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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000063_pilon:199848..206253+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033592 ID=XLOC_033592|Name=XLOC_033592|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6406bp|location=Sequence derived from alignment at sc0000063_pilon:199848..206253+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAGAAACATATAAAATAATGTTGATTTATTGGATAGCCATCTTATGTTT
AATTACCTCATCATTAACCAGTAAGTTTTATTAATTGGGGGTAATTACGT
CATCAATCTCGTGTAATTGAACTCAACTAAAGAAAAGTTGAAGGTCATTT
TCATTCTAGAATTGGGGCTTGGTTGGCCGTCGGAGATGTGTCACTAAGGC
TGGAGAAAACAAgatcaaattaaattttagcaTTGGCAGACAAAATTGAT
TTGTAAAATGTGATATCTTTTGCAATAAAGTTGAACTACTACACTACCCC
TGGGTTTTCAAAAACTGTTAGTGATTTTCCTGGGACCTTCAAGGTCTTTG
TTGAACAGGATATGTGAAAATCTGAGATGTGGTATAAtgtatcaaattaa
aatttactACGGAACAAAAATCATGTTTCAAAAGGTGATGATATTTCTTC
TTAGAGCCGAAAATACATCAGTATATAACACCCCCTGTCTCAAAGCCCGG
TGGAATTTTCTTCCCATAAAGGGGATATCCAGGGAGGGTGGgtttttgga
gtgcaatttcctCCATTGGATTTTTAATGGGGATACAatcaaaagtcaat
ttcccagtgagaCTGAAGATGTGGGGTATctttcccactggggacgaaat
CTTGTCTAGATTTTTCTATACAAGAGCGATAAGGcatcgatgaccaaaat
gttaagaacaaattgagaacattttaaaggctttgtggtctcaaaaaacc
cttttttttaggaaaatgggctAAAATACTCACaatatggtcaaaataag
aacatgttaagaacattttccggcttaaagctcaaaaagttaaaaacatc
cgaaggctagATCAGGGGTGTAAATAAGTACATGATAGAACGATTTAagg
cttaaaatgaaaaaaagaataagaaCCAGCCCAACCAGatcttcttacaa
aaaaaaaaagagtttctCATCTCATTTAACTCTCCTAAAATTTTAGGAGA
ATTGAGTAATGTACAGCAACAAAAACATGGCATTTTACAAAGAAACCGAC
GAAACGATCCTATAGAAGCCACGCGGAAACCACCCGTTTCTATGGCTGCT
ACTGGTAATGAAAGTAACAATAACAAAGGTAGGTATTGTTTTTAAACTAA
TCAcgtaagtgatttttttttcaatcctaACCGATGACCTTTAGAAGGTG
GCctattttttaaaataatttttggccACCTAAATCATTGCAACTATTCC
AAACTTCAAACTTGTGACCTAAACTTTTGCTTGGAAGTGGCTAGATAGTT
TGAAACGTATTTCACAGGTCAACAGTTTACAGGCGTTTACAGGTCACGGG
TCCGCGTTGCCAGGTCAGTTTTAATTACAGTAAACactaaaaaattttaa
tatggCCTGTGTATCTATGACCTGTGATTTGCTGACCTGTACCAGTGACC
TGCAACTATCGAGCCAACCTTGGAAGTTCTCAATACAGCTAAGCTAACGA
GTGTATTGTTTTCTGGGAATCACAATATCATGTTGGAGACCAAGACTCTG
TTAGAACTCTAagaagtaaaaaactttttctctttttagataACGAAGAT
TTGAAGATAGGTCTGATTGTTGGTGGTATTTGTGCAGTCTTGATTGTTCT
TGGCTTGTCCATTCTCACGTGTCGATGTTATGACAAACatgaaagtattt
tttattCAGTGGAGAAGAGGGTGAGTGATCAACAGAACCAAGCTGGCACC
CAGCGTTGTTTCAACACGTTCATTTTACgttatggacgttgtgaacgctA
GAAAACGTTAAGATaacgctgtgtgccagctgagaaTGATTGCAATTcat
tacacccccttcttacagacccaataggattttttcagccagtgggagta
aaaataatggactgaaaATCGATGGGGGTTGATAATCCCACAtttcttat
ggctggggatttaaagtcttgaaaaacaaaaacccCATGGCTGGGGATTG
AAAGTCCATTGTtgtcaagtcagaaaattcaatggggatggaaaaaagaT
CATAATATCATCCAGTGAGGATTAGTCTATTTGATTATTTCAGTGGatac
aaaaattggagtataattttccaccgacgatattttggtcaatttttcca
ttaggtctgtgagaagggtgtgtTTCATTGAATTTCACATGACTATAATT
AACATCTACGAGAAAATGTTGAAGCTTATAatataccttttcgaccgtag
ccgccaattgccaagCGGGTATTGTTTTGTCCCATTTATCcaactaaaac
cgtcccagtcctttttccgcacctatagacaatagaaaaatgtgtcaaaa
aaggattggatctagtttagggggataataaATAATCAAGTGGCAGGCGC
CTGACCACACGACTACGGTCGAAGAGGTGTATTGCAATTCACTCGATGgt
gattgatattcccatattttttttatgactggggatttaaattcttttgt
tttaaactcAGAAAATTTAGTGGGGAGAGGaaaaaaagcatattttgcag
tgagcAATCAAATGtttatttgattgatttgagtggggacaaaaattgga
gtataattttccaccggggacgatatttttgccaattttccagtgggaaa
gggTTCCCATtcggtctgtgagaagggggtgtttcattaaattatatttc
acaggacTATAATTGACCTCTACGGAATAATGTTGAAGCTTAAAACCCAG
CaagcacacaacgttgcttcaacgttcaAATAatgttatttggacgttat
gaatgtcaaatggacgttaaTACGACGTCGAGTGCCGACagggaatacac
cttttcaaccgtagccgccaattgccgcgtgggcatttttttgtcccctT
TATCcaactaaaaccgtcccagtcattttttcgcacctatagacagtaga
aattgtgtcaaaaaggattggatcgactTTAGGGAGATAATTAAATTATT
AGATTGTACGCGcctgactacggtcgaaaaggtataCATATCTAATCCTT
GTCTATCGTCCAGTCtgtagaaaaaaatagaaagaccGGGCgtttttttt
ggtctttgtcctagagGGTTTCGAAAATTAGGAAAAGACTTTTTCTGGGC
TGGTCCGTTTATATTTTCTAAGTTTCCTTAACCCATTAAGTGCTATCACT
TTTAGACGTACCGGTACATGACCGAAAACTTTGGCACTCTCATATGATAC
CAGTGGCACTTAAATTCccccaatagacctttttataaattacgtcaaga
acatcacttgcctcgttctCAAACAATTGCCATgatgattatgtcccttg
aggcaataaatgatttttttttaatgaaaagaaaGTAGTTTTGATGAAAT
CCCCTgagagttaatcaccatggcaataatttcacaACGAGGAAAGTGAT
GtttgtaacgtaatttatgaaaagttctATCCCAGGTCTCTAATAGTGGA
AACTCTCTTTACTACAGACACGTCTGAGTCAAATCAAAAGAGAGGAAGCA
CATGATCCTTACACTATGGTCATTTCTCCAGAAGCCGAAGTCATTGAACT
GGATGAGACGGATGGAAAAGAAGGTGGATTTGAAAGACCACTGACCACTT
TTCAACCGTATACAGGTATTTAAGTAATAAAGTATGGCCTTAAAGAGAAA
GCCTTATTCTAGGAGATATTGGatttatagcaaatttttgctttagaGAA
GACAcaccaaaatatttattattactgacgtcatcaatgtgTGCTTTTCA
GTATGGGATGTGGAAATAGTATAGACTTTTAGACTATCTATTTTGGTTGG
GCTTAGGTGGGGTTAGGGTGTGGTCAGATATCAAGGAGGGTTGAGATTAA
GTTATTATCAGAGGATAAGTGTTAGAGCTCAAAAAACAAGCCCTTGTTTA
CATTTTTACCTGCGTTAATGCTTTATCATAACCGCACTCAGATTCAATTC
ATCGACAAACGGCTCAAATTTAAGGGTTGTTGAAAACCCTTTTAACTTCT
GcatatattttcaaaagtttctccTCGTTTTCTTTATCTGTAGGTACTTT
CACAGCCTTTCCCGGTAAAAACAACAATTTCACCAGTAATAATCGAGACT
CTGGTATTTCCTTACTGGACATTTTGGATGAAAGAGACAAAACAACTCTT
ATTGATCCACTTGAAGAAAGTACTTTTGCCAGAGAAGGAACAGTTCATAA
CCCATTGTATCAAGATCATGGAGGTGTTGATAATGAAGGGATGGAACATG
ATGATGACGACTCGGATAATGAAAAGGTATAGGCTGATTCGGTAAATTCT
ATTTAGGCACTATCGTCAGGAAAATCTCCAGGAAGCtgcctgttcctaac
tgactgatttttacccacgaaataaaaataaagactaCTTGCTTGCTTGC
AAAGGCTATTTGCAGGTCTAAACGGGAACACTGAACGCCTAAAAATTAGC
AAGTGGTACTAAATCTTCCTGTACAATTTCTTTCtgtcattttttggaaa
attggttgatcgtgggtgaaaatgacgtcagATATATTTCTTATATGATT
GGCACCCTGCTATGTCACTTTTCCAAATACTGATTGGTTTAAAAGCACGT
ATTTTATCCCCGTTAATGCAACAACAGTTGCTTCGACCTTCATTTAACGT
TTATGGGCGTTATGAAGGCGAAATGGACGTTATATCGGGCGTTTTTCTAA
ACACTagtaacgtccatataacgtcatATCCCCGTCCATATGAAACAGCG
TCTTGTCTCATAAAGGAGGGCTGagagctagatgtcgtgctttggctgaa
aagtgtgctgaggttaggtaggaaatcgtacctaggtcacgtgacattac
aatagaatttcagcacttgaccaatATGATGCTTCGCGggtttcgaaaac
aatagcattaatatttcactattttttgcttggaaaagtataaagtacga
catctatcccttcgggctttacagaaatctgtggtctCGTCattggttta
tttttctttctcatctCTTTCTTTAAAACCCAGACATCAGAAGCTGAAGC
ACAAAATGACGAAGaatttccaaacatttttgATGACAGTTTCTTTAAAG
AACCAATCACCTTATTATCATATGCAAAGAAACATGAAGAAGATGACGGT
GCTGGTGATGTCGACTCCAATACAATGTCAATAAAATCTGGTCAATCTGA
TGCACCATCTGATGATAGGGAAGATAGTGATCCATACCAAAGAGATTTCA
ATGAGAACCAATCATCCAATACATACGAGGATATTAAAGAAAGGGAATAT
GAAGATATCAGAGATGCTACCAACAACACCAATTATGATGATGATTCTCC
TGTAATCAAGGAACCAGATTATGCAACAATACCACGGAACACTCGCCCAT
TAGTCATTGAGTCCGACTCTGAAAATTCATCACCAGAACCTTCGGATGAT
GAGGATGAAGAACCTTCAGAATCACCGAAAGAGGAAGTTAGTTCTGATAA
TGCTCGATCTTTATTGAGAACTGGGTCTGTTGCCAAACTGGTAAACGCTT
TCTTGACTGGAGATGTGAACAAACGAGCTAATGATAGTGAAGATGATATC
TCCAGCAATGATGGTGATCAAAGCCCTGTTGATGCACAGGCGTATAAGAA
TCCAAATTACCAACGAGAGAAAACATTATTGAGATCCTATTCGAATCCTC
TTTTCGAAGatgaagatgttgaaaattcaGAATCTAAAGATGCTGAAACA
TCACCAGTAGAGTTGAAGGATGAAAATCATTATCTCAAGGCTGTAGACAG
TCCAGTTGTTGGAACAAGGATTTCAGATCCTACTCTTGAAGAGGAAGACA
CATTCAACCAATATCTAGACCAATCGACAAATGCTAATAATACCGACGAT
GAAGTTGCCAATAGAGGTCTTTTAGATTCTGGCGATTTCACACCCAAAAT
TTTAGAAGCATCAGAACCAATCAACAACCAGCCAGAGCTGTTTTACAAAG
ATGGCGACGATCCCGCACAGAAACAACTAAACAAAACTCCAGTCCCAGCA
CCAAGGAAATCAATCAAGATCGTTGCCACAAGTAGAGCTTCGATTAAAAG
TCCTACTAAAAAAGATACTAAATCCAAACAGGAACCGTCCTCGAAGCCTC
CACCTCCACCAGTAGCTGTTAAACCAACCAAGTCGTTTGATCGAGATGAA
GCTCTACCAGCTATAGGAAGTCCAACAAAGAAACAGCCACCTCCTGTTGC
TCCTAaacaattttcaatcaaaagagGTCCCGTTAGATCACAGACTGTTC
AGCCTGTTAGACGAGCTCCCGCACCGCCTCCTAGAGTTCCTTCTGTCAGA
TATTAA Coding sequence (CDS) from alignment at sc0000063_pilon:199848..206253+ >XLOC_033592 ID=XLOC_033592|Name=XLOC_033592|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4074bp|location=Sequence derived from alignment at sc0000063_pilon:199848..206253+ (Clytia hemisphaerica_ch_hm2_pilon)
GTAGAAACATATAAAATAATGTTGATTTATTGGATAGCCATCTTATGTTT
AATTACCTCATCATTAACCAGTAGAAACATATAAAATAATGTTGATTTAT
TGGATAGCCATCTTATGTTTAATTACCTCATCATTAACCAGAGAATTGAG
TAATGTACAGCAACAAAAACATGGCATTTTACAAAGAAACCGACGAAACG
ATCCTATAGAAGCCACGCGGAAACCACCCGTTTCTATGGCTGCTACTGGT
AATGAAAGTAACAATAACAAAGGAGAATTGAGTAATGTACAGCAACAAAA
ACATGGCATTTTACAAAGAAACCGACGAAACGATCCTATAGAAGCCACGC
GGAAACCACCCGTTTCTATGGCTGCTACTGGTAATGAAAGTAACAATAAC
AAAGataACGAAGATTTGAAGATAGGTCTGATTGTTGGTGGTATTTGTGC
AGTCTTGATTGTTCTTGGCTTGTCCATTCTCACGTGTCGATGTTATGACA
AACatgaaagtattttttattCAGTGGAGAAGAGGataACGAAGATTTGA
AGATAGGTCTGATTGTTGGTGGTATTTGTGCAGTCTTGATTGTTCTTGGC
TTGTCCATTCTCACGTGTCGATGTTATGACAAACatgaaagtatttttta
ttCAGTGGAGAAGAGGACACGTCTGAGTCAAATCAAAAGAGAGGAAGCAC
ATGATCCTTACACTATGGTCATTTCTCCAGAAGCCGAAGTCATTGAACTG
GATGAGACGGATGGAAAAGAAGGTGGATTTGAAAGACCACTGACCACTTT
TCAACCGTATACAGACACGTCTGAGTCAAATCAAAAGAGAGGAAGCACAT
GATCCTTACACTATGGTCATTTCTCCAGAAGCCGAAGTCATTGAACTGGA
TGAGACGGATGGAAAAGAAGGTGGATTTGAAAGACCACTGACCACTTTTC
AACCGTATACAGGTACTTTCACAGCCTTTCCCGGTAAAAACAACAATTTC
ACCAGTAATAATCGAGACTCTGGTATTTCCTTACTGGACATTTTGGATGA
AAGAGACAAAACAACTCTTATTGATCCACTTGAAGAAAGTACTTTTGCCA
GAGAAGGAACAGTTCATAACCCATTGTATCAAGATCATGGAGGTGTTGAT
AATGAAGGGATGGAACATGATGATGACGACTCGGATAATGAAAAGGTACT
TTCACAGCCTTTCCCGGTAAAAACAACAATTTCACCAGTAATAATCGAGA
CTCTGGTATTTCCTTACTGGACATTTTGGATGAAAGAGACAAAACAACTC
TTATTGATCCACTTGAAGAAAGTACTTTTGCCAGAGAAGGAACAGTTCAT
AACCCATTGTATCAAGATCATGGAGGTGTTGATAATGAAGGGATGGAACA
TGATGATGACGACTCGGATAATGAAAAGACATCAGAAGCTGAAGCACAAA
ATGACGAAGaatttccaaacatttttgATGACAGTTTCTTTAAAGAACCA
ATCACCTTATTATCATATGCAAAGAAACATGAAGAAGATGACGGTGCTGG
TGATGTCGACTCCAATACAATGTCAATAAAATCTGGTCAATCTGATGCAC
CATCTGATGATAGGGAAGATAGTGATCCATACCAAAGAGATTTCAATGAG
AACCAATCATCCAATACATACGAGGATATTAAAGAAAGGGAATATGAAGA
TATCAGAGATGCTACCAACAACACCAATTATGATGATGATTCTCCTGTAA
TCAAGGAACCAGATTATGCAACAATACCACGGAACACTCGCCCATTAGTC
ATTGAGTCCGACTCTGAAAATTCATCACCAGAACCTTCGGATGATGAGGA
TGAAGAACCTTCAGAATCACCGAAAGAGGAAGTTAGTTCTGATAATGCTC
GATCTTTATTGAGAACTGGGTCTGTTGCCAAACTGGTAAACGCTTTCTTG
ACTGGAGATGTGAACAAACGAGCTAATGATAGTGAAGATGATATCTCCAG
CAATGATGGTGATCAAAGCCCTGTTGATGCACAGGCGTATAAGAATCCAA
ATTACCAACGAGAGAAAACATTATTGAGATCCTATTCGAATCCTCTTTTC
GAAGatgaagatgttgaaaattcaGAATCTAAAGATGCTGAAACATCACC
AGTAGAGTTGAAGGATGAAAATCATTATCTCAAGGCTGTAGACAGTCCAG
TTGTTGGAACAAGGATTTCAGATCCTACTCTTGAAGAGGAAGACACATTC
AACCAATATCTAGACCAATCGACAAATGCTAATAATACCGACGATGAAGT
TGCCAATAGAGGTCTTTTAGATTCTGGCGATTTCACACCCAAAATTTTAG
AAGCATCAGAACCAATCAACAACCAGCCAGAGCTGTTTTACAAAGATGGC
GACGATCCCGCACAGAAACAACTAAACAAAACTCCAGTCCCAGCACCAAG
GAAATCAATCAAGATCGTTGCCACAAGTAGAGCTTCGATTAAAAGTCCTA
CTAAAAAAGATACTAAATCCAAACAGGAACCGTCCTCGAAGCCTCCACCT
CCACCAGTAGCTGTTAAACCAACCAAGTCGTTTGATCGAGATGAAGCTCT
ACCAGCTATAGGAAGTCCAACAAAGAAACAGCCACCTCCTGTTGCTCCTA
aacaattttcaatcaaaagagGTCCCGTTAGATCACAGACTGTTCAGCCT
GTTAGACGAGCTCCCGCACCGCCTCCTAGAGTTCCTTCTGTCAGATATTA
AACATCAGAAGCTGAAGCACAAAATGACGAAGaatttccaaacatttttg
ATGACAGTTTCTTTAAAGAACCAATCACCTTATTATCATATGCAAAGAAA
CATGAAGAAGATGACGGTGCTGGTGATGTCGACTCCAATACAATGTCAAT
AAAATCTGGTCAATCTGATGCACCATCTGATGATAGGGAAGATAGTGATC
CATACCAAAGAGATTTCAATGAGAACCAATCATCCAATACATACGAGGAT
ATTAAAGAAAGGGAATATGAAGATATCAGAGATGCTACCAACAACACCAA
TTATGATGATGATTCTCCTGTAATCAAGGAACCAGATTATGCAACAATAC
CACGGAACACTCGCCCATTAGTCATTGAGTCCGACTCTGAAAATTCATCA
CCAGAACCTTCGGATGATGAGGATGAAGAACCTTCAGAATCACCGAAAGA
GGAAGTTAGTTCTGATAATGCTCGATCTTTATTGAGAACTGGGTCTGTTG
CCAAACTGGTAAACGCTTTCTTGACTGGAGATGTGAACAAACGAGCTAAT
GATAGTGAAGATGATATCTCCAGCAATGATGGTGATCAAAGCCCTGTTGA
TGCACAGGCGTATAAGAATCCAAATTACCAACGAGAGAAAACATTATTGA
GATCCTATTCGAATCCTCTTTTCGAAGatgaagatgttgaaaattcaGAA
TCTAAAGATGCTGAAACATCACCAGTAGAGTTGAAGGATGAAAATCATTA
TCTCAAGGCTGTAGACAGTCCAGTTGTTGGAACAAGGATTTCAGATCCTA
CTCTTGAAGAGGAAGACACATTCAACCAATATCTAGACCAATCGACAAAT
GCTAATAATACCGACGATGAAGTTGCCAATAGAGGTCTTTTAGATTCTGG
CGATTTCACACCCAAAATTTTAGAAGCATCAGAACCAATCAACAACCAGC
CAGAGCTGTTTTACAAAGATGGCGACGATCCCGCACAGAAACAACTAAAC
AAAACTCCAGTCCCAGCACCAAGGAAATCAATCAAGATCGTTGCCACAAG
TAGAGCTTCGATTAAAAGTCCTACTAAAAAAGATACTAAATCCAAACAGG
AACCGTCCTCGAAGCCTCCACCTCCACCAGTAGCTGTTAAACCAACCAAG
TCGTTTGATCGAGATGAAGCTCTACCAGCTATAGGAAGTCCAACAAAGAA
ACAGCCACCTCCTGTTGCTCCTAaacaattttcaatcaaaagagGTCCCG
TTAGATCACAGACTGTTCAGCCTGTTAGACGAGCTCCCGCACCGCCTCCT
AGAGTTCCTTCTGTCAGATATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000063_pilon | genome | sc0000063_pilon:199848..206253 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-2040:5084 |
| Aaloc | 487-717:4096 |
| Aaloc | 337-483:3518 |
| Aaloc | 208-336:1592 |
| Aaloc | 76-204:999 |
| Aaloc | 4-72:1 |
|
