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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:186277..193702+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033775 ID=XLOC_033775|Name=XLOC_033775|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7426bp|location=Sequence derived from alignment at sc0000228_pilon:186277..193702+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGATGAGGTTGATAAAATTATCATTCACACTCTGAGACAAATAGGATG
GTAAGTCAAGATatttttttaagatcaaatcatttttttaaatttttgtt
attgaattgattatttttgTATCTTAATCACCCATAATAACAAAGATGTA
TTAAAACAGGCTAGTAAATTTCATGATCCTAGAAATCCTCAGATGTTAAT
AATTTAATGAATTAATTAAATTTAGCCCTTTTTGTATCAAATTTGTTTAC
CAAAcaattaaaattgatttcaagTTTCTATATTATATCAATTAAAAGCT
TCTAAGAAACTTAATCAgaataattttgataaattttaattcTAAATCAA
TTTTTCCAATGAAGTAGGTTTTTAACATGAATGGTTAAAGAAGCAATAct
tattgtttcttttttcttcaagtGATATTTCAGATGCTGTTGTTACAATC
AGGGAGTTTTCTGTGGAACTTGTCGTTCAAGCTGCATCCAAATGTTTGTT
TACTATAAGTGAGCAATATAATATTCCTTCTGCATTACCACCAAGCATGT
CAGCTAAATTCAGGATCGGTTCCTCGTTGGCTGCAGCCTGCCAGGTATGT
TGTGTAATTCTTATGTATGTATTGAACTTCGATATTGTCAATATTGTTAA
tcattgttcattttctttccttttacaTAGTGATTGCaaatgaaatttag
aaattttcgatgttatttatttttaaattgaaagtAACACTGTCAGATAT
CGTTATTTCCATTCTATGTTTTCATTAATAGTAATGCCAAAATATCCCCT
TTATATACAGCCCCTTATAATATTTAAGATGactaaaagtttatttttga
taaagaaatcTCCCATTTTGGATTTTTCCTGCATTGTAACGGTTTCAAGA
TGATTTTTTCTGGGATCCTAGTTTGATTTCAGAGTTTAGTGttaattcaa
tttatttttatcttgcCCTATGAAGTATTTTTATTGGACCTGCCTTAAGG
CGCCCCTATAAATTTTCCTATGAATTTTAACCTGTGTCCGTCCGTCCATC
TATCCATCCATCCATCTGTTATTAggttttctcaggattggctcttTAGA
TCTTTTGTACAATGATGCAAGAGGATAATGCccaaattaaaatgaaaatt
tggctgctatacatgtttttatagaagaatgggccaaattcaatattttt
tcataagcacattaccaattacttagttattagcttttctcgagattagc
tcattcattctttatgattttttacacaaaggtGCATAAGTATGGAAAGA
TAATGTggaaaaaatttgggggcaaattccacccaaaaatggctaaaaaa
ggGATTTCTGGACTGCTGAAAACTGGATCATttatttttccagatttttt
tgcatgaaagtagggtgcCTCATCAATAAAAGTTGGGTGAAGCAGATTtt
catgaaaacatttttctctcCTCAAAAATTGAACCTTTATccataaaaat
aacaatttatAAGCATTCATCAATATTCTTTTTCCTTCCAATCCTTTCCC
TTAGTACCACCCCAATGAACAAAGggaacaatcaatgatgaaaacatacg
aaataataataaatcgtcactatttgtgttccgaatgattgttttaacgg
tcacgctcacgtaaatatcaattatatatgtgtttaaATGCATGACCAGG
TGGGTCCATAAAAATATGACTTGTTTATTCCACATGAATTTGTGTACAAA
ATAACAATTACTTTTAAATGATATTTTCAGGACCTAGGATACAAAGGAGA
GATTGGATATCAAACTTTTCTTTATGCGAACGAGCATGAATTACGTAAAG
TGATGATGTTTCTGATCGAGAAATTACCCAAAGAAAGTGGAGAAACTATT
GATGAACCACTTGGTAGGGTTCGGCTTTACCTTCTTTATAATGTTGGGTT
TGTGTGTGTGCTATCATCCACCAATTATATCTTATGTAATATCGATAGGA
TATCATTTGACATATTGAGCCCTTTGTACGTTGTATCCCAGCTGAAATAA
AATGTAAAGGCAACGTCCTTATCTTATAAACCCATTAGAATAACGGTATG
AATATTGACACAATGTTGTATCTTTATGTAAGTTAGGATGATATTATTGA
ATCAAGGCTTTGATTGTTTTTAGGGAAGGGTGTTCTGCTAAACAGAAGGA
TAGCAGCAGAGCTGAAGAAGCAGTTATCTTTCCCATGGACACCTGCTTAT
TGCAAGAAGAGAAATATGATGAATTCTTCAAACAATAATTGGTTTTTGCA
GGTATCTTCCTTTGCTTCCCTTCCTACTACTTGGCATAATTTATAAAATT
AGAGATATTATATTTCCCACTTACGTTTACGTTTTGTTCTATTTTCAAAG
ACTCTATCTAGCCTATCCGATCAATCTGATTTGTCCATTGCAACCTCGAA
ACAATCAGCACTCATTAGAAGTGTTCTGGAAGTTAGACAATATCTTTGAA
AGTAAAGCATACATAAATACGAAACCTGTATGAGAAAGtaattcattgtt
ttttctaGGGTACATCGTCATTTAATCCTGTCAACACATGTCAACTTCAA
TACCCCATTGGAATGAGCAACccaaagaaaatttctaaaggTATATACTT
TATACATATTTCTTAATTCTACCTTCCCTTGTttcaaaacattattatta
ttcacCGGTTCATATTTTTACGCTCGGAGAAACCTTAGATAGAAAATCTG
CGTTTATTCTGGTTtacttttctcaacttcagttgagctagaatctgaga
ctgtctgtctgtcagccagtctgtctgtctgtcatcTCAAAACTCGAGGG
CAGTctagagacttcaaaaatggtcggattcggctgaaattttgcacact
aagtgaaaaaacaaCTATTATTgtttcttgggtgaatatctgggtgtttt
ttggacctacatACCTCCGGGTActccggtggaggtcctttaattaacca
attcccaccatcaagcatgtttcaatattcaataaaattgatttttaaag
ccagaactattcaaaaattgccggaacaacctattttcgctggaaagaca
gtatttcttgaatttctcgagctgtactttatatttttttatgaaatttt
gcacactgatgcaaaactgtgcaaaatgacaatacctaaaatgtgacgga
gcccaattttcgaaaaacatttttttccggccgaaaatgccggaaatatg
ccggaaaaaccgtttttttttacattttctcgaattttcatccttatttt
tctctgattttttgcagaatgatgtgtattcgcaatgctcaaaacatgac
cgagttcgatttttgagaaaatgttttttccggccaaaaaagccggaaat
ttccgtttttgcagattttcattggattttttcgtttcatgtctttgttt
tttttcaaacaaaaacatcatttataagaatgtccacgattaagcatggt
tcaattttcaatgaaactgattttggtaaaggaactttctaaaaatcgcc
agaacagccgagaatcgccggattccatgaatttctcgagttgttctcgt
attattctgcattttcatactattcttctcatttttcaattgtcttatta
catcaatcttcaggtaggtccattcagcatgtagcttgtttttcttcatt
ttttcaaaattttgattttaagggCCTGGTCGTGAGTTTTAGCCttaaaa
cgaggctaaaaatttttgggcccactggagacttcaaaaattgtccgatt
ggctgaaattttgcacacttgttccttgggtgaatatctggggttgcttt
ttcatattttaaattttttgattttttctggcCTGGAGACTAATCTTTGT
GCTACACTGTGCTACATATGGGCCTACGAGGAATtgaaaagatactgaag
ttgagcaaGTGtggttactcttaggtgccaaataaacgcccccccccgct
tgttaatttttcgaaaatgcctgactttagcctatatttaccttaatttt
gggttttcagaagtacaatttccgacccccccggcaattaggtccccccc
cccgtctattaaaatttcgtaaattttccaacccccccgtctattcgaac
ccccccgtttattcgaaccccccgtctatttggcacctaagagtagcaCA
TTTTCTATGATATGTAGAGGAAAATATGCTTTTTTATGTACCAACAAACA
TAAATCAGAAAGGCAATATTTGCTAGCCGTACGATTACTACTAATAACTG
TGGAATATAAACTAACGCCATGAAATAATGGCTTGAGTTTGTTTAGGTGG
GTATCAAAACAAATGAGAGAGAATATGCAACCTTAGGGGTGACCAAGCCA
GTAGTAAACAATCTTACTGTTCTTCTTCTTCGtagaagacaaagaagcat
ttgggcaaatgaaatatatttgcaatcaaccaatcaattctCGTGATCTT
TATGCATCTCTGGCGGAAGAGAACTCCTGTTTGGTTGCCAAAGAACGAGA
ATGGGAGAAAGAGTGGAACCAATCTGGAATCATGTCTCGTCTCACAGAGC
AGGTATACCAGAATACAATTGCAACTTCAATCGCAAACATAATATTCTAC
GAAATGGAAGGTATCCTCGACTCCAAAAGTCTAAAGTAACCTCACTAGAG
CAAGCATATACTCTTGGTTGGCTACCTTGAAATCTTTCTTAAAATGACCC
AAAATTGAATTCTACAAAAATTCACAGACCGTTATACCCtttgaagtatt
tttgtcaTAAGAGCTTTGTCTATCCTAACCTGGTCACCAACTACACAAAT
CAAATAACGTTGCATGGACGTTAAAAGAGCGTCACAAGGacgttaaaaca
ttttttgttgatgTTAGATTGACATTATTATTACGTTGTGGTACCAGCAT
CATCAAGtgTttttttctcttttggacctaccccggtggaggtcctataa
attaacctttctccgttcgttcgtctgttcgttcgttattaggtttcctc
atgattggctcgttagtttcttctgattttttgcacaaagatgcataact
ataaaccctcgaatgtgacggagcccgattttcaaaaaaaaaaaaaattt
gtattagCTTTTTTCGAGAtaggctcttttattctttatgattttttgca
caaagatgcacaactataaaccctcgaatgtgacggagctcgatttttgg
aaaaaaaatttggggtaaatttcagctaaaaaagggctaaaaaagggttt
ttttggatttgttattttctgactttttgcatgaaagtaggtaaaagatg
gctcaagcagatttttgtaaaaaaaaatttttcagctcaaaaaacgcata
tttatctataagaatcacaattaataagcatacatcaatgttcttaaaat
tactgaattttttgatgagatgtttttttgctctcgaagtcttgaatatg
aaagaatatttcaagagcatgaaattttggtttcttaacgtgatttttta
taagaaacgactaattttaatagatcgtcactatttgtgttctgaatgat
tgtttaatggtcacgctcacgtagatatcaattatatatgtgttaaatgc
ataaccaggtaggtccataaaagtatcacttgttttttttaggaatataa
aaatcaaaagcGTGAGCGTCTGTTGAAGAAGATAAAAGAGAAACTACGTT
ACAATGTTGAGAATGAGACTTTGAGCAATGTCGCATCTGGAACCAAATTA
AATGATTTGCTAGATGCCATGTCAGGTATGATTTAAactgatatgatatg
atatctTTCCATAAATTTCCAATTTAAGAATCCTCAAATAATGTATAAAT
AATAGAAAAGCTATTAAAACATCAAGTCACAGAACAAAAATAGACATTCG
TTTGATATAAGTTAGGAAGGAGTTTCTTACAAAGAGATTCTTCTAATTTC
AATCTAAAACCAAAGCatactttatttcattttcaatttttcaaggtAAA
AACAACCAAAAGTCAGGAAAAGGCTCAAGATTCACTCATGCTGAAAAACT
ACAATTTGCTCCTGTAAGTTTTTAAACTTATCTGAATAACGGTAAACTTT
TTGGTTGACacaaattttgatgaaacaTCTAAACAGATTTTAATTGTAAC
ggttaaaattccaaaatttgaatgATCATAGACTAAACTATTCTAAGTAA
GCATGGTGGTCTAAATTTGAAGGCCTTACAAACGCGTGCCTGCATGTTAA
TTTTGTCGAGGCTGATTTTGTCGAAGCTTTCGATTTTGGGATGTAGGGGC
TAGGAAGCGATTAAAAATATCATTCACAAGGGTTTAGTTGATTCTCGTTA
AATCCTTAGTACtttgctattcatgatatgcaccattacaatgtctcCCA
CGGGTCTAACAGcattggttgaaagtaacgtattgactgattttacgtca
cttacatccaatcagctattgggtccgtgatgcaatgtcagaagacattg
caatggtgcatatcatgaattacgcACCGACCTTTATATATATATCCCtt
gaccaagctatatccgccatctttgactggagtttttttggaattggtac
ccgagaagaagccattgcagtgttaaagaTTAACGTCTAatggcgctaca
tcatcaaaagtttttgaggGAGAGTATTTCTAACGTCATCGATACATTTA
CAcggctattgagtagtgccaccattagggtaccacttttcaaaaaactc
cgatcaaagacaCTGCTTGGCagagattgagaaacttggtccagggtata
taaaggtcagtggaatTACGTTTGATTGGATCGCGGTGATCAAATTTAGA
ACGCCACGTAGGCAGGCTATAAATCCTTCATGAGTCATATTCGCAGGTAC
CAGATGTAATTGTGCTTTGTGTTCTTTTTCTTCTCTAAAGGATGAAGAAG
TGGTTGCCGCACGAACACAGCAAAAGaaagaggaagaagaagaagctcAG
CAAGAAACTGAAGAGGTAAAACTTACGATagtttctttaaaatatttcaa
acgattCTTGTAATCATGAACATATTCTTACAAATACTTCTTTCGTAGac
ttaagatttttaaaatgatgATTTGGAACTCGTATAGGCAAGATTTTACG
CCCAGGCTGTCATTTATAATGGAAAACAGACTAGAGCAATCGTACAATCC
TCAGTAGCCAACTTAGGTAAAAAATGTGAATTATTCTCTTCATTTACTTC
TAGGAAAGACAAGAAAAACGAGAAAAGGAGATAGATGACCTTCGAAACCA
ATTGAATGAATTAACTGAACGTTTTGAGAACACTCAAATTACTATCAAAC
AATTGACAGCTCAAAAACAACAAGTA Coding sequence (CDS) from alignment at sc0000228_pilon:186277..193702+ >XLOC_033775 ID=XLOC_033775|Name=XLOC_033775|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2262bp|location=Sequence derived from alignment at sc0000228_pilon:186277..193702+ (Clytia hemisphaerica_ch_hm2_pilon)
atgGATGAGGTTGATAAAATTATCATTCACACTCTGAGACAAATAGGATG
atgGATGAGGTTGATAAAATTATCATTCACACTCTGAGACAAATAGGATG
tGATATTTCAGATGCTGTTGTTACAATCAGGGAGTTTTCTGTGGAACTTG
TCGTTCAAGCTGCATCCAAATGTTTGTTTACTATAAGTGAGCAATATAAT
ATTCCTTCTGCATTACCACCAAGCATGTCAGCTAAATTCAGGATCGGTTC
CTCGTTGGCTGCAGCCTGCCAGtGATATTTCAGATGCTGTTGTTACAATC
AGGGAGTTTTCTGTGGAACTTGTCGTTCAAGCTGCATCCAAATGTTTGTT
TACTATAAGTGAGCAATATAATATTCCTTCTGCATTACCACCAAGCATGT
CAGCTAAATTCAGGATCGGTTCCTCGTTGGCTGCAGCCTGCCAGGACCTA
GGATACAAAGGAGAGATTGGATATCAAACTTTTCTTTATGCGAACGAGCA
TGAATTACGTAAAGTGATGATGTTTCTGATCGAGAAATTACCCAAAGAAA
GTGGAGAAACTATTGATGAACCACTTGGACCTAGGATACAAAGGAGAGAT
TGGATATCAAACTTTTCTTTATGCGAACGAGCATGAATTACGTAAAGTGA
TGATGTTTCTGATCGAGAAATTACCCAAAGAAAGTGGAGAAACTATTGAT
GAACCACTTGGGAAGGGTGTTCTGCTAAACAGAAGGATAGCAGCAGAGCT
GAAGAAGCAGTTATCTTTCCCATGGACACCTGCTTATTGCAAGAAGAGAA
ATATGATGAATTCTTCAAACAATAATTGGTTTTTGCAGGGAAGGGTGTTC
TGCTAAACAGAAGGATAGCAGCAGAGCTGAAGAAGCAGTTATCTTTCCCA
TGGACACCTGCTTATTGCAAGAAGAGAAATATGATGAATTCTTCAAACAA
TAATTGGTTTTTGCAGGGTACATCGTCATTTAATCCTGTCAACACATGTC
AACTTCAATACCCCATTGGAATGAGCAACccaaagaaaatttctaaagGG
TACATCGTCATTTAATCCTGTCAACACATGTCAACTTCAATACCCCATTG
GAATGAGCAACccaaagaaaatttctaaagaagacaaagaagcatttggg
caaatgaaatatatttgcaatcaaccaatcaattctCGTGATCTTTATGC
ATCTCTGGCGGAAGAGAACTCCTGTTTGGTTGCCAAAGAACGAGAATGGG
AGAAAGAGTGGAACCAATCTGGAATCATGTCTCGTCTCACAGAGCAGaag
acaaagaagcatttgggcaaatgaaatatatttgcaatcaaccaatcaat
tctCGTGATCTTTATGCATCTCTGGCGGAAGAGAACTCCTGTTTGGTTGC
CAAAGAACGAGAATGGGAGAAAGAGTGGAACCAATCTGGAATCATGTCTC
GTCTCACAGAGCAGgaatataaaaatcaaaagcGTGAGCGTCTGTTGAAG
AAGATAAAAGAGAAACTACGTTACAATGTTGAGAATGAGACTTTGAGCAA
TGTCGCATCTGGAACCAAATTAAATGATTTGCTAGATGCCATGTCAGgaa
tataaaaatcaaaagcGTGAGCGTCTGTTGAAGAAGATAAAAGAGAAACT
ACGTTACAATGTTGAGAATGAGACTTTGAGCAATGTCGCATCTGGAACCA
AATTAAATGATTTGCTAGATGCCATGTCAGgtAAAAACAACCAAAAGTCA
GGAAAAGGCTCAAGATTCACTCATGCTGAAAAACTACAATTTGCTCCTgt
AAAAACAACCAAAAGTCAGGAAAAGGCTCAAGATTCACTCATGCTGAAAA
ACTACAATTTGCTCCTGATGAAGAAGTGGTTGCCGCACGAACACAGCAAA
AGaaagaggaagaagaagaagctcAGCAAGAAACTGAAGAGGATGAAGAA
GTGGTTGCCGCACGAACACAGCAAAAGaaagaggaagaagaagaagctcA
GCAAGAAACTGAAGAGGAAAGACAAGAAAAACGAGAAAAGGAGATAGATG
ACCTTCGAAACCAATTGAATGAATTAACTGAACGTTTTGAGAACACTCAA
ATTACTATCAAACAATTGACAGCTCAAAAACAACAAGTAGAAAGACAAGA
AAAACGAGAAAAGGAGATAGATGACCTTCGAAACCAATTGAATGAATTAA
CTGAACGTTTTGAGAACACTCAAATTACTATCAAACAATTGACAGCTCAA
AAACAACAAGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:186277..193702 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1009-1131:7304 |
| Aaloc | 934-1008:6991 |
| Aaloc | 868-933:6048 |
| Aaloc | 733-864:5693 |
| Aaloc | 568-732:4438 |
| Aaloc | 484-564:2559 |
| Aaloc | 358-483:2176 |
| Aaloc | 223-354:1781 |
| Aaloc | 52-222:424 |
| Aaloc | 1-48:1 |
|
