XLOC_033509 (mRNA) -

Overview
NameXLOC_033509
Unique NameXLOC_033509
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000267_pilon:184414..185868-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033509 ID=XLOC_033509|Name=XLOC_033509|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1455bp|location=Sequence derived from alignment at sc0000267_pilon:184414..185868- (Clytia hemisphaerica_ch_hm2_pilon)
CTTGAAGATTCACGTCTGCTTGATAAATTATTGGCAATCGAGAAAGAAGG TGAATTTGACCAAAATAACAATACATCTGTCGATGAACATGGCAACATTC AACAGATGACCAAAATAATCTCCAATCAAACAATCGAACATGTTGAGATC AGACAAATGGCGAAAGCCATATCAAACCAATCTGTAGATCGCCAAAAATC GCCAGTAAACGATGAAGCAGTGATTCAAATCCATCACCAAGAAGATGTTG AATCCGCATTGGATTTTCAGGCTCTTGAAGAATCGTTCGAAAAGGTGGGT GTCACTATACAAACAACTGAGATTCATTACCAGAAGAAAACACAAATTGT TACCGATGATGATGTTATTGTCCCTAAGGAGCGACAAGATGTTGAAGCAG GAATAGAACTTGACGAAAGCATGTTTGATGGATTAGATGAAGAAGGACTA GAAGCTAACGAGGTGGTCGCCCCGACTAAAATCACATATCCGACAGTCAC GTTAAAACGGCAAATGAGTAAAGATGCGGCTCTAGTATCGACGACAATTG AAGAATCTCAACCGCAGAAGAAGCAATCCGTCTCGATCCGCATCGGCGGT GGAGCATCTCTCAAAAGAGAAGACTCACAGTCCAAACCGATTAAAATCTC AGTACGCACTAAACCCGTCTCACAGTCATCTGCTACCCAAGAAGATGTTA TTACCCCCGTCTTAGCTCCTTCCGACGAAACCACGCCCTCCTTTGATGGT TTAGACAGTGAAAGAGCATCCACTATTAGCAATGAAAGTCATAATTTTGA TAGCGTTGGACAACTGCGTTTACAAAGCGTCCAGTTTACAGAGGAGGAAA TTAAGAGTATTGAACATAAAGTAAATTCGTTATCTCAAAATAAAGATACT ATTGAAGAGGCTGACGAACTAAATACAAGTCATGATTCGGTTGAGAAATA TGCTGATGAGACATCAAACCATGTGCTGCAAGACGCTTACGAAGGAATAG AAGAGATTTCAAAGACAGTGAATTTGAATAAGAGTAACGTCGATGGTGAG GCTATTTCACCTGTTACAGAAGAGGGTCTAGAGGCGCACCCTATTGATGC TAGTTCTAGCGATGATGAGAAACGAGCTGCTTTTAAAGAAGTTCTTGACC ATGAAATTGAACTTACCAAAGATTTAAAAGCAGAACCAAAACTAAAAACA ACAGAGACAATTACATTGAAAATAAGTGAATCAGAAGTAGAACTATCTTC GACAGTTGAGAATGAATATGATAGCGCATGCGCTGAAATTAATCCACGAG TCGGAGATGAAATAGAAGATCGCGAGAGAAGAATCCAACGTTTATTGACT CTTGGGCAATCAGGAAGTCAAGGTGAACCAGAAGAAGAAGTTTGCACAAT GGATGTTGAAAATGTTGTGGAGTCGATGCCAGATGGCCAACTTGTTGAAA CTTCA

Coding sequence (CDS) from alignment at sc0000267_pilon:184414..185868-

>XLOC_033509 ID=XLOC_033509|Name=XLOC_033509|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2910bp|location=Sequence derived from alignment at sc0000267_pilon:184414..185868- (Clytia hemisphaerica_ch_hm2_pilon)
CTTGAAGATTCACGTCTGCTTGATAAATTATTGGCAATCGAGAAAGAAGG
TGAATTTGACCAAAATAACAATACATCTGTCGATGAACATGGCAACATTC
AACAGATGACCAAAATAATCTCCAATCAAACAATCGAACATGTTGAGATC
AGACAAATGGCGAAAGCCATATCAAACCAATCTGTAGATCGCCAAAAATC
GCCAGTAAACGATGAAGCAGTGATTCAAATCCATCACCAAGAAGATGTTG
AATCCGCATTGGATTTTCAGGCTCTTGAAGAATCGTTCGAAAAGGTGGGT
GTCACTATACAAACAACTGAGATTCATTACCAGAAGAAAACACAAATTGT
TACCGATGATGATGTTATTGTCCCTAAGGAGCGACAAGATGTTGAAGCAG
GAATAGAACTTGACGAAAGCATGTTTGATGGATTAGATGAAGAAGGACTA
GAAGCTAACGAGGTGGTCGCCCCGACTAAAATCACATATCCGACAGTCAC
GTTAAAACGGCAAATGAGTAAAGATGCGGCTCTAGTATCGACGACAATTG
AAGAATCTCAACCGCAGAAGAAGCAATCCGTCTCGATCCGCATCGGCGGT
GGAGCATCTCTCAAAAGAGAAGACTCACAGTCCAAACCGATTAAAATCTC
AGTACGCACTAAACCCGTCTCACAGTCATCTGCTACCCAAGAAGATGTTA
TTACCCCCGTCTTAGCTCCTTCCGACGAAACCACGCCCTCCTTTGATGGT
TTAGACAGTGAAAGAGCATCCACTATTAGCAATGAAAGTCATAATTTTGA
TAGCGTTGGACAACTGCGTTTACAAAGCGTCCAGTTTACAGAGGAGGAAA
TTAAGAGTATTGAACATAAAGTAAATTCGTTATCTCAAAATAAAGATACT
ATTGAAGAGGCTGACGAACTAAATACAAGTCATGATTCGGTTGAGAAATA
TGCTGATGAGACATCAAACCATGTGCTGCAAGACGCTTACGAAGGAATAG
AAGAGATTTCAAAGACAGTGAATTTGAATAAGAGTAACGTCGATGGTGAG
GCTATTTCACCTGTTACAGAAGAGGGTCTAGAGGCGCACCCTATTGATGC
TAGTTCTAGCGATGATGAGAAACGAGCTGCTTTTAAAGAAGTTCTTGACC
ATGAAATTGAACTTACCAAAGATTTAAAAGCAGAACCAAAACTAAAAACA
ACAGAGACAATTACATTGAAAATAAGTGAATCAGAAGTAGAACTATCTTC
GACAGTTGAGAATGAATATGATAGCGCATGCGCTGAAATTAATCCACGAG
TCGGAGATGAAATAGAAGATCGCGAGAGAAGAATCCAACGTTTATTGACT
CTTGGGCAATCAGGAAGTCAAGGTGAACCAGAAGAAGAAGTTTGCACAAT
GGATGTTGAAAATGTTGTGGAGTCGATGCCAGATGGCCAACTTGTTGAAA
CTTCACTTGAAGATTCACGTCTGCTTGATAAATTATTGGCAATCGAGAAA
GAAGGTGAATTTGACCAAAATAACAATACATCTGTCGATGAACATGGCAA
CATTCAACAGATGACCAAAATAATCTCCAATCAAACAATCGAACATGTTG
AGATCAGACAAATGGCGAAAGCCATATCAAACCAATCTGTAGATCGCCAA
AAATCGCCAGTAAACGATGAAGCAGTGATTCAAATCCATCACCAAGAAGA
TGTTGAATCCGCATTGGATTTTCAGGCTCTTGAAGAATCGTTCGAAAAGG
TGGGTGTCACTATACAAACAACTGAGATTCATTACCAGAAGAAAACACAA
ATTGTTACCGATGATGATGTTATTGTCCCTAAGGAGCGACAAGATGTTGA
AGCAGGAATAGAACTTGACGAAAGCATGTTTGATGGATTAGATGAAGAAG
GACTAGAAGCTAACGAGGTGGTCGCCCCGACTAAAATCACATATCCGACA
GTCACGTTAAAACGGCAAATGAGTAAAGATGCGGCTCTAGTATCGACGAC
AATTGAAGAATCTCAACCGCAGAAGAAGCAATCCGTCTCGATCCGCATCG
GCGGTGGAGCATCTCTCAAAAGAGAAGACTCACAGTCCAAACCGATTAAA
ATCTCAGTACGCACTAAACCCGTCTCACAGTCATCTGCTACCCAAGAAGA
TGTTATTACCCCCGTCTTAGCTCCTTCCGACGAAACCACGCCCTCCTTTG
ATGGTTTAGACAGTGAAAGAGCATCCACTATTAGCAATGAAAGTCATAAT
TTTGATAGCGTTGGACAACTGCGTTTACAAAGCGTCCAGTTTACAGAGGA
GGAAATTAAGAGTATTGAACATAAAGTAAATTCGTTATCTCAAAATAAAG
ATACTATTGAAGAGGCTGACGAACTAAATACAAGTCATGATTCGGTTGAG
AAATATGCTGATGAGACATCAAACCATGTGCTGCAAGACGCTTACGAAGG
AATAGAAGAGATTTCAAAGACAGTGAATTTGAATAAGAGTAACGTCGATG
GTGAGGCTATTTCACCTGTTACAGAAGAGGGTCTAGAGGCGCACCCTATT
GATGCTAGTTCTAGCGATGATGAGAAACGAGCTGCTTTTAAAGAAGTTCT
TGACCATGAAATTGAACTTACCAAAGATTTAAAAGCAGAACCAAAACTAA
AAACAACAGAGACAATTACATTGAAAATAAGTGAATCAGAAGTAGAACTA
TCTTCGACAGTTGAGAATGAATATGATAGCGCATGCGCTGAAATTAATCC
ACGAGTCGGAGATGAAATAGAAGATCGCGAGAGAAGAATCCAACGTTTAT
TGACTCTTGGGCAATCAGGAAGTCAAGGTGAACCAGAAGAAGAAGTTTGC
ACAATGGATGTTGAAAATGTTGTGGAGTCGATGCCAGATGGCCAACTTGT
TGAAACTTCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_033509XLOC_033509-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000267_pilongenomesc0000267_pilon:184414..185868 -
Properties
Property NameValue
Aaloc1-1455:1456