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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:3135559..3139565+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033599 ID=XLOC_033599|Name=XLOC_033599|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4007bp|location=Sequence derived from alignment at sc0000001_pilon:3135559..3139565+ (Clytia hemisphaerica_ch_hm2_pilon)
agTTATGAAAGCTGTATCGCCATCGACAGCTCAACTGAAACTGAAGGTGA
AGTTGGAGACGAGTTGCAAGCTGGCAAAGTGAACGACGTGAGCTTTTCCA
GTGAGGAGTCCGATGCAGAGTCCGATTTGGGTGGAGATTATCTTAATGGC
ACTGGTGGAAACGTTCCTTTGTTTCCTCAAAAGTACGCATCGCCAAAAGA
TGGACTCTCAATCAAACCGTATGTATTAATATCATATGTTTAAGTGTTAC
AATTGGAGAGCTATAATCATCGAAGAGCACTTCATTTTAATCCTTcttga
atgaaatttgaatttggtctgtttcttttttttacattaaaaTCCAAACT
TCGAAtcttcaaatattattttaatatAAAATTCATTCTTCTAAGTATAA
ATTTGACCAGGGATATTTCAATATTGCATTATTTTTCATACAGGGATGGT
ACTTCAAATTCCAAACAGACACCTGGTGcttcaaatttaatttctaaGCT
GAATTCATCGAATCCTGATGCGAGGTGaataatattataataattGAGTC
CAAATTTAATTCataataccttattacacaaatattactagtcattttat
taacgcgaactgaaaaattttgtgttaattttttgcgtgttaatttcaag
gccgttgaatagttgcctagtaatattcgtgtaataaggtagtaatagta
gaaataaaattatgaaaatattttaaaagcatATAGATTTCAGTACAATT
CTAACAATTGTATTATTGGTGTTCTTGGTAATTAGATATTGGTATCAAGG
CTGTACACATCCCCTAAAAGATTTTGGATATAATTTTTGGCCTATATCGT
AGGCTTTAGtagatttataaaataattttgttaaatttacgTTTGTTTTA
GGCATCAACAAAAGTCGATTCAACTTTCATCTCCGAACTCATTGAACGAA
TCTTCACCGGTTTTGTAAGTTGACTAAACTATTTCGTCGTAATGTCAGGG
CTCTGTccatacacacttttttaataagaatagtgtactttggctgatgT
TGTGcattaatcttttttttctattgttctaaacagtAGTACTTTTCCTA
CATTTTTTACCCACCATAGTCGGAGCCCTTaatacttttgaattttgaac
tcATTTAATTTGGACTGCAGTTGTGATTTAGTGATGATAAAAAAGTGATA
CCCTTTGATACCATTTGATACCCATTTTGACGTTTATGATGACTTCGAAC
CTCCATATATCGATAAGATATCAGGAATAAAAAAGTGATGGTTTAATATT
TAAGACAGAGTACACcctttttaagatgaaaaaacaaattataccGTGTG
TATTTTTGGATACAAATCTTTATACTTATACTAAATCTTTTCAGACCGAA
CTATCTTGGTGGAACTCCTAAAGCCGTCAAAAGATCTGCATCAAGGTAAT
TTCTGAATAAATAGTCATTGAGGTACTCCAAAAGCATGAGGATTTATGAT
TcacattttgtcttttttaacaGAAGCAATGTTTTAGCACTTAAaggtca
taacttttgatgtagttaaccaaatttgataaattacCCCTCAAAATATA
TTCCAATAGATTAATTTATTATTTGGTTCTTCAGCTATTCCTTCAATAGT
ATTCGTTTTATTTATTAGAAGACAAGAAGAAGAGGAGAGCTTGGAACTTA
TTGATGCGGCGAAGATTATGGGTCAGTTTATGTTAGTTTTGTGTACTCCT
AGCGAAGTCCTGATATACAGTTTTCTTTGTAAAGCTAATGTGATATTATA
GGAgtcagaaatttttattttagtaataAACTAAATTTTAAGACATCTCT
GTCAGGAAATTAAGCATTAAAAACGTTTGTCAGGGACCGATGGTTTAGTC
TTGAAGATGCTCTTTCTGTAAACAGTTTTTATGAAATGTGTtgactttta
taagaacattcacgAGCCTTAAATTTGGCGAAGAAACTAAGAACAAGCTC
AGCCTCGGAATTTTCTGAGAACATTTAAAAGCAACCtttttttGGCACTG
TTAATACAGAAAGGCATGTTTTCCAGAATATTTTACtctttttcagcaaa
aagcTTGTTTagaagattttcaaggtttttttgaagatagAAGTTTTGCT
TTGGAAATAATGAAGGTTGCAAAGTACTGTCAAAAAGAACATTAAGAACA
GCTGAATAacatgaagccttaaaattcccaaaacttaagaacaatTGAGC
CTTagtcaaaatttactggttcttttaaaaagtgaTTGTAGTTCATCAGT
TTAGGCCTTTGAATTTTATCAATGCATTGCTTAAAAAGCTAACTGCTGTC
TTTTCTATCTTCAGAACAATTTAAAATGTTGTACGATCGGCAAAACAAGA
TCATGACAGAAATTGTGAAATTAAGAGCACACATCGACAACAAGATGGCA
TCTCTTCCCATCGAAGACGATCAATTCCAGCTTCCAGAAGTAAACAGCCA
ACAAGAAATGGATACCTTGGAAGAAAATCTAAATGATCCTGATTTCTTAG
CAAAGTTTGTAAGTATGATTAATTCAGTTGATTTCAATTTAGCTGTCAGA
AAAAAcgaaattcaaatccccagccataaaaaatatgggaatatcgatcc
ccattgagttttggtccgttactttctcacagacccggtgggattttatt
aGCTAGTGGAGTAGCtaataaaatcccaccgggtctgtgagaagggggta
tctGATTGACACCAAAAAACAGCGAACAAACAAACATCCTGTTTCATCAT
AGTAATTTATCTGAAGACTTTGTGTCCATATCTTTGCACTAGATGCTTTT
GAACGTTTTTTCACAGTGATTATGCTCTGAAATTGAAGAATTGCCTCTTT
GAAAATGGTGATAATATCTcagtaaatttttcttttttcttatctatatc
ttcattttgaaagattttttcaactttctttttgataatatcCACTTCCG
GGTTAACTTTTCAACCGGCACCTGCATCTCTATCAAATTGAAGGTGAAAT
TAAATTCGATctctttttatagaaatctcGTATCGCACGAATTGGCGGGG
TTGAATATGGTGATGCTACAATTCTAGTGATGGAAAAGTAAGTAGTGATA
AAAGAGATCCTTCGGTCTTCTAGATATTTAAATTTCTAATAACAAAGATC
TTTCAATACTGAAAACGATAGTGCTTCAAATCTTGAGATGGTGATTTTCA
GTTCATAGTTCTGAATGTTTTCTGACTACTGGTTTTGTACGTCCGATGTT
TATTATGCATGGTTCTTCAACGAGGCGAAGGAAAACAATGCTCCATTTAA
ttgcaacattttttaaataaaaagacttttccttatttgtttttttcgaa
CGTGCATAGCAATTCCTTTAAATTAAAGTTGACTAAACAAAGACCAAGTT
TTTTCCCAAATGGGGTAGATCCCAGTGGGTcacagaggcaggggtgttgt
gTTACATCGTTCTCTTTAAGAAATCACAATTCAAAATACATAgatcattt
tcaaaactttttttctttagattttttacaAGAGCTTTCTTAAGCACGTG
TAACATGGAAGGAAACAACGGGAAGTTTGCCTTCAAGAAATCCAAGGCTT
ATTCTGCAATTAGTGGTAATTTGTttctactttttaaaatttagtaACTG
GTTGATTCTAatgaataatcaaataaaaaagaagactGTTTCTTACAATC
AATCAAGCCCAATCTAGTGTACCAAATATCTATCCTACGAAGAAGATTTT
AATGATCTCAATAGGTTTCTCAGATTAAGAAAGTAAGGTTTTTGCCAACA
AATCTCTCTCTCTAAAGATTTTActattattttatttctttcaatAGATG
TTCTAGTGAAAAAGTATGGCACAACGGAAGACAATGTTGGGAAGAAAGTT
GCCAACAAATTACGAAACGCCCCTGGACAGAAAGGTGGACTTGGCAGAAA
GAAGTAG Coding sequence (CDS) from alignment at sc0000001_pilon:3135559..3139565+ >XLOC_033599 ID=XLOC_033599|Name=XLOC_033599|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1860bp|location=Sequence derived from alignment at sc0000001_pilon:3135559..3139565+ (Clytia hemisphaerica_ch_hm2_pilon)
agTTATGAAAGCTGTATCGCCATCGACAGCTCAACTGAAACTGAAGGTGA
AGTTGGAGACGAGTTGCAAGCTGGCAAAGTGAACGACGTGAGCTTTTCCA
GTGAGGAGTCCGATGCAGAGTCCGATTTGGGTGGAGATTATCTTAATGGC
ACTGGTGGAAACGTTCCTTTGTTTCCTCAAAAGTACGCATCGCCAAAAGA
TGGACTCTCAATCAAACCagTTATGAAAGCTGTATCGCCATCGACAGCTC
AACTGAAACTGAAGGTGAAGTTGGAGACGAGTTGCAAGCTGGCAAAGTGA
ACGACGTGAGCTTTTCCAGTGAGGAGTCCGATGCAGAGTCCGATTTGGGT
GGAGATTATCTTAATGGCACTGGTGGAAACGTTCCTTTGTTTCCTCAAAA
GTACGCATCGCCAAAAGATGGACTCTCAATCAAACCGGATGGTACTTCAA
ATTCCAAACAGACACCTGGTGcttcaaatttaatttctaaGCTGAATTCA
TCGAATCCTGATGCGAGGGATGGTACTTCAAATTCCAAACAGACACCTGG
TGcttcaaatttaatttctaaGCTGAATTCATCGAATCCTGATGCGAGGC
ATCAACAAAAGTCGATTCAACTTTCATCTCCGAACTCATTGAACGAATCT
TCACCGGTTTTGCATCAACAAAAGTCGATTCAACTTTCATCTCCGAACTC
ATTGAACGAATCTTCACCGGTTTTACCGAACTATCTTGGTGGAACTCCTA
AAGCCGTCAAAAGATCTGCATCAAGACCGAACTATCTTGGTGGAACTCCT
AAAGCCGTCAAAAGATCTGCATCAAGAAGACAAGAAGAAGAGGAGAGCTT
GGAACTTATTGATGCGGCGAAGATTATGGAAGACAAGAAGAAGAGGAGAG
CTTGGAACTTATTGATGCGGCGAAGATTATGGAACAATTTAAAATGTTGT
ACGATCGGCAAAACAAGATCATGACAGAAATTGTGAAATTAAGAGCACAC
ATCGACAACAAGATGGCATCTCTTCCCATCGAAGACGATCAATTCCAGCT
TCCAGAAGTAAACAGCCAACAAGAAATGGATACCTTGGAAGAAAATCTAA
ATGATCCTGATTTCTTAGCAAAGTTTAACAATTTAAAATGTTGTACGATC
GGCAAAACAAGATCATGACAGAAATTGTGAAATTAAGAGCACACATCGAC
AACAAGATGGCATCTCTTCCCATCGAAGACGATCAATTCCAGCTTCCAGA
AGTAAACAGCCAACAAGAAATGGATACCTTGGAAGAAAATCTAAATGATC
CTGATTTCTTAGCAAAGTTTaaatctcGTATCGCACGAATTGGCGGGGTT
GAATATGGTGATGCTACAATTCTAGTGATGGAAAAaaatctcGTATCGCA
CGAATTGGCGGGGTTGAATATGGTGATGCTACAATTCTAGTGATGGAAAA
attttttacaAGAGCTTTCTTAAGCACGTGTAACATGGAAGGAAACAACG
GGAAGTTTGCCTTCAAGAAATCCAAGGCTTATTCTGCAATTAGTGatttt
ttacaAGAGCTTTCTTAAGCACGTGTAACATGGAAGGAAACAACGGGAAG
TTTGCCTTCAAGAAATCCAAGGCTTATTCTGCAATTAGTGATGTTCTAGT
GAAAAAGTATGGCACAACGGAAGACAATGTTGGGAAGAAAGTTGCCAACA
AATTACGAAACGCCCCTGGACAGAAAGGTGGACTTGGCAGAAAGAAGTAG
ATGTTCTAGTGAAAAAGTATGGCACAACGGAAGACAATGTTGGGAAGAAA
GTTGCCAACAAATTACGAAACGCCCCTGGACAGAAAGGTGGACTTGGCAG
AAAGAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:3135559..3139565 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 823-930:3900 |
| Aaloc | 727-819:3572 |
| Aaloc | 661-723:3073 |
| Aaloc | 469-660:2367 |
| Aaloc | 415-465:1670 |
| Aaloc | 364-411:1396 |
| Aaloc | 301-360:903 |
| Aaloc | 220-297:445 |
| Aaloc | 1-216:1 |
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