|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:312444..315452+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033597 ID=XLOC_033597|Name=XLOC_033597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3009bp|location=Sequence derived from alignment at sc0000063_pilon:312444..315452+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTAAAGCCTGGCAAACCGGAGATAACAGTGTccgaaattataaaaaata
tttcaaacccgTTATGACATATGCTGAAGGTGAGTGAAATCTTTCTTCCT
Acgcagctggcacacaacgttgtttcaacgttcattgaacgttagataaa
cgttgaaacaacgttgtgtgccagctggcaGTCGATATAAGTGGGAAACG
TTAGAAAATAGGAGccatggccaagtggtcaaaggtgTCAGCATCCAAAA
CCAGGGGCTTGTGGTTCGAATctccgctccttccaatgttcatagatagc
cgagctgGGCGGCCGtagaccccgtgaaaacaatcaaaagactgcctaaa
agtcctagattactgggctatccacgtaaaatatcgactctatgcTGAAA
GGTGAGAAAGATTATGTGTATACTTATGCGTCACATGCTCAAAACGGTgt
gaacacccccttctcacagacccacttggaGCCCTTCCcattgaaaaaat
tggccaaaatattgtccccagtggaaaattacactctgaaaataatcaaa
taaaccaattctcactgcaaaatgATGACCtgttttttccatccccactg
aattttttgaatagAAAACAATGTAGTTCAAATCCTCAGCAATAAAATAC
ATGGGGATATCAATTCCCatcattatttttatccccactgtctAATAAAA
TCCCTCTGGGTCTGTGTAAAGGGGTTGTGTAGGAAAGCGTTGTCGTTCAG
ACGGTCTCAAACAGGTAACACAAACAGATAGCACTgtcaaaaaaaatact
tttgttaGTAACATGATTTCATGATCACATgatattgacaattttttagG
GCACAGTTTGAcgctttttatttcaattttccaggggaattgaattttca
tcgaataacgAATCGTATCGAATAGTAGCATGTCGAATAGTAGATCCTTC
TCTGTGTCTTAAACCATACTGTGATTTAGTTATGGAAACCCTCTACATTA
TTCAAAGCTCACCTCATATCAATTCATTTTAAGGTGCATGGACTCTTGGT
AAGAAAGACGGATCCATCGATGAACCTTTCTCAAGTGATCGTCATCATAT
TGATGCTAAATCATGGTTGGACCTACAGGATAAGGtgaaaagttttcttc
atttttggatatgatATTTTACTTAAAAGGCTTTAATCTTCTCCTCAATC
TCAATCAAAAATCTTATGCTAGAGTCTTATTTCATTATGATAGTCATTTA
GATTCTAAAATTTCTAATCTATAATGATGGCTGACTAAATTCTAATTTCA
AACGCTAATGATTGGCTTGGAGACGCCATAAAACtcttaaataaaaataa
gtggCTCTCTCATTATAAGGAGTAATATAGCAGGGCCATGGATCAGTAAG
CAATGACGTTTGTAAGACCATGAAATAAACGCGGTAAGGCAAAAAATTTG
TAATACCATAGAAGATCAGCTGGCTTCTTACGCTTTGCCTTTTTGGTATA
CAGATTATAAAAGACGTGTGACATTCTATAGAATAGCATTGGGCAAAATC
ACAAATATCCAATTTGGGAAATGTAGTATAAATAAGATTTCCGTAAAGTT
TAAGTCGAACTTGTGTATTTCTAAAATCAAAGGAAATATCTTATTTCTAC
TATATTCCCCACTTTGGTAATCGATGATTTTACCCGATTTAAAGTCCATT
ATCAGGCTCATTACTTTTATCAATTAACTTTTGTTAAATAGGTTCGATAC
AATGCTTACTCCGGATCAAAAAGTCTTCTTGAGAACTTGGCGCATCTCCC
AACAAAGATCACACGATTTGAAGAAGGAGACCCTGTACTTGCCCAATGGA
ATTACAGAATCTCTGTCCATCCAATCGAAGGAGACATTTCAATCGATATG
TTGGAAGTCCGATACGATGAAGCCTCACAACGTAAAAGTCGACGGAACCG
AGAACAATATCTCCACTCACGATCTGCTCGATTCGATTTCGAAGGTATTG
ATTAATCTTACCCTTGTTTTCAGCTGGCAAACGAAGTTGTTTCAACGTGT
ATCTAATGTTCatacaacgtccatataacgttatatgaatgTCGAAACAA
CATTACATGCCAGCTAGACTGTTTGGTTTTCGTAATGGAAATAAGTATGC
TTATTTAGTACAGCCACCAGGAGGAATAATTGGCGTTAGACTTGACATTT
ACATAAACACGGAAACAATTGTTTCTGTTATCTTTAGGGTATCCACACTT
TGTCATTTCccaatttaaaaatgttttgatttattatttaaaggGATCAA
TATTAATGGAACACGAGAAGCAGGAGCTATGGATTATAATTTGTTGGATT
CCATTATGGAGCAAATCCCTGGTAAAGATAACTACAAAGCTGATATCACT
GAAAAAGCATTTGATGCATCTGGTGATGATCTTTTCTCAGCTAACCCCAA
AACACCTAACAAACCTTTGAACCTTGGATACTACCATCGTGCTTTTATTC
AAAAATCAGCTGACGGAACCAGAAGACAAGACCAAAGAACTTTCTCTGAT
CGTGTTTTCGTTGCTCATACAACTCAAGGACGTATTGCACCTCAAGTCTA
TGAAAACAGCTACGGAGAAAAGATCGAGCGCCGTGTCTCGTTCGCTATTC
CAGTAGAAATCATTTGGCTAACTCCACTTCACAGCTGGAACCCATATAAC
ATCCCAATGCTTGAAAAACCAGATGGTAAAGGCACAGATTCAATGCCGTA
CTCTGGAATAAGTAGCCGTATCTACTACATGACACCAACTGAGTTCTTCA
GCGGAGATTCAGAAGAGGCTGATGCTGCAGATACCGTTGCAGGAGAGGTG
TTCGTTAATACACCGAACCATGGTAAAAAGAAAGTCCAATCGTCCGGCAC
TCGAATCGTTTTCCCGAAGATAGCCGGCATCGAAAACACGGTACGTCAAC
GTTACCCGATCATGCCGGTACACGGTGAAGGAAGCGCCCTTTTCAAGAAG
TTGAACGCC Coding sequence (CDS) from alignment at sc0000063_pilon:312444..315452+ >XLOC_033597 ID=XLOC_033597|Name=XLOC_033597|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2298bp|location=Sequence derived from alignment at sc0000063_pilon:312444..315452+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTAAAGCCTGGCAAACCGGAGATAACAGTGTccgaaattataaaaaata
tttcaaacccgTTATGACATATGCTGAAGTTTAAAGCCTGGCAAACCGGA
GATAACAGTGTccgaaattataaaaaatatttcaaacccgTTATGACATA
TGCTGAAGGTGCATGGACTCTTGGTAAGAAAGACGGATCCATCGATGAAC
CTTTCTCAAGTGATCGTCATCATATTGATGCTAAATCATGGTTGGACCTA
CAGGATAAGGTGCATGGACTCTTGGTAAGAAAGACGGATCCATCGATGAA
CCTTTCTCAAGTGATCGTCATCATATTGATGCTAAATCATGGTTGGACCT
ACAGGATAAGGTTCGATACAATGCTTACTCCGGATCAAAAAGTCTTCTTG
AGAACTTGGCGCATCTCCCAACAAAGATCACACGATTTGAAGAAGGAGAC
CCTGTACTTGCCCAATGGAATTACAGAATCTCTGTCCATCCAATCGAAGG
AGACATTTCAATCGATATGTTGGAAGTCCGATACGATGAAGCCTCACAAC
GTAAAAGTCGACGGAACCGAGAACAATATCTCCACTCACGATCTGCTCGA
TTCGATTTCGAAGGTTCGATACAATGCTTACTCCGGATCAAAAAGTCTTC
TTGAGAACTTGGCGCATCTCCCAACAAAGATCACACGATTTGAAGAAGGA
GACCCTGTACTTGCCCAATGGAATTACAGAATCTCTGTCCATCCAATCGA
AGGAGACATTTCAATCGATATGTTGGAAGTCCGATACGATGAAGCCTCAC
AACGTAAAAGTCGACGGAACCGAGAACAATATCTCCACTCACGATCTGCT
CGATTCGATTTCGAAGgGATCAATATTAATGGAACACGAGAAGCAGGAGC
TATGGATTATAATTTGTTGGATTCCATTATGGAGCAAATCCCTGGTAAAG
ATAACTACAAAGCTGATATCACTGAAAAAGCATTTGATGCATCTGGTGAT
GATCTTTTCTCAGCTAACCCCAAAACACCTAACAAACCTTTGAACCTTGG
ATACTACCATCGTGCTTTTATTCAAAAATCAGCTGACGGAACCAGAAGAC
AAGACCAAAGAACTTTCTCTGATCGTGTTTTCGTTGCTCATACAACTCAA
GGACGTATTGCACCTCAAGTCTATGAAAACAGCTACGGAGAAAAGATCGA
GCGCCGTGTCTCGTTCGCTATTCCAGTAGAAATCATTTGGCTAACTCCAC
TTCACAGCTGGAACCCATATAACATCCCAATGCTTGAAAAACCAGATGGT
AAAGGCACAGATTCAATGCCGTACTCTGGAATAAGTAGCCGTATCTACTA
CATGACACCAACTGAGTTCTTCAGCGGAGATTCAGAAGAGGCTGATGCTG
CAGATACCGTTGCAGGAGAGGTGTTCGTTAATACACCGAACCATGGTAAA
AAGAAAGTCCAATCGTCCGGCACTCGAATCGTTTTCCCGAAGATAGCCGG
CATCGAAAACACGGTACGTCAACGTTACCCGATCATGCCGGTACACGGTG
AAGGAAGCGCCCTTTTCAAGAAGTTGAACGCCgGATCAATATTAATGGAA
CACGAGAAGCAGGAGCTATGGATTATAATTTGTTGGATTCCATTATGGAG
CAAATCCCTGGTAAAGATAACTACAAAGCTGATATCACTGAAAAAGCATT
TGATGCATCTGGTGATGATCTTTTCTCAGCTAACCCCAAAACACCTAACA
AACCTTTGAACCTTGGATACTACCATCGTGCTTTTATTCAAAAATCAGCT
GACGGAACCAGAAGACAAGACCAAAGAACTTTCTCTGATCGTGTTTTCGT
TGCTCATACAACTCAAGGACGTATTGCACCTCAAGTCTATGAAAACAGCT
ACGGAGAAAAGATCGAGCGCCGTGTCTCGTTCGCTATTCCAGTAGAAATC
ATTTGGCTAACTCCACTTCACAGCTGGAACCCATATAACATCCCAATGCT
TGAAAAACCAGATGGTAAAGGCACAGATTCAATGCCGTACTCTGGAATAA
GTAGCCGTATCTACTACATGACACCAACTGAGTTCTTCAGCGGAGATTCA
GAAGAGGCTGATGCTGCAGATACCGTTGCAGGAGAGGTGTTCGTTAATAC
ACCGAACCATGGTAAAAAGAAAGTCCAATCGTCCGGCACTCGAATCGTTT
TCCCGAAGATAGCCGGCATCGAAAACACGGTACGTCAACGTTACCCGATC
ATGCCGGTACACGGTGAAGGAAGCGCCCTTTTCAAGAAGTTGAACGCC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:312444..315452 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1483-2196:2296 |
| Aaloc | 1228-1479:1742 |
| Aaloc | 1129-1227:1036 |
| Aaloc | 1048-1125:1 |
|
