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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000228_pilon:114658..117321+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033773 ID=XLOC_033773|Name=XLOC_033773|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2664bp|location=Sequence derived from alignment at sc0000228_pilon:114658..117321+ (Clytia hemisphaerica_ch_hm2_pilon)
atGACTGTACTGTCATTTTTTGGTTGCACATTCATTGCATTTGGACCATC
AGTGGCAATGTTTGCTCTAACTGTGGCTCCTGATGCACAACAGGTCATTG
TTTTCATCAGCAGGTgagaaataataaaattttgataataattaatttaa
aatttAaaaatttttgttttagttaattctaggtaatttCAAGAAATATT
CAGAGGCTATTTAGAAGGATCAAGCACAGGGACACAATTCATACTTTGGT
ATTGTCTCTCTAGGCGCTGACAAGccccattttcatttttccaTtttgag
tttcatatatatatattttcctaATCAAGATCTCTTGTTGAATAAGTAAC
TCTAGCATTAAAGCTACGCACATTAGTAAAAAACTGTGTAAAAGTgtgta
ctttatattttcttgatgcaggagttttttaatttattcaacATGAAATT
ATGATGACTTATGATTAGGAAAAGTCGATTTTGTAACGTGTTCTTTTTTA
CTTAATAGTGCTTTCTGCTGGTTACTCTCATTGCTGGCAACTTCATTACT
ATGGTTAGGTATACAGCATGTTGTAGGGCGGTTGATTATCATGGTCCTAA
TATCAGTTTTATTTCAAGAATTATTCAGATTTGTATTATGGAAAATTGTC
AGGTTTGTCTGTTGTTATATTTTTTCAGATACATTATCTGGTAGTCTGTC
GTGTTACGTATCATTATAGATATTTTTCAACAATAAGAGGAGGTCTATTT
TGGGACAGGGAAGCAATCAATTTTCTAAGGTCCCCCCAAATTGAAAGGTA
GTATCAAAAACTAGTTAAAGGttaaaaaatgtatttcattCTAAATTTGA
ACCAGTGAAGCTTTAGTTATTGAACCTATTGCTCGAgattttgtttattg
ttttttagGCGGGCTGAAGCAGGCCTTATTGAAATGACAAACAACCACTC
TCCGTACAGGAAGCTATATTTTCATTATGGTCAGTATGAtaaactttttt
ctcaaaaaacctCATTGCAAATGTATGACCTTGTGTGTCGTAAGTCTTGT
TGTCTATCCGAAATATTTATTGGCAGGCTGAAGACTTCCAAATTCTGTTT
TGTCAGCAATTTAGCATACCTTCTTAACTGTTTCCTAAAATTCTCTTCAT
CCCTTGTGGTGCGCAtgttcaaatattttattttcaggatACAGGAAGGT
CTATTTCCCAGATTAATTAAATTACCAAAACTTCTGTTTCTACTTTGTAG
TTGCTGGACTTGGTTTTGGCTTTATGAGCGGTTTATTTGCAATGGTCAAT
ATTCTAGCAGATACATCAGGTCCTGGAACTCTAGGTCTCAATGGTCATGA
TCCAAACTTTGCTGTCATATCAGGTGAGTCACATTCTAACTAAAAGTTTA
TACTTCTTGAGATAAAACATTAAAAGAACAAGCTTATTAAGAAACCAATT
TGTAGAAAGTTTATTTGCGAAGGGATAAAGAGCTTCACAACCCAAGTTCT
TATTTTAAATGGTGTATCGTGTACACATGTACGCCAGTTTCTCAAGGTCT
TACTAAAATTAGAAATTGCAGAACTTAAGGTAACAAGTATTTTGTTTTAA
AAGAGATTCCAGCTACATAAAATGTATTAGAGTTGGTAGGCTTTTACAcc
atattattttgAaaatattgcccttttAaaataaaaaattcgatTTGAAT
ATAATCACTTCTTTTTAGCTCGAATTTGTCTTATTTTCATTCACAAATCT
TGCACTGTTTTGACTATGACTagtgggctcttccagaaaatgtccgtgcA
TGGGggaggggtagtgaaaaatctacaaaatttgccttgtccggggggtc
aactgatgcttgtccacgggggggggggtatacCTGctatcaaaagtcac
aatgcccggggggtaaattttcaaatatccaaatatcctccaccccccat
attcaaattttttctggaagagtccaTACGGCATTAATAGTCAAAATTAT
ACAATTTTGCCTTTTTAGCCActctttgacatttttgaacaGAGAAAGTT
GCAGGCTATTCTTTATTAATGATTTACAATTTCCTTGTcttcttttatta
ttttcagcatttttaacGAACTGTATGATCTTGCTGAACACGTTTTGGGG
AATTGTATTTTTTGAAGGATTAGATTATCGTAAATGGATACATATCATTG
CAGTACCAGTTTCACATGTTTTAGTATCATGTTTGGTAAGTATAACGAGG
CAACCTTTATTTGAGCTCTTTCTTTGGCTGTATCTTTAAAGGATAACCTT
TCCTCGAACAGACACCATAAGACCTCTTGAAGTGTTATAATTATAATGGG
AAAATTCGAAGGTTTCTAcgttaagttttatttttggaaattttcattga
gattttaggctttgctacctgtattttttctcattttttctcagattatc
atcgttaaatcatcttttatacatcatatttttttcattttcacagacTC
TTCTCAATGAACAGCAAATATATTGGCCAGCATTAACTGTAGGTTACACA
CTAACTGTTATTTTTGGATTATGGAGTTATTTATGTGTCGGTGGAAGTAT
AGAAAATCTGAAACGTGTTTTTACTGCAAGACATACATCGACATCATTGC
TCGATAATAATTGA Coding sequence (CDS) from alignment at sc0000228_pilon:114658..117321+ >XLOC_033773 ID=XLOC_033773|Name=XLOC_033773|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1494bp|location=Sequence derived from alignment at sc0000228_pilon:114658..117321+ (Clytia hemisphaerica_ch_hm2_pilon)
atGACTGTACTGTCATTTTTTGGTTGCACATTCATTGCATTTGGACCATC
AGTGGCAATGTTTGCTCTAACTGTGGCTCCTGATGCACAACAGGTCATTG
TTTTCATCAGCAGatGACTGTACTGTCATTTTTTGGTTGCACATTCATTG
CATTTGGACCATCAGTGGCAATGTTTGCTCTAACTGTGGCTCCTGATGCA
CAACAGGTCATTGTTTTCATCAGCAGTGCTTTCTGCTGGTTACTCTCATT
GCTGGCAACTTCATTACTATGGTTAGGTATACAGCATGTTGTAGGGCGGT
TGATTATCATGGTCCTAATATCAGTTTTATTTCAAGAATTATTCAGATTT
GTATTATGGAAAATTGTCAGTGCTTTCTGCTGGTTACTCTCATTGCTGGC
AACTTCATTACTATGGTTAGGTATACAGCATGTTGTAGGGCGGTTGATTA
TCATGGTCCTAATATCAGTTTTATTTCAAGAATTATTCAGATTTGTATTA
TGGAAAATTGTCAGGCGGGCTGAAGCAGGCCTTATTGAAATGACAAACAA
CCACTCTCCGTACAGGAAGCTATATTTTCATTATGGCGGGCTGAAGCAGG
CCTTATTGAAATGACAAACAACCACTCTCCGTACAGGAAGCTATATTTTC
ATTATGTTGCTGGACTTGGTTTTGGCTTTATGAGCGGTTTATTTGCAATG
GTCAATATTCTAGCAGATACATCAGGTCCTGGAACTCTAGGTCTCAATGG
TCATGATCCAAACTTTGCTGTCATATCAGTTGCTGGACTTGGTTTTGGCT
TTATGAGCGGTTTATTTGCAATGGTCAATATTCTAGCAGATACATCAGGT
CCTGGAACTCTAGGTCTCAATGGTCATGATCCAAACTTTGCTGTCATATC
AGcatttttaacGAACTGTATGATCTTGCTGAACACGTTTTGGGGAATTG
TATTTTTTGAAGGATTAGATTATCGTAAATGGATACATATCATTGCAGTA
CCAGTTTCACATGTTTTAGTATCATGTTTGcatttttaacGAACTGTATG
ATCTTGCTGAACACGTTTTGGGGAATTGTATTTTTTGAAGGATTAGATTA
TCGTAAATGGATACATATCATTGCAGTACCAGTTTCACATGTTTTAGTAT
CATGTTTGacTCTTCTCAATGAACAGCAAATATATTGGCCAGCATTAACT
GTAGGTTACACACTAACTGTTATTTTTGGATTATGGAGTTATTTATGTGT
CGGTGGAAGTATAGAAAATCTGAAACGTGTTTTTACTGCAAGACATACAT
CGACATCATTGCTCGATAATAATTGAacTCTTCTCAATGAACAGCAAATA
TATTGGCCAGCATTAACTGTAGGTTACACACTAACTGTTATTTTTGGATT
ATGGAGTTATTTATGTGTCGGTGGAAGTATAGAAAATCTGAAACGTGTTT
TTACTGCAAGACATACATCGACATCATTGCTCGATAATAATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000228_pilon | genome | sc0000228_pilon:114658..117321 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 580-747:2497 |
| Aaloc | 454-579:2110 |
| Aaloc | 331-450:1253 |
| Aaloc | 259-327:910 |
| Aaloc | 115-255:510 |
| Aaloc | 1-111:1 |
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