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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000256_pilon:483341..486395- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033645 ID=XLOC_033645|Name=XLOC_033645|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3055bp|location=Sequence derived from alignment at sc0000256_pilon:483341..486395- (Clytia hemisphaerica_ch_hm2_pilon)
GCAACATTTTATAACCTTTGCTTTCAGCTTGAAACAGCCAATCAAAATTT
GTTATCAGAAGAAAGCCAAGCAGACTGCCTTAAATCAGAAATGAACTTTT
TGAGGTAATACTTCATGCCATTTGTGGTCTAGGTTTGTTTTTAATGAAAT
CTGAATAATTTGGTTTTTACTTGTTTCTTTAAAAAAAAATATCTTGACAA
AGATAATTTTAGGTGATCCTAAACTAACTAACTGAGGTTTTGTAATTATT
GATTTTTATATCTTATGTTGACTTTTTAAAATAATGATTTATTTGATTTC
CTTCTCTTTATTTTTTAGACAAGAGAACACCAAGCTTGAAAGTTATCTTA
GTAGCTTACCCACATGTGAAGAGTTTGCTGAGATGAAAAAGGAGGTGTGT
TTTGGTTTTTCTCTTTTATTTTCAAAATTTTGATTTTTAAACATAGTAGT
TCATACTTTAAAACTTAAATTATTTTTTTCAGATAAAGGCTTTGAGAGAA
GAGCGAGACCAGCTTCTTACGCATAAAGAAAACATTTGTAGTAGTTACAA
AGATACCAAACGAGAACTTATTTTCAAGGTTAATTTCCAATTTATTAATG
ATTGTATTGATTCACTTGATTAACTTCCCACAAAAATGTCAGGCTCTTGT
CTTTTAAATGCAAAGTTTACTAAATACATGAAAATAAGGACTAGATCATT
GATAGAAAAATTCAAAATGTCTTTATCTTAAAGAGAAATTATGTGAATTT
TTTAGCAATCCCAACTAGACAAGGCAGGAAGGAAGATCAACGAACTTCAA
AATGAAGTGTCACAGTATGTAAATTTATTTTCTGAATTTTTTTTGTGAAA
ATTTGAGTTGTTATTTAGCAATTTCTTTGCTCTGATTTCTTCTTGTTTAT
AATTATACTACTTACAAGGTTACATCCTCACACCTAATAATATTATAAGC
TTCTTGTTGATTAATCTTTCAATCTTTCAAAAAACAATTGTCTTCTGACA
TAATATTGAGAATTCCCAAAAAGTTGTTATGGGCAAAATAATTGTTTTCT
CAAGACAGCTAGGTCTCTCTTGGCCTTCCATTTCGTTATGAAACCGCTGT
TCTGGTGCTTGGCTACACTGTTCTGGCTATATTTGAGGCTATTGCTTTCA
GCAGCTTTCAGCAAGAATTTCATATGTATGTTTGAATATGATACAAGAAG
ACCCCAAAATGAATGGATGAAGCTATTTGCTATCATTTAGTGCTCTTTTA
TTTATGCTAGGTTAAATCGGCATTTGGAGAAGTATGACAGACTGGGTCCC
ATATCCATAAGTGATTTTCAGAAACAACAGAATGATATGACAACATTACA
AGCAGAAAACACTGAACTGAAACAGGTTTTTTATGCTATTTGAAGCCTTG
AGATTTATAATAGATTATGGTGACTTTAGATATCTTTTCTTTCTTAAAAC
ATACTCATAAAAAACAATGTCCTTTTATCAGTAAAGTAAACATTTAGTCT
TTTTTCTAGAATCTGGCTAAAACTCAAAAGAAGTTGACACGTTTCCAGTA
TGAACTAGTTGCCAGAAAGAAAGAAAGTCAAAATGAAAAGCAAAAGCTAC
AGCATGATGTGGGATGTTTTCAAGATAAATTACAAGAAAAAAGTGCTTTC
ATCACGCAGGTTAAAAATTTTTAAACTGTACTGTACACTCCAATCTATCA
TCCTTCCTGCAGCTTCCTGTTCAATATTAAATCTTTCTCATATGAGATGT
TAAACCAGGATAAGAAGTACTATTGTTTTGCAATCTCATCCACCTTTTAC
TTTGATTTTTTTATAGATTCAAGCAAGAAATCAGGAACTTTTAAAAGAAA
AATTGATGGTAGAAGGGAAATTGAAAAAGGTAATAAAATATCAAATATTT
CTAGGACCTGTAAAATTAAGCGTATATTTCAGCTTGTTTACACCAACAGT
GTCTCTCTGGGGTTAGGTGGTTACTGCATTTTAACATGCAAAATGATATA
TTTCTACTCCAGCAGAACTTCGAAAATCTTTTGGAAATTTTATTGTCACA
TAAATAACCTAACCTTATCTTTTTACAGCTAGAAGATAAATATACTGACG
AGATGGAGCAAACCCTATGTTCTGTATTTTCTGCTGTAAGCTGTTTTTTA
TTGTATTATTAAATTTAATGTAAATTTTTATGAAAGCTTGGGTTTTTTCT
TTATGCTGTTGAATGACTGGTATAACAGTCTCCAAGACATGTTTCATCAA
CTTGGTCTTACCAGATAACGTTGAACCAACAATTAATGTTATTTTATTTG
ACTATAATATTTCGAACTGGCCTATCTTCAGGTCTAAAAATAGTTAAATT
AAAATCCAGTTTTATGTTTGATTATTTCGTCTTAGATAGTAAGAATGTGC
AGCCAAACATAACACAGTTTGAAAACAAAGTTTGCCAAGGCAATATAAAT
TCTTTGATATTTTTTAGACATTGAGTTGTTTTGACGAGGTTAAAAACTTT
GTAACACTTTGCCAGAAGATGTCATTGGGTGAAGAACCAGATATCCAACT
TTTGCTCGGTCTAAGAGGTATCAATTTTTACTTTGATATCTTTTGTGAAG
TCTTAATAACATTGTTGTGGAGCAAATTATCCATCCACTATTTTTGTCCA
TCCTACTGAATCTATTGTTAAATCAAGGATCCTTGTGTTAAGGTAGGTTA
TACTCTGTTACAGTGTGCAAAGTTGGAATCACAGGTGAAAGAGTGGATTT
CTCTAGCACCTCTAGGGAGATATGTGGGATAAACTTTGGAGAAATTTTGG
ATTCCTTACTTTAAAAAGATTTTTATCAGTGGTATTAGTTTTACTTTTTC
ATTTTCATGTTTAATTTCTTTGAATTTTCATTTAGATTCACCAAGGGAAG
AACAAAAGAAAGCCAAATCTGATCTTAATATCAAAGAGTTAAAAGAAAGA
CTTGAAAAGATATCACAAATCAAGAATGATTTAGACGGATTGAGGTCAAT
GATTGCTGAAAGGCATGCAGAAGAGATTGGGAAAAATATGTGTATTACTC
AATAA Coding sequence (CDS) from alignment at sc0000256_pilon:483341..486395- >XLOC_033645 ID=XLOC_033645|Name=XLOC_033645|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1980bp|location=Sequence derived from alignment at sc0000256_pilon:483341..486395- (Clytia hemisphaerica_ch_hm2_pilon)
GCAACATTTTATAACCTTTGCTTTCAGCTTGAAACAGCCAATCAAAATTT
GTTATCAGAAGAAAGCCAAGCAGACTGCCTTAAATCAGAAATGAACTTTT
TGAGGCAACATTTTATAACCTTTGCTTTCAGCTTGAAACAGCCAATCAAA
ATTTGTTATCAGAAGAAAGCCAAGCAGACTGCCTTAAATCAGAAATGAAC
TTTTTGAGACAAGAGAACACCAAGCTTGAAAGTTATCTTAGTAGCTTACC
CACATGTGAAGAGTTTGCTGAGATGAAAAAGGAGACAAGAGAACACCAAG
CTTGAAAGTTATCTTAGTAGCTTACCCACATGTGAAGAGTTTGCTGAGAT
GAAAAAGGAGATAAAGGCTTTGAGAGAAGAGCGAGACCAGCTTCTTACGC
ATAAAGAAAACATTTGTAGTAGTTACAAAGATACCAAACGAGAACTTATT
TTCAAGATAAAGGCTTTGAGAGAAGAGCGAGACCAGCTTCTTACGCATAA
AGAAAACATTTGTAGTAGTTACAAAGATACCAAACGAGAACTTATTTTCA
AGCAATCCCAACTAGACAAGGCAGGAAGGAAGATCAACGAACTTCAAAAT
GAAGTGTCACACAATCCCAACTAGACAAGGCAGGAAGGAAGATCAACGAA
CTTCAAAATGAAGTGTCACAGTTAAATCGGCATTTGGAGAAGTATGACAG
ACTGGGTCCCATATCCATAAGTGATTTTCAGAAACAACAGAATGATATGA
CAACATTACAAGCAGAAAACACTGAACTGAAACAGGTTAAATCGGCATTT
GGAGAAGTATGACAGACTGGGTCCCATATCCATAAGTGATTTTCAGAAAC
AACAGAATGATATGACAACATTACAAGCAGAAAACACTGAACTGAAACAG
AATCTGGCTAAAACTCAAAAGAAGTTGACACGTTTCCAGTATGAACTAGT
TGCCAGAAAGAAAGAAAGTCAAAATGAAAAGCAAAAGCTACAGCATGATG
TGGGATGTTTTCAAGATAAATTACAAGAAAAAAGTGCTTTCATCACGCAG
AATCTGGCTAAAACTCAAAAGAAGTTGACACGTTTCCAGTATGAACTAGT
TGCCAGAAAGAAAGAAAGTCAAAATGAAAAGCAAAAGCTACAGCATGATG
TGGGATGTTTTCAAGATAAATTACAAGAAAAAAGTGCTTTCATCACGCAG
ATTCAAGCAAGAAATCAGGAACTTTTAAAAGAAAAATTGATGGTAGAAGG
GAAATTGAAAAAGATTCAAGCAAGAAATCAGGAACTTTTAAAAGAAAAAT
TGATGGTAGAAGGGAAATTGAAAAAGCTAGAAGATAAATATACTGACGAG
ATGGAGCAAACCCTATGTTCTGTATTTTCTGCTCTAGAAGATAAATATAC
TGACGAGATGGAGCAAACCCTATGTTCTGTATTTTCTGCTACATTGAGTT
GTTTTGACGAGGTTAAAAACTTTGTAACACTTTGCCAGAAGATGTCATTG
GGTGAAGAACCAGATATCCAACTTTTGCTCGGTCTAAGAGACATTGAGTT
GTTTTGACGAGGTTAAAAACTTTGTAACACTTTGCCAGAAGATGTCATTG
GGTGAAGAACCAGATATCCAACTTTTGCTCGGTCTAAGAGATTCACCAAG
GGAAGAACAAAAGAAAGCCAAATCTGATCTTAATATCAAAGAGTTAAAAG
AAAGACTTGAAAAGATATCACAAATCAAGAATGATTTAGACGGATTGAGG
TCAATGATTGCTGAAAGGCATGCAGAAGAGATTGGGAAAAATATGTGTAT
TACTCAATAAATTCACCAAGGGAAGAACAAAAGAAAGCCAAATCTGATCT
TAATATCAAAGAGTTAAAAGAAAGACTTGAAAAGATATCACAAATCAAGA
ATGATTTAGACGGATTGAGGTCAATGATTGCTGAAAGGCATGCAGAAGAG
ATTGGGAAAAATATGTGTATTACTCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000256_pilon | genome | sc0000256_pilon:483341..486395 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 823-990:169 |
| Aaloc | 721-819:589 |
| Aaloc | 664-720:978 |
| Aaloc | 601-663:1240 |
| Aaloc | 451-600:1547 |
| Aaloc | 337-450:1795 |
| Aaloc | 277-333:2301 |
| Aaloc | 181-276:2574 |
| Aaloc | 106-180:2737 |
| Aaloc | 1-102:3056 |
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