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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000256_pilon:320189..324533+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033662 ID=XLOC_033662|Name=XLOC_033662|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4345bp|location=Sequence derived from alignment at sc0000256_pilon:320189..324533+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacatcTGCAATCCCTCGATCACCTTCAAGTGATGCATTGGTTGATGA
ACGATTGATGAAGTTTGggtaagaaatatatttttgtgtCTATTTTTTGT
CTGTAAAAGGAAATCCGTCCAGTTCAATTTTCTCACATCCATGgaaaagt
caaaagaaaagCCTTTAAAGCAGAATTTTCGAGAAATTGGAGTCACATGT
TCGATTTTTCATCCAGATTAACCAAAGCTGTTTACAACACTGATTTATTG
TTTAGCATTCAAATCAGGGTGTTAACATGATTTTATTTGAATGTTAACAA
TTATTGTTCACTCAACTTTGCCTTCACATAGAAATCATGTCAGAAAATGA
ATTTAGTGAATGTGGGAGATGACAATTGATTAAAATTGAGTTTactatat
tttttttgctttgagtGTAATTTCCACATGTTAGCGAAAGTGAGTGCACT
AACCTCCTCCACATGCTTGAGCTTTAAATATATATgcaaatgtgtttttt
ttaatttgttacaaATTATCAAGAGAGGAAAAAATACCTAGAACACTCGG
TGGGGACAGTGACTAGTAGACTGTTCATCAATCCTAAAGGTATAGTTAAG
TACTCCGACCACCCGTATCGAAATTGAAAAGCCACCCCGTTACTGAAATA
CCACATGTAAATGCGctttatctaattttttttttattagatgGTATCAT
GGAGTTGCGTCAAGGGATGATTCTATGAAACATCTTGATGGAAAATCACC
AGGACTTTATCTCgtcagaaaaaggaaaggaACGACTGGAGAATATGTTT
TATCTGTCAGGTAcctttcatttttagaatcactCTCTTTTCAATTAAAT
GCCTAAAATATGATCGTTTTCtctattttcattcaaaaaggtCATTATTG
GAGAGTTCTTTCGTATGCCCTATCCCTATTCTTGGTAAAGAATTGCGATT
TCTCTTACAAGATAAATCTGACAAATCAAATCGTATTTAAAGTTTGTGTC
GTGACAATCCCATTGAactttattgtattttttagtGAAATTCAGAAAGT
GTGTCATTACATTATCCAAGATGTCAATGGGATGTATTTCAAGATTGGCG
AACAACGTTTCGCTGACATTCCCTCAATCATTGAGTTCTATAAGAAGCAT
ATGTTGGACACCACGAACCTTATCGAACCTGTACGTAACGATTTATATAT
ATTCTTTCACAGATATCAGATTCTTTTACACACCAGATATATGCTAACTG
CTCACAGTCCACCATGTTGTTTCCCAATTTACTTTAGATtttcaaacgtt
cgaatttcaaaacattcgagtCGTGTTGTCGTGTTGTCGAGCTTTTTTGA
CGACCAGAatttaaaacaagatggcggactagtcagCTCTAAACCTGGAC
ACGTTTCCCATAAACGGATAGACCGGTCCAGTCAAATAGTTCGAGATCAG
TGATAGTATTATTCTCATATGAAGAAGGAAAAGGTTTTCTTAAAGATTCT
TTTCTTTGAAACTGTTTTGAATTCCTCGATTATTATTGATTCTTTTTCTA
GCTTTTTTCTAGTCTCATTTAATTGATATCAGAATAAGACGATCTAGTAT
TTCTTACTTAAAGCCACAAACCTATCTTATCTTTACCATGTAAAATCATT
TCAGGCATTGCGTCCAGGTGCAGCACTAGATCCCAAGTTAGGATCATCTA
CAACAAACAACACTTCTTCGACCAGCAATGACATTGTCAAAGTCAAAGCC
AAGTTCAGTTTCCCTGGAAAGGTAACTAGGATTCCAAAATGTTTATTTGA
CTTACGAAAATGATCGATAAGTTAACAGTAGTCTAAAGCTTGGTTTATGT
AAAGCAAATTTAGAAACATTTTCAGCGACTCAGCGACTCAGGAGTGATCT
CGCGTCAATACAATGTCTCCAAAAGTTTTGTTTATAGGGTTTCGCTTGTA
AAAATTGCTTGGATTTTTTAAAGGTATTGTGTTTTAGAAACCTGCATATG
AAAATGCAACGTTTTAATCTAttaatgataaaataaaatctatctaaTAA
AATCTATAATTGATAACAGTCAGCCTATCATTCCCCAAATGTCTTTTTAA
GTAACATCGAAGACATGGCTACACGTTTTTTGGTATAAGCATAGGGTTCA
TTTGAATCACAAAGACGCTTTGAAACTTTATTTAAAATACATCAAATTCT
GATGTGAATTTGGAATGGAACTCAGAGCAAAAACAATTATCATAAATGAA
TTGTTCAATCCTTAGGATCCCAAAGACTTTTCCTTAAAGAAACACTCTTT
GCGATCATAAGAAACACTATCGTAATTAATCCAGAAGACTTGCCCTTAAA
ATGAAAGGTGACTTTTTGACGATCAAAcaaaacattatcttaattaaatt
tttcaattcttaggATCTGGAAGACTTGCCCTTCAAGAAAGGTGACTTTT
TGACGATCATACGCAAGGAAGAAGACCAGTGGTGGCTTGCAAGGGATAAC
ACGGGACGCGAAGGAATGATCCCTGTTCCCTACGTCGAAGTTGTAAGTCT
TTTATTGCTGTTGTTTTTTAGATGCAGGTGTCTTATTTAGGCCCGGCGAA
CGGCGAATTTCGCCGGTTCAAAGCacgaaaaaattacaattttttcgcCG
CTCGAAAAGTTCGGTTTGTCGCCTCAAGTGcatatttacgctaatcaata
cactttGCTTGCTAAGAAATCgccggcctagaatctagaaatcgccagag
ttaatttttcatttgccaatctaccaaaaacaaagcaaaacccctgTAGA
TGACCTAATGGGCCGAACAGGACCgaaagataacttttttttgacatttt
agtgccGAACAAATGTCTTAAAGTGCTCGGAGTTTCAATGTTTAGAATGT
AGAATCCTTATTTCAGATTTGAGCTAATATTTTTCAACCTTGAGCTTTGT
TGCAAAACTCATGAGAGCTATATGATCTTCAAATTTATGACCAGTTGTTT
TTTACTCTCACCTTCATTTACAATGGCTAAAGCAATTTAGCTAAAACGTT
TTGTGGGTTACCTCCTCCTAAATGACACTGATCGTTCATTTAGACTTTAT
TTCCCTGTTCTGATCATTAAGCCATGAGCTATTCTTTACAAGAAATTACA
AATATGATGACACTTTGTCTTCAGGTCAACACTACTCCAACACCAACCAG
ATCACCATctgcaaaatcacaaaaaggaagtttcaagaaaatcaaCAATA
ATAATTATGCCAAACCAAAAGAGATTGCAGCTGCTCAACCACAAATACCA
GAGAATCACAATGGACCTATTTATGCTACTGCTCTCATCAATCGTGAACC
AAATGTTTACGATGAAAAATTATTAGGATTTAAAGTATGATTGATATTGT
TTTCAAGTATTTTACtaaattaaaaatgattttaatcttTAGTTTGGTTC
TGTTTTATGTGGATAGTACGTCATACACGTCCGTTGCTTTTTCTACAGTC
TGAACCCTGATTTCCAAAAACATGCTAACAAATTATTATCGTATTTTTAT
GCCTATCAATCAAGAGGAATTAACCTATTGTCAAATTCAGTttagctaga
atctgagaatgtcgtATGTCTGCAtgtcgccgtgtcaattcaagacagac
ttaaatccattttttcgaaaattgatttAAGACCATAATCCCCTATTTCA
GCATGCacgctttccaaaaacggccttaagtccacagaattctaatggga
aagaggtgtattttgcaattcaaaaaaaaaaagaatttagaatgttccat
aatatcaaccataaacagccttaagtcctaaattttagggaaaatttttt
ctatgaagcattgacatGAAATGTGTAGTCTTAAGTCCAATACATCTCAA
CCTTTAAAgccaattatctcaaaatggaatCTTGGAGACATCCAAAATTG
TCcgaattgattgaaatttttacaCTTGTTCTTTTGGTGgaggtattttt
tcattttttgaaaattcagatttGTGGGGTATGGGGATAAGGCTTTGGAG
TATTTCCATTTTAGGGTCTTTTAGTTTTCatatatcaaaaattttatgtc
gatgtttacaattgggcctacgagtaatttaaaagatactgaagttgagc
cagtgctgTTATCACGGTCGACAGTAATCTACAAACTCTATTTGCAATAA
TTATACCATTTTATATCTATTTTAGAAAGGGGACATCGtggaagttttaa
aaacaaatgacGATGGTTTATGGGAAGGAAGGCATACAGCTACACTTAAA
GTAGGATATTTCCCCTTCACACATGTCAAACTGAATCTAGAATAA Coding sequence (CDS) from alignment at sc0000256_pilon:320189..324533+ >XLOC_033662 ID=XLOC_033662|Name=XLOC_033662|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1818bp|location=Sequence derived from alignment at sc0000256_pilon:320189..324533+ (Clytia hemisphaerica_ch_hm2_pilon)
atgacatcTGCAATCCCTCGATCACCTTCAAGTGATGCATTGGTTGATGA
ACGATTGATGAAGTTTGgatgacatcTGCAATCCCTCGATCACCTTCAAG
TGATGCATTGGTTGATGAACGATTGATGAAGTTTGgatgGTATCATGGAG
TTGCGTCAAGGGATGATTCTATGAAACATCTTGATGGAAAATCACCAGGA
CTTTATCTCgtcagaaaaaggaaaggaACGACTGGAGAATATGTTTTATC
TGTCAGatgGTATCATGGAGTTGCGTCAAGGGATGATTCTATGAAACATC
TTGATGGAAAATCACCAGGACTTTATCTCgtcagaaaaaggaaaggaACG
ACTGGAGAATATGTTTTATCTGTCAGtGAAATTCAGAAAGTGTGTCATTA
CATTATCCAAGATGTCAATGGGATGTATTTCAAGATTGGCGAACAACGTT
TCGCTGACATTCCCTCAATCATTGAGTTCTATAAGAAGCATATGTTGGAC
ACCACGAACCTTATCGAACCTtGAAATTCAGAAAGTGTGTCATTACATTA
TCCAAGATGTCAATGGGATGTATTTCAAGATTGGCGAACAACGTTTCGCT
GACATTCCCTCAATCATTGAGTTCTATAAGAAGCATATGTTGGACACCAC
GAACCTTATCGAACCTGCATTGCGTCCAGGTGCAGCACTAGATCCCAAGT
TAGGATCATCTACAACAAACAACACTTCTTCGACCAGCAATGACATTGTC
AAAGTCAAAGCCAAGTTCAGTTTCCCTGGAAAGGCATTGCGTCCAGGTGC
AGCACTAGATCCCAAGTTAGGATCATCTACAACAAACAACACTTCTTCGA
CCAGCAATGACATTGTCAAAGTCAAAGCCAAGTTCAGTTTCCCTGGAAAG
gATCTGGAAGACTTGCCCTTCAAGAAAGGTGACTTTTTGACGATCATACG
CAAGGAAGAAGACCAGTGGTGGCTTGCAAGGGATAACACGGGACGCGAAG
GAATGATCCCTGTTCCCTACGTCGAAGTTgATCTGGAAGACTTGCCCTTC
AAGAAAGGTGACTTTTTGACGATCATACGCAAGGAAGAAGACCAGTGGTG
GCTTGCAAGGGATAACACGGGACGCGAAGGAATGATCCCTGTTCCCTACG
TCGAAGTTGTCAACACTACTCCAACACCAACCAGATCACCATctgcaaaa
tcacaaaaaggaagtttcaagaaaatcaaCAATAATAATTATGCCAAACC
AAAAGAGATTGCAGCTGCTCAACCACAAATACCAGAGAATCACAATGGAC
CTATTTATGCTACTGCTCTCATCAATCGTGAACCAAATGTTTACGATGAA
AAATTATTAGGATTTAAAGTCAACACTACTCCAACACCAACCAGATCACC
ATctgcaaaatcacaaaaaggaagtttcaagaaaatcaaCAATAATAATT
ATGCCAAACCAAAAGAGATTGCAGCTGCTCAACCACAAATACCAGAGAAT
CACAATGGACCTATTTATGCTACTGCTCTCATCAATCGTGAACCAAATGT
TTACGATGAAAAATTATTAGGATTTAAAAAAGGGGACATCGtggaagttt
taaaaacaaatgacGATGGTTTATGGGAAGGAAGGCATACAGCTACACTT
AAAGTAGGATATTTCCCCTTCACACATGTCAAACTGAATCTAGAATAAAA
AGGGGACATCGtggaagttttaaaaacaaatgacGATGGTTTATGGGAAG
GAAGGCATACAGCTACACTTAAAGTAGGATATTTCCCCTTCACACATGTC
AAACTGAATCTAGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000256_pilon | genome | sc0000256_pilon:320189..324533 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 790-909:4226 |
| Aaloc | 580-789:3175 |
| Aaloc | 451-579:2414 |
| Aaloc | 334-450:1655 |
| Aaloc | 190-333:1037 |
| Aaloc | 70-186:692 |
| Aaloc | 1-66:1 |
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