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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000356_pilon:308535..312699+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033591 ID=XLOC_033591|Name=XLOC_033591|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4165bp|location=Sequence derived from alignment at sc0000356_pilon:308535..312699+ (Clytia hemisphaerica_ch_hm2_pilon)
atagatgtaaacaaagaaaataaaatagagaaaagaaaacaaagagaaat
gaaGCTGGAACTGGATTATGTGAAGTCATATTTTGGCATCATCAAGATCG
CTGAATTTGTAAGTCATACAATATTTTATAAGACGATATAGTAGTTTTCG
ACCACAGTTAAATGGTTATCTACCCGAGGGTATGGGATGAGCGTCACTCT
TTTTCCCTGGATCGCCCCTCCCTTGATCCTTTAATTACCTTAAGCATCAA
GCAAAGAGGAATCAAGTACTATTTTGgtacgaagtctttggtatgacccg
gccatGGATTGAACACACAACCTTGAAAACCATATCCGAATGCTCTACCT
TTGCAGCTATTGTCGTAGTAGATCAAAGAAATGCGCTTTGTCAAATAAAA
CACCAAAATTTTAacctttctatttttttcataaaacctagaatgttttg
aaaataaggaaaaaatatttgtattttatAGGTTAGGTGAAATAGTAGCT
GAACTTTTTAGGCAGCCAGTATCAAGGGCACAGGATGTGCACGCATTTTG
CACAGTCAGGCAACTATTTTTTGCACGTTAACTAGATGAAATTCGTAGGG
AGACCTTGAAAATTGTCCAGCATTTTACCAGTAATGTGGAAATGTCACGA
TACTTATGTGATAATTAAATATACGACTTTATTTTTCAGTCTTCACTTGG
TATTAGCTGGATATGTATGACGACTTATTTTGACAGTACGTTCAGTCAGA
TGGGAGGCAAAAATGTCTTCTTCATTGCAACTAGTATGGCATCTTGGATT
ATTGTTCTTCTTTGGTTCATCACCTTTTTAACAAGTCAATGCTATCGAAC
GCCATCACCCACAAAAATGCTCATTGTAAGTATGTGGTCTGGGTGGACCG
GGGCCGGGGAAGGACAGGCAAAACGAGGTACTAGTAGGAGATGTAACAAG
ACAGGGTTCTTTAGAATTTAGTTGTAAACTGCTGATTGAAGGTCAAAAAC
CTCTAaacgaaaaattttattttgacccATATCGAGTTTTGGTACCATTA
GGTTAAcactttttctaaaaactccgatcagacagtagtggggtcgttta
gcataatttacaggaaaaaaataatatctagctagctgaaactttcttcA
GGCCTTCTCTacaggatggttatgcctcaggaaaaaatcccctaaaatcc
cactggtggaacataccttttttgggcaatttctgttttccccaggcaaa
accctaaaggcgagattttttaaaagtttcaaactcattttcagacaata
tcatgtatgcCATTCGAaggctctcaaaaaactatatagaagacttttaa
acggttatatcCGATTTCCTTACCTAGTTAATCACGTTTGTTACAGATTG
GTATCTTACACTTGGCTTTCTTCAATTTGCATTTAATATCTGGAGCCTTG
GTCATTGATAGTAAAACAAATTCAGAGATGTCATGCAGAACCATCGCATA
TCACGAATGTACGATACAGAAATACAACTGTGCAGCAGTGAGTAAACGTT
TCATACCACAGTTTTaaaaagcccaaagggctagatagaaaactttggct
gaaaagtatGCTGTggctaggtaggaaatcctacctaggtcacgtgacat
tacaatataatttcagcgcttgaccaatcagaagcttcgcggattttcga
aatcaatagcaacaatattgtCTGCCATATTCACTTTATTTTGCTTAGAA
AAGCTTTAATCACTCCATCTAGTCCTTCGTGCTTTACAGAAATTTGTGTC
TCTTACTTGTtactacactcttttttataagaaccagtaaattcttTATT
AAGTCTCAACACtgccctgtctcacagccccggtggcaCTCTTTCTCATC
GGGGATAGaaactcctattgaaatcccaatgggaatagaaattttcattg
ttccaaggttgaaaaattcagtggggatggttttgaagtgcaatttctAA
GCACTGtctgaatttcgaatggggatataagatgaaagtcaatttcccag
tggggtttaAATTCTAGGGTAATTTCACACTGGGGAcgaaatattttcta
aattttccagtggggctggggtcccagcgggtttgtgacacaggggtgtc
tcaaCTGTTCTTAACTGTTTGTTACTTTGAGGTTCAttgttttaaattgt
tcttattttaggataaaatttggaaaaaaattaggaTATAATCACTtgat
attcttaatatttttgcaaTTCCATGATcgttaaatttttcttatttctt
gACGTTTTGGAGCCTCACCAGGCCTCACTGGTCTTAGAAATTGTTTTAAT
GGGTCCGaattttttgtaaacatcataaaatgttttttaaataaattgcc
attttaaaaaaagaaaatctttcacaaaaatcgaaatttgacACCCTCAA
CAGTTTAGGGATTGAAATTAAGAGTATTAAAGTATGGACGGCTATGGacg
gcaaaatcatcgtcaaaactccgactaatatttctaaattttgacttaaa
agtgtctaataattttagagagtgtcacattctaattttgatattcttat
gacacaggctctcaactttggcaacctattttttcaagtcataaaaaaat
cattggagtgacaaaagggattcaaaagtatacacgcagttgaaattttg
cattttagagttaaaaatgttgataaaatatattgcaaacttgtgaaaaa
attcgaaaataatttttttgtgcattactgtaggagtaatgttcaagctc
tatcaatccttttacctaaataattcaaagaaataaaattatgacggaat
attgtcagatttttcataccaattttgaaatacaggcggttacgaagctc
gcttcaaagagacaataaaagatagacgtccagtcgtttatatgtctATG
CTTTATAACTCAAATGGTTCCTtcattaccctgagtatcagagtgaagac
caataatagaaatttgatCGCGCATGTGTCGATCTAATCACTGctagaaa
taatcaaagatgaagagcaaatattatcatattaatgtctagcagactgt
atcagtatgcagtttactatttacgaattccccagaaacctccaagtgta
gttgaaatgagtttctttcaaaagaaatcttttacattatTCCCAAGTGt
ctaacagtaattactaaacttttgattatggaaatgtcactttaattgaa
tcgaaataatagacagactttatgttatgattctctatcactgactcttt
ttaaaaagcgttgattacatttttgagttgtgttttcaacgacgggaata
aaaatatcaactttgaagttcatccaaaatcttggatggtcgtcatggtt
aattttctctgcgttgattgcgcgctgaatagaatctggattagTCGGCa
aagcgtcgatatatgatttcgatcTGTGCTTTTTACGGTATTCCTTCATT
TGAACAAGTGTTATGGTCCCCTCTGTTAAAAATGCCTTGTAAacattact
ccataactcgaaaattcttttaaaatttaaactttcaaaTCTGTGTTCCC
TGTGCggattcgagttatggagactccaatgTATTTTGAAATTGGTTTAT
AACAATTTTTCCACTGTTCACCATAGGCCTTTGGTATCATCTCATCAATT
TTGTTCTTGATCGATGGAGCGCTCCACATTGTACAACGTAAGAGATTGTT
CCCAGCATCTATGTCAGTAGAAGAACCAGCATCCATGACAGAGGAGGTAG
TACTAAAAATAACAACACAGTCTAAGTCATCAACGGAAAAAGCTACGGAG
TCCACAACAGAAGAGGCCACTGATTCAACAAAAGAAGCTACTGAGTCAAC
AAAAGAGACTACAGGTTCAACAACAGAAGCTACTGAGTCGACAACAGAGG
CTACGAAGTCCACAACAAAAGAGGCTTCGGATTCAACAGAAGAGGCTTCT
AAGCCAACAACAGAGGCTTCTGAGCCAGCAACAGAGGCTTCTGAGCCAGC
AACAGAGGCTTCTGAGCCAACAACAGAGGCTGCTGAGCCAACAATAGAGG
CTTCTGAGCCAACAACAGAGGCTTCTGAGCCAACAACAGAGGCTTCTGAG
CCAACAATAGGTTGA Coding sequence (CDS) from alignment at sc0000356_pilon:308535..312699+ >XLOC_033591 ID=XLOC_033591|Name=XLOC_033591|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1506bp|location=Sequence derived from alignment at sc0000356_pilon:308535..312699+ (Clytia hemisphaerica_ch_hm2_pilon)
atagatgtaaacaaagaaaataaaatagagaaaagaaaacaaagagaaat
gaaGCTGGAACTGGATTATGTGAAGTCATATTTTGGCATCATCAAGATCG
CTGAATTTatagatgtaaacaaagaaaataaaatagagaaaagaaaacaa
agagaaatgaaGCTGGAACTGGATTATGTGAAGTCATATTTTGGCATCAT
CAAGATCGCTGAATTTTCTTCACTTGGTATTAGCTGGATATGTATGACGA
CTTATTTTGACAGTACGTTCAGTCAGATGGGAGGCAAAAATGTCTTCTTC
ATTGCAACTAGTATGGCATCTTGGATTATTGTTCTTCTTTGGTTCATCAC
CTTTTTAACAAGTCAATGCTATCGAACGCCATCACCCACAAAAATGCTCA
TTTCTTCACTTGGTATTAGCTGGATATGTATGACGACTTATTTTGACAGT
ACGTTCAGTCAGATGGGAGGCAAAAATGTCTTCTTCATTGCAACTAGTAT
GGCATCTTGGATTATTGTTCTTCTTTGGTTCATCACCTTTTTAACAAGTC
AATGCTATCGAACGCCATCACCCACAAAAATGCTCATTATTGGTATCTTA
CACTTGGCTTTCTTCAATTTGCATTTAATATCTGGAGCCTTGGTCATTGA
TAGTAAAACAAATTCAGAGATGTCATGCAGAACCATCGCATATCACGAAT
GTACGATACAGAAATACAACTGTGCAGCAATTGGTATCTTACACTTGGCT
TTCTTCAATTTGCATTTAATATCTGGAGCCTTGGTCATTGATAGTAAAAC
AAATTCAGAGATGTCATGCAGAACCATCGCATATCACGAATGTACGATAC
AGAAATACAACTGTGCAGCAGCCTTTGGTATCATCTCATCAATTTTGTTC
TTGATCGATGGAGCGCTCCACATTGTACAACGTAAGAGATTGTTCCCAGC
ATCTATGTCAGTAGAAGAACCAGCATCCATGACAGAGGAGGTAGTACTAA
AAATAACAACACAGTCTAAGTCATCAACGGAAAAAGCTACGGAGTCCACA
ACAGAAGAGGCCACTGATTCAACAAAAGAAGCTACTGAGTCAACAAAAGA
GACTACAGGTTCAACAACAGAAGCTACTGAGTCGACAAGCCTTTGGTATC
ATCTCATCAATTTTGTTCTTGATCGATGGAGCGCTCCACATTGTACAACG
TAAGAGATTGTTCCCAGCATCTATGTCAGTAGAAGAACCAGCATCCATGA
CAGAGGAGGTAGTACTAAAAATAACAACACAGTCTAAGTCATCAACGGAA
AAAGCTACGGAGTCCACAACAGAAGAGGCCACTGATTCAACAAAAGAAGC
TACTGAGTCAACAAAAGAGACTACAGGTTCAACAACAGAAGCTACTGAGT
CGACAACAGAGGCTTCTGAGCCAACAACAGAGGCTTCTGAGCCAACAATA
GGTTGACAGAGGCTTCTGAGCCAACAACAGAGGCTTCTGAGCCAACAATA
GGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000356_pilon | genome | sc0000356_pilon:308535..312699 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 706-753:4118 |
| Aaloc | 436-702:3677 |
| Aaloc | 295-435:1397 |
| Aaloc | 109-294:690 |
| Aaloc | 1-108:1 |
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