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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:213596..219282+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033593 ID=XLOC_033593|Name=XLOC_033593|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5687bp|location=Sequence derived from alignment at sc0000063_pilon:213596..219282+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAATAGTCATCAGACAACAACAACAGCCTACCATAATGCCTGCTTC
TTCTGAAGAAAGCATTTATGCCGCCCAACAAGTACCGCCACCACCTCCAT
TACCCTCAAACGTTGGTGGTACGCCTAGAGGTGGAAGTTTTGAGAGTGAA
CGACGCCCATCCTTACCGCCAAAGGTTTGTCCCGTTCAACTTCTTTTTAG
CTTAAATCAATCTTCTAAaaccttaaagggacataacagtacttgcgaaa
tttgtaaacaaactgtatgcagcggatacaaaatcaaaacaaatgtcaca
tgtcaaaatagaaaatcaaaccaaatatggcaaattttgattgttcaatt
gttttacaagtttgttttggacacatgattttaattgttctccttaatga
cacgtggttcgtgtTCATGTTTACATTtgactacttttatgtccctttta
ATCTCTATTTTTTGCAACAGCATAAGCCACATGGCTAGATGCTGTGCTTT
ATCTTCCAAGCAAAAACCCTGGTGAAAACAGCTCACTGTGGCTCTGCTCA
TTAAAAATTAACTGTGCGTGTGTTCAGTGGCACATCATGTTTTATTGATT
GAACCATAGTGATTTTTCTTACGAAATCACCGAACGTTATTGGTTGAAAT
ATACACAACACAACTTTTTTGTGGCAAAGAATACAGCTCTGTTCTACTTA
AAACTTACCTTCCAAATTCTTTATCCAGATACTATCCTTAGTACGATTCT
TGATGAAACTATCGAAAAGGCTCAGGTACCACTAGCCACGGGCCCACTTT
AAAGCTTTTATCTTATAGACATAATGGGGTGATTTTTAACTCTATATAGC
ATTTTTGCTTCGCATTTGGGctttttttgtttgtctttAAAAGTTGTGAA
CCTCGTCAAATTCTCATTGTTTACTTTCACTGGGCCCATTTTTGGAAAAG
TAATGTTTAGTCAGAACAAGACTTGAGGCACTGCAATAAAATCACTATCA
CGATAAACTAGACTGGAGtagtttataatgcgtgtaatcttataggcgtt
atatgataatacgattattgttacgagATTTAGTTTGTATACACTAAGAT
TGTTTCCTCCATttactttttgatttatttctactatgtctgaattagtc
gtctagcttgttAGACACGATaaaaaaaCTCTTAAACTTTTTTAGAACTA
CCAACACCTTGAACAGATCTACGCCAACGTTCCACCACAGATGATGCAGa
tgaacaaacaaaaacaattatcCAATATAAACAGTGGCTCCAATCTTATT
CAAGCTGAACACCAATCGCCATACAGAGGAAGCCCAGGTCAGTGTCGAAG
TCTATTACGGGATTTACACGGGGAAATAAACGCAGATTTTACACCATTAT
GACTGTACATGGTTCTTACAAGAACACAAGaatcaaattttgtcaatttt
caaagaaacatgTGAGCCCCAtgaattttgttcaatttttttcttcattt
ggaAATTTTAATCTTCCTTTTTCCATCCTTAATATAATGTGAGAATTTTT
GgacttttcttaaaattcgaCATTATCACTTTTTCTCGCTCATTTAAGAA
AATACTTATCGCAAGATTAATTTTTGATAgtcttcttttaaaattttaac
aatCTCGAGGCTCACTTCGATTTTTATAATTCTTATTCTaaaaaaaGAAC
TGCGTACACGGAAAAATGAGCACCACATAGAGcttgaaacaaacaaacaa
acaaacaaatcaaaaaaagggTAATTAAACTGATATGCACTGAAAGAAAC
AATAGCGAACAGGGGAGATGctaaaatggtaaaaagtttttcttttcttt
ctttagatGTTAACAGTCAACGAGAAACTTTTAAATCAACATACATACAA
CCAACCAATCTTGGTGCAACATACACACAATCAACTAATCAGGGCACACC
TCTTAGTCAACGAGCCAATCAAAACACACCAATTTCTCAACCAGCCAATC
AAAACACACCACACGTCCAAGTTCAtttctttcataaaaataatcaaaaa
gcaCGTGCAGAAGAATACCAGAGATTTTTGATGTCTAAAATCAACGTTGC
AAGATATACAGGTTAGTGTGCATACGTTCTATATGAGACTGTTCGTGtaa
cgtttccagaccatctaaaaagaacgacaaataacttttaaaaaaaacaa
aaagaacgacaagccctaaccctaacaatcaaagaacgacatatttcgcc
gtccacaaccctgaccgaaagtgactgtaccacccctttgTCGCCCTTTG
TCACGGAAATTaaactacatgtggtctaaaatTACGCAAAATTACGCATG
TGGATAAGTCTCTATTTGGTTGAGCTGGAATcattagatgaactaactcG
TATGGTTCAAAAGTGGAAAATATAAAGACTATTCGTGATagttatgacgt
aatgttttatactgAAGCACCAAAACAGGAACAGGTGTTCGACACTAATT
TGGaattagaacaataaaaattaaaaaagtgctTGTAATCCATTTCGTGT
TTATGTTCTTTCACTTTAGGTATCATCCAAACAACTTTAGGAGTCGTTTC
TTTCGTTATCGGAATTTTGATGCCAATCTTACTTAAACATTCATTGAACA
ATGCTGGCTTTGGTATATGGTGTGGAGTGTTGACTATCATTGCTGGAGCA
CTATCCATTGCCATGGGTTACACACCGGATTGGTTCGGAACACGATGTGC
CGCTTTAACTTTCTGTGTTTTTACAATCGTCTGCTCCTTCCTGGCTGCTT
TGTTGCATTTTCTGGAGTTTGGGTAAGATTTTAATATTATGGCTCAGATA
GACTTTAAAAGCCGTCGAGCGTCTTTTTCTTTCCCATCTGAAACACTTTG
GAATCTTAAGCTTTTCTCCACATATCTTAAAGGTTTAAATCTTTCTCACC
GTGAGGAGATTGAAGAATTGGCTACCCTCTTCAGGGCTTAAAAATTCAAT
GTTATACCTTTGGAAGCTTTTGGAAACAAAGTACTATTTTATGGTTAAGG
AATTCCCAATAACGGCCTCTAGAGTTGTTTCAATTGTTTCGGAACAACTT
CACTGGAGTTGAAAATCATGTCACAGTGCAAAAAATTTAATGCTAcaggt
tttttataaaaagcatcCAAAAtgtttaaagccttcggatgttcttgact
ttttgagcCTAAAACATGTTCTTAGTTTCACCGCTttctgaatatttttg
tccattttgccagggatatgttatagcggagctggataacgcatatttaa
aaaagccttgttctatatctgtccctgacattaaaatttgatatgaaatt
taacttttttatttacaaactcgtaaaatttggatttcctctcagccaat
gattctgctgctgcatttatcttTATCGtccacgattaaaaacttttgat
tatcaagagggtctgtaaaacattgttgaatgacaattaaaaaaaatgaa
aaacattgttttcattagtaaagttataagaaatttcttctgtaagatta
taaatagtactttttcatttgaaataccgcgatacaccgcggggtgcctc
actttctaactgatattttcagatagcaagtcggtatgtctgatgttgga
agaaatttcaaatcaattgaaacaatatttgtcaaaatatttacatccga
aatttttaaagagaaatcatgaaagcttctcaaattcataacacacgctg
ataaaaatagatttcatttacaaggaggCTTTTCGGGTATCttctataaa
tttttttttgatttagcaATCCGCTAAAGAATATTCGttcttcatccagc
tccgctataacatatctcTGATTTTGCTAAGAAATCAGAAGTTTTAGGGC
CTGCGAAaccttacaatgttcttagcTTACTCTTAATATTTTTCGAAGCC
TTaaattcttatatagtttgttcttataaaataaatttgtatgtCATCCT
GGAAAGATTTAAAAGTCCACAAACTTTATTACTACAGGAACGCTGTAAAA
TGTGACGCTCAAATATGTAGCATAAGAAGGATGTATAGTCAATACTATGG
CAACTACCGATGGAAAGAATACAACTGTAGTTCTAGTTGTGACTCAAAAA
ATACTGGCAGTTACTTCCTTTCTTTGCTGTTGGCTTTGACCATGGTAGCC
ATCTTTATTTTATCCATCATTAATGCAGTGATTACAGCACGTGGATGTTG
CAATTGTTGTGATGGTTGTTGTCATGGCAATGATGGGGGCGATGAAGGTT
AGTAACCTATCCATTTTTCTCTCTTGATATAACATTTCACATAAATTTTA
GGACTCAATTTtaaggtgggggggggggcgtctGACAATTTgtttaagaa
aatttgaaaggcTGTACGAGTCTATTCAAAACCACGAGGGTATAAATTTA
TGCCGAAAATCAGGTGGTTTCAAGtaatgacaatttaaaatttcccttaa
aaaccaaatgaaaatatttctacaaaaaattaCAAGTTACCGAATATTCT
GAAGAGTGCACTGCAGTTCGGTCAAAACGGAATGAAAAATACTCACAGAT
ATTATGTTTGATTCGTCAGCTTGGTTTTATCTTATTCTCCAATGGCTGTA
CCGCAGCACTATCCGAATTTTTGCGATTTCAgcgcttttgattgttaagg
gaaaTTTATAGGTAAGTACCGAAAACCATTATATCGGTTACACCATTAGA
ATAAATTTGCATCTTCACCGGACTAAGGCTTTTCTGGGATTgtttcaatg
tattttttcgAGCTAGCAAGCTAAGCTGCAACTAGCCTTGTCTTGGTCTC
TTTTCTCTTACCAGAGTCTGGCttaccagctggcacacaacgttgtcaTC
TAGCGTTATATGAACgctgtgaacattagataaacgttgaaacgactTTG
TATGCTAGCTGGGTTGTTTACTTGGCCAGAAGAATCTTACTGAGGAAAAT
GTAAAGTTGAAGGACATCACCTAGCCTGtactagacgtcacggctttttt
ttACGCTTTAatgtctattccactttgcgactttttcgaatgttttgagc
ccaggttttcgggctctaaacattcgattatttgacgtcacttaAAACGt
ttgaagctcctgcagtatcaAAATAGTCGAacttgcgtcaaaacacttga
aagaaACGGGATGAAGAACTCCAGTTTTTGGTGAGGTGTATATGATGTCT
ATGCATCATCAAACCTTTGCTTACACAGAATTTTTAGAAAGAACTagcaa
aaattgagaaattctttCGTTTATTCTGCTTAGTActttctttttacatc
ataaaatttaacttttcataacatttttacatctttacatctttgcatca
taaaaataatttctttaacgTCCAGTATATCATGTTTCCtttttttCGTA
ATAGTATTCACTCAGGGGAAAAATGGAAACCTCGACCAGCAACAACACAA
CCGTCAACCGACCATGAAAACTCCGCAACGACAAGGAACCGTTGTCGCCC
ATAGTAACCAAGCGTTTGATAATGTTGCTATGGTAACAACGCACGAATAT
CCACAACAAACGACTCTATCCCGCGCTGTCTCACACACTCAAGTAAATAT
TACCCCGCAACAAGTACAACCTGTGATTGCAGCATAA Coding sequence (CDS) from alignment at sc0000063_pilon:213596..219282+ >XLOC_033593 ID=XLOC_033593|Name=XLOC_033593|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2634bp|location=Sequence derived from alignment at sc0000063_pilon:213596..219282+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAATAGTCATCAGACAACAACAACAGCCTACCATAATGCCTGCTTC
TTCTGAAGAAAGCATTTATGCCGCCCAACAAGTACCGCCACCACCTCCAT
TACCCTCAAACGTTGGTGGTACGCCTAGAGGTGGAAGTTTTGAGAGTGAA
CGACGCCCATCCTTACCGCCAAAGATGTCAATAGTCATCAGACAACAACA
ACAGCCTACCATAATGCCTGCTTCTTCTGAAGAAAGCATTTATGCCGCCC
AACAAGTACCGCCACCACCTCCATTACCCTCAAACGTTGGTGGTACGCCT
AGAGGTGGAAGTTTTGAGAGTGAACGACGCCCATCCTTACCGCCAAAGAA
CTACCAACACCTTGAACAGATCTACGCCAACGTTCCACCACAGATGATGC
AGatgaacaaacaaaaacaattatcCAATATAAACAGTGGCTCCAATCTT
ATTCAAGCTGAACACCAATCGCCATACAGAGGAAGCCCAGAACTACCAAC
ACCTTGAACAGATCTACGCCAACGTTCCACCACAGATGATGCAGatgaac
aaacaaaaacaattatcCAATATAAACAGTGGCTCCAATCTTATTCAAGC
TGAACACCAATCGCCATACAGAGGAAGCCCAGatGTTAACAGTCAACGAG
AAACTTTTAAATCAACATACATACAACCAACCAATCTTGGTGCAACATAC
ACACAATCAACTAATCAGGGCACACCTCTTAGTCAACGAGCCAATCAAAA
CACACCAATTTCTCAACCAGCCAATCAAAACACACCACACGTCCAAGTTC
AtttctttcataaaaataatcaaaaagcaCGTGCAGAAGAATACCAGAGA
TTTTTGATGTCTAAAATCAACGTTGCAAGATATACAGatGTTAACAGTCA
ACGAGAAACTTTTAAATCAACATACATACAACCAACCAATCTTGGTGCAA
CATACACACAATCAACTAATCAGGGCACACCTCTTAGTCAACGAGCCAAT
CAAAACACACCAATTTCTCAACCAGCCAATCAAAACACACCACACGTCCA
AGTTCAtttctttcataaaaataatcaaaaagcaCGTGCAGAAGAATACC
AGAGATTTTTGATGTCTAAAATCAACGTTGCAAGATATACAGGTATCATC
CAAACAACTTTAGGAGTCGTTTCTTTCGTTATCGGAATTTTGATGCCAAT
CTTACTTAAACATTCATTGAACAATGCTGGCTTTGGTATATGGTGTGGAG
TGTTGACTATCATTGCTGGAGCACTATCCATTGCCATGGGTTACACACCG
GATTGGTTCGGAACACGATGTGCCGCTTTAACTTTCTGTGTTTTTACAAT
CGTCTGCTCCTTCCTGGCTGCTTTGTTGCATTTTCTGGAGTTTGGGTATC
ATCCAAACAACTTTAGGAGTCGTTTCTTTCGTTATCGGAATTTTGATGCC
AATCTTACTTAAACATTCATTGAACAATGCTGGCTTTGGTATATGGTGTG
GAGTGTTGACTATCATTGCTGGAGCACTATCCATTGCCATGGGTTACACA
CCGGATTGGTTCGGAACACGATGTGCCGCTTTAACTTTCTGTGTTTTTAC
AATCGTCTGCTCCTTCCTGGCTGCTTTGTTGCATTTTCTGGAGTTTGGGA
ACGCTGTAAAATGTGACGCTCAAATATGTAGCATAAGAAGGATGTATAGT
CAATACTATGGCAACTACCGATGGAAAGAATACAACTGTAGTTCTAGTTG
TGACTCAAAAAATACTGGCAGTTACTTCCTTTCTTTGCTGTTGGCTTTGA
CCATGGTAGCCATCTTTATTTTATCCATCATTAATGCAGTGATTACAGCA
CGTGGATGTTGCAATTGTTGTGATGGTTGTTGTCATGGCAATGATGGGGG
CGATGAAGGAACGCTGTAAAATGTGACGCTCAAATATGTAGCATAAGAAG
GATGTATAGTCAATACTATGGCAACTACCGATGGAAAGAATACAACTGTA
GTTCTAGTTGTGACTCAAAAAATACTGGCAGTTACTTCCTTTCTTTGCTG
TTGGCTTTGACCATGGTAGCCATCTTTATTTTATCCATCATTAATGCAGT
GATTACAGCACGTGGATGTTGCAATTGTTGTGATGGTTGTTGTCATGGCA
ATGATGGGGGCGATGAAGTATTCACTCAGGGGAAAAATGGAAACCTCGAC
CAGCAACAACACAACCGTCAACCGACCATGAAAACTCCGCAACGACAAGG
AACCGTTGTCGCCCATAGTAACCAAGCGTTTGATAATGTTGCTATGGTAA
CAACGCACGAATATCCACAACAAACGACTCTATCCCGCGCTGTCTCACAC
ACTCAAGTAAATATTACCCCGCAACAAGTACAACCTGTGATTGCAGCATA
ATATTCACTCAGGGGAAAAATGGAAACCTCGACCAGCAACAACACAACCG
TCAACCGACCATGAAAACTCCGCAACGACAAGGAACCGTTGTCGCCCATA
GTAACCAAGCGTTTGATAATGTTGCTATGGTAACAACGCACGAATATCCA
CAACAAACGACTCTATCCCGCGCTGTCTCACACACTCAAGTAAATATTAC
CCCGCAACAAGTACAACCTGTGATTGCAGCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:213596..219282 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1087-1317:5457 |
| Aaloc | 826-1083:4039 |
| Aaloc | 574-822:2572 |
| Aaloc | 319-570:1859 |
| Aaloc | 175-315:1196 |
| Aaloc | 1-174:1 |
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