTAAATCGTTTAACTCTGAAATCCGTTGA
TTCGTACGTGAATCGCCGTCAACTTCGTTGGCTGGGTCATGTCGCTCGTA
TGGATCAACAGCGACTACCCAGAAAAATGCTAACTTCGTGGGTGCCATCG
AAACGCCCTCGTGGAGCACCAAACTTCACATATGGAAGAGGAATTTATAA
GTGCTTGAAAAAGGTTGGTTTGTCAAAAGATGACTGGTATCAAAAAGCTT
TGAATCGTCTGGATTGGCGTAAAATTATTAATTCCAAGTAGCatattttt
tgatagttttatctagttacttatttgcataatttttccttttttcgctt
tttattttatctaccTAGCGCTGTGATCTCTATCTTAGGATAGGGCCTAT
TCCCTGTGCTAAGGGAAGGTTTAtctctctctctcATTGCCTGTAGTacg
gctatcgtaatactttcgctaataATTATCTTCTCTGTTTTCCATTTTAG
GATGCTAAAAGGAACGAATTCAGTCGTAAAGCTTACAAACTATTGGCAAA
TCTTCACGAGgtttaaaagcttttttccaTAGGCATCAtatctgaaaata
tttgaaaccccCTATCTGACAGGCAAAGTTATTATGGTGTTCTGAAAGCT
CTCTTGTATGATTTTGCAAAATCATAACCAGACATGTAATTACAGTttac
tctcgctaattcgaactcgaacagaGAATTTTATTAGTTCGAAATACAGA
GACATAACTGAGAATTAGTTGGAATTatggaaagattcgaaaaatatAAA
TGCGAATAAAGCGAGAGTCTACTGTGTCTTTGTTTTATGGCCGTTACGTG
CGTACTTACTtacgtgtaataaggtattctttattttacaaattttttat
aGACATTTGGTAATCTGGTGCAGACGGTTGAGGAGACTGGGCTAATCATG
CGTGAAACACGTGACCTTGAAGAGCAGGTGGACAACATTAATGAAGATGA
AATTCATCAGAACTTAACCAAGATTAGCAAAGATTTGAAGcaaattaaag
aagaaaatagTGAAATGATTTCCAAATTGAAGTCAAGAAAGtag Coding sequence (CDS) from alignment at sc0000228_pilon:193580..199973+ >XLOC_033776 ID=XLOC_033776|Name=XLOC_033776|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1830bp|location=Sequence derived from alignment at sc0000228_pilon:193580..199973+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAAGACAAGAAAAACGAGAAAAGGAGATAGATGACCTTCGAAACCAATT
GAATGAATTAACTGAACGTTTTGAGAACACTCAAATTACTATCAAACAAT
TGACAGCTCAAAAACAACAAGAAAGACAAGAAAAACGAGAAAAGGAGATA
GATGACCTTCGAAACCAATTGAATGAATTAACTGAACGTTTTGAGAACAC
TCAAATTACTATCAAACAATTGACAGCTCAAAAACAACAAATGGACGAGC
AATCAGTGAAAATGGAAACTTCAAACAAAGATGCTGAAAATGCATACCGT
GTGAAAAAGAAAACGTTCGATTTACTGCCCGAATCTGAAGAAAACCTCAA
CAAACTGATGATGGACGAGCAATCAGTGAAAATGGAAACTTCAAACAAAG
ATGCTGAAAATGCATACCGTGTGAAAAAGAAAACGTTCGATTTACTGCCC
GAATCTGAAGAAAACCTCAACAAACTGATGCAACTTGTTGAGAACAGTTC
CCAGAAGTTGGTCACTCTAAACGAGCAATGGGAAAAACATCGTGCTCCAC
TTATTCAGAAATATCGAGAACTGAAGGAACAAAGCAAAAATCGTCAACAA
CTTGTTGAGAACAGTTCCCAGAAGTTGGTCACTCTAAACGAGCAATGGGA
AAAACATCGTGCTCCACTTATTCAGAAATATCGAGAACTGAAGGAACAAA
GCAAAAATCGTCAATCCGAAGTAGAAACACGAATCGAACAAATTCGCGTT
CTTCGTGAAAAGATGAAATCAGTGACTGACGATACTAGAGACAAAGAAGA
AATGCTGAAGCAATTGTCCGAAGTAGAAACACGAATCGAACAAATTCGCG
TTCTTCGTGAAAAGATGAAATCAGTGACTGACGATACTAGAGACAAAGAA
GAAATGCTGAAGCAATTGGTCAGCGAATATGAGAGTTTATCAAAAGATGT
CAATCGTTCATCATACACCAAACGTATACTGGATATCGTTGCAAGCATCA
AAAAACAAAGAGAACAGATTGCCAAGGTCAGCGAATATGAGAGTTTATCA
AAAGATGTCAATCGTTCATCATACACCAAACGTATACTGGATATCGTTGC
AAGCATCAAAAAACAAAGAGAACAGATTGCCAAGATTCTGCTTGATACAA
AGACTTTACAAAAAGACATAAATTTCTTGACTGGCAAACTAGATCGAACT
TTTACCGTTACGGATGAACTCATCTTCAAGATTCTGCTTGATACAAAGAC
TTTACAAAAAGACATAAATTTCTTGACTGGCAAACTAGATCGAACTTTTA
CCGTTACGGATGAACTCATCTTCAAGGATGCTAAAAGGAACGAATTCAGT
CGTAAAGCTTACAAACTATTGGCAAATCTTCACGAGGATGCTAAAAGGAA
CGAATTCAGTCGTAAAGCTTACAAACTATTGGCAAATCTTCACGAGACAT
TTGGTAATCTGGTGCAGACGGTTGAGGAGACTGGGCTAATCATGCGTGAA
ACACGTGACCTTGAAGAGCAGGTGGACAACATTAATGAAGATGAAATTCA
TCAGAACTTAACCAAGATTAGCAAAGATTTGAAGcaaattaaagaagaaa
atagTGAAATGATTTCCAAATTGAAGTCAAGAAAGtagACATTTGGTAAT
CTGGTGCAGACGGTTGAGGAGACTGGGCTAATCATGCGTGAAACACGTGA
CCTTGAAGAGCAGGTGGACAACATTAATGAAGATGAAATTCATCAGAACT
TAACCAAGATTAGCAAAGATTTGAAGcaaattaaagaagaaaatagTGAA
ATGATTTCCAAATTGAAGTCAAGAAAGtag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:193580..199973 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 724-915:6203 |
| Aaloc | 664-723:5801 |
| Aaloc | 568-663:2004 |
| Aaloc | 460-567:1717 |
| Aaloc | 358-459:1282 |
| Aaloc | 241-357:901 |
| Aaloc | 121-240:462 |
| Aaloc | 1-120:1 |
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