XLOC_033702 (mRNA) -

Overview
NameXLOC_033702
Unique NameXLOC_033702
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000067_pilon:452928..454344+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033702 ID=XLOC_033702|Name=XLOC_033702|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1417bp|location=Sequence derived from alignment at sc0000067_pilon:452928..454344+ (Clytia hemisphaerica_ch_hm2_pilon)
acgCGAAGTCGTAATGCTGGAAAAAAGTTGGCAAATACTTCCCCTGACCT TTCAGTATGTTTTAATCATTTAAGTTTTAATCAAAATGTATACTTGTCAA AAAGGATTTGATTTTTAATGGATTATCAACCGAAAAGCATGTCTCTCTTC GGAAACATTGCAATACAGTGTGTCCAGAAAAAAGTGGAAATTAAAAGTAG GTAGTAGTAATTAACAAGTGTATTTTATTGTTCTACACTGTAACAATTAA CATCTAATGATGTCAATTTTATAACTGGTCACTACGTGGCATCAAATATC CAAAAAGACTGAGTAAACGTTTCTTTTCCGACACAATTATCCAAACGAAA ATGGACTTACAATACATCGATGACTGTTGACTGCTTAATCTAACACCAGA TTTTTGCTCTTAGGTCAACGGCGATGCATACAAATATTGTCTTAGCAAAA CTGATCCAGATTATTTAGTCAAACGGTACATAGATGAATTCATTGGTAAG TCAAGAATCTTCGGAACTGTGTACCAAGTTTCTAATGCTTTCTTAGTTCT TTTTGTGGTGTTATTATGAATAAAAGTGGGAGATGCACAGCAAAATGTAG GCTACTTTATATCTCCTACCCTCCGAGCGTAGCCGATTACGTCAGACCTG TATTCTGTGGGGCACCTATATCCTGTGGGACAGGGCctgtatttgaaaaa taattatatgTATTTGCataaaacaatttcatttctgCGCAGAACACACG GATTATCTTTTTTGGTATTTGCTCCCTTTTCCCGGATCATGGTGttataa aaaatgacatttaaaaatataaaccttACCTTAGGTTATGGGGTGTTTGT GACCAAAACTATGTCGCCATCATCCTTCATCTGCGAGTATCCTGGAGATA TCATCACAGAGGAAGAGAGAAACCGAAGAGAGGAAATTTATACAGAGCAG CGGTTAGGAAGTTATGTTTTTGATATTGAACATGACAAGAAAATGTACTA GTAAGTATTAGGAAGTTGTTTGCATAAATTGAATTATATGGTGGCTGCTT TCGTAATTTTATCACTATTGAATTTAGGATTTTTAATTCGGGCTTCCACG ATTGTGCACaaaaaaaGATCACGTCTTGCCCTTTCTATTTGAGAAATAGC TTGAATTCTCTTGAAGATCATATAATTAGGCTTCATTATGTTACAATAAG TACTTTTTCTCTTATCAGTATTGACGCAACACacacttttgagaaaattg gAAGATATATCAACGATAGCAAACTGTATTTTAACGCTAAAATGGTGGTT GTATTTTGGGACGAGAGACCTCATCTGTGTCTCTTTGCAAGCAATCAAGG CATTGCTGAGGGGACGGAAGTGAGATACTCCTACGGCCCAATCAAGGGAG CATCTTGGCggaaaaag

Coding sequence (CDS) from alignment at sc0000067_pilon:452928..454344+

>XLOC_033702 ID=XLOC_033702|Name=XLOC_033702|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1002bp|location=Sequence derived from alignment at sc0000067_pilon:452928..454344+ (Clytia hemisphaerica_ch_hm2_pilon)
acgCGAAGTCGTAATGCTGGAAAAAAGTTGGCAAATACTTCCCCTGACCT
TTCAacgCGAAGTCGTAATGCTGGAAAAAAGTTGGCAAATACTTCCCCTG
ACCTTTCAGTCAACGGCGATGCATACAAATATTGTCTTAGCAAAACTGAT
CCAGATTATTTAGTCAAACGGTACATAGATGAATTCATTGGTCAACGGCG
ATGCATACAAATATTGTCTTAGCAAAACTGATCCAGATTATTTAGTCAAA
CGGTACATAGATGAATTCATTGGTTATGGGGTGTTTGTGACCAAAACTAT
GTCGCCATCATCCTTCATCTGCGAGTATCCTGGAGATATCATCACAGAGG
AAGAGAGAAACCGAAGAGAGGAAATTTATACAGAGCAGCGGTTAGGAAGT
TATGTTTTTGATATTGAACATGACAAGAAAATGTACTAGTTATGGGGTGT
TTGTGACCAAAACTATGTCGCCATCATCCTTCATCTGCGAGTATCCTGGA
GATATCATCACAGAGGAAGAGAGAAACCGAAGAGAGGAAATTTATACAGA
GCAGCGGTTAGGAAGTTATGTTTTTGATATTGAACATGACAAGAAAATGT
ACTATATTGACGCAACACacacttttgagaaaattggAAGATATATCAAC
GATAGCAAACTGTATTTTAACGCTAAAATGGTGGTTGTATTTTGGGACGA
GAGACCTCATCTGTGTCTCTTTGCAAGCAATCAAGGCATTGCTGAGGGGA
CGGAAGTGAGATACTCCTACGGCCCAATCAAGGGAGCATCTTGGCggaaa
aagTATTGACGCAACACacacttttgagaaaattggAAGATATATCAACG
ATAGCAAACTGTATTTTAACGCTAAAATGGTGGTTGTATTTTGGGACGAG
AGACCTCATCTGTGTCTCTTTGCAAGCAATCAAGGCATTGCTGAGGGGAC
GGAAGTGAGATACTCCTACGGCCCAATCAAGGGAGCATCTTGGCggaaaa
ag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_033702XLOC_033702-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000067_pilongenomesc0000067_pilon:452928..454344 +
Properties
Property NameValue
Aaloc316-513:1220
Aaloc151-312:837
Aaloc67-147:414
Aaloc13-66:1