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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000311_pilon:91788..95408+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033494 ID=XLOC_033494|Name=XLOC_033494|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3621bp|location=Sequence derived from alignment at sc0000311_pilon:91788..95408+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCAATCCAAAATTCTTTGATCATGTGAGTAAattttcgtgattt
gattttgattttgttgccttttggtgaagcgttttatacttttATAAATG
TTTTATACAGTTTTCAAATGGACAAAATTGTCAAGATTACTTTCTAAGGA
GTAGCAGCTTGGTGGTCATTTGTTTGTTTCCTTTAATgacgacaaaaaaa
acacaaaaaatgcgTTGCAGCCTATACACAAGAGCGCCGATAGACAGGGC
TTACGACTTTTTGCttctattttcatttcaatgtgGTCGAATTATTTGAA
ATTCACCGCGCTGTTAATTGATCAGAACGGAATCTATGCGCCAATAGAAT
TTATGAGTAAACAACATTTTACTTTGCTGATCGCTTTGCCAACCAATTAA
GGCTAGAATTAATTGGATAAAAATAGATTTGCGGTATCCGTTCTTTTAAA
TGCCAGTCATGAGAAAATGGTAATCACATACAGCAAGGTCGTGGTGAGGA
GTAGTCACACACTTAACAAAGTAACATGgagtttcttttcctttttagcT
TGGTCTGTATTGCTGGGATTGTCTCAGGAGGATCACCGCCAAGCTCTTTC
AACGTAAGTCAATGATTTCATCTTCACTCATAAGCAAAATCCTGTTAGCG
AGCGTGTAGAATATTCAAGAATTGGATTAAAGAGAAGCAAGTTTGAGCAA
TTCCCGAGTGGTTTTAAAGCTAATTGGAATTATTATCGCCttcattcaag
attttttcttttgagttttgagAAGGCGGAGTTGACAAAAATGTTCGGAA
GAAAATGTCTTTCAACAATTTGTCAAGAATTTCGTGCTTTTTCTGACATC
ATGACATGTAAATTGGAAAGAATGCGAAGCGCTTTTGAATGCGTTATTTT
TCCCACTTATATTTTGTGAATATAGGGGTTGGATTTAATTAAAGAAACTT
TCTGATACCTTGTGACATTTTCAACACCATGTCATTTctgtaaataatat
ttttgtcgGCTCGTATTCTGCCATATAATCGCGTGTCATATTAGACGAAA
TTGTTCAGGCAATTTACTTTCCCGAATTTAATTGATTTTCACACTTTTAT
GGATTCACAGAAAAAGccgaattcaaaattcaaatcactCAAAGGGATTT
GGCTGGACAACATCAGGAACAAAAACCCGACAAATGTGCCGCTCGAGCAT
CAAACAAGAAGTGACGCAATGCAATTGTATTCTATTCGATCCAAACAAAT
CGTCAAAGTTAAAGAAGTCAGCGAAAAAGCCTGGGAACAACCTAACTATG
AGTTGACCATGACACCAAAAAGTCGCAGCAGAAGAGGTAATTATATTCTC
GCGTGTTTTGGCAGCAGACCTCCAAAATGTCCCTGCAActtaaccaaaac
aaaatttttcctaAATTACTAAGGAGCTATTAGGCAAGTTTAATGACCAT
AATTATCCCTCCCTCAAAGCATTGTGTTTGTTATTTTGGAAAGTTTCTGC
TGGCGTAATAGGAAGTCGTTGAGGTTTGACGTGTGCCATGATTACTCTAT
TCTTTGCTTGCTTGTGGAAGAATTTGAAAGAGAATTAAAacacaaaagaa
acaaaagaaatttcgtCGAAAGCTTCCTTTCTTTAACTGCGTTGGATGAG
CATCATTTTCATATGGTCCTTGACAATTCCTGACCTTTCTTTGGGTCCTT
ATGCACGGAAACTCATCAGTTattcttgttttgaaaaaaaaactgttcaA
ATGACGTTCGTTTCCTATGACAAAGTCACACCTACATATTGAACATTTTA
ATTTTGTGctcaatttgttttgaaattcaaccaaataaaaaaaatattga
gcaAAACTATCAGTTTTTAAGATAACAGCGATGAAAACTTAAAATCTCAA
TTGACATATTGACTCGaaaaaaaTATCTTAGTAGGTTGACGCACCATGTC
ACTTGTACAAAACACAGGAAATATGCAAAATTGGGAAAAGGGGTCTCTTT
TCCTTAGTATTGTTGTAATCCATTTAGTTGACGAAACAATAGATCTTTTC
CTTGCTTTTTCAATTAAGCGATGATTAATTCTGATTTAATAATGTCATAT
TTTCCATCACAGCTCGCCTATTGTGCGGTCTATtctatttttttagatat
tttcttcagaaaaaagttaaattaCTTTCCCAAGCGTAACATTCATTTAA
GACGTGAAGTTTCCGTCTTATTGTAACTATTAAAAAGAGAACAGAGATTT
AAGAAGCACAGTATGGCAACCACACCTAAGCTCTTTACAGTCTTATTCTA
TTGTTACAAACACTTCAGGAAAATAAAATCGCAAAGTTTAAATCGTAAAT
TTAATTGCAACAATCACAATTAGAAATCATCCCTGTCTTTTCCTAACCTT
GTTAAAGAGCGCGTGTCTAGACTTGGTACCTTTTTACATTAATTTGACTA
GATAATATCCTGAACAAGTATTGAttgaaatttcctttttctCGTCTTTT
TACAGATAATAAATTTGTTACCGAGACTGTTTCGTACCAACGCTTAAAGA
TTCGATCGGCTGACAACCAAAAATACCTTTGTGCAAGAACTAATGGAGAA
ATTGTCTTCAAGGTAAGGACTTTGAGTTTAGAAGCACGCTTGTTTATTTa
tcatactcatcatcatcattaattaatccattcattcacacattcattca
tacattcatttattctaacatcCAATCGCATCGACATCGACTGTCTCCTT
GGAACTCTGAAATCCATCTTTACCTTTTCACTTCTTTTCATACTGGACCC
TCTCTCAATCATTAAATTATATTGACActgaaacactttttcttaCACCT
CACTCCATGCTTCATTCAGTTAGTCAGAAAAGTCAGTATTCTACAAGTTA
GCTATACACTATACTGTATTCTTTTGTACTTAAATGTTTGCCATGCACGT
TACTCACTTTCCTGCACGCTATTCACTTCGTAGGACACAGCAGATAAGGA
AGAGAAAGTAGCATCAGTACCAGATGGCCTTCGAGAATATTCATCGGTAT
GTAGCTCTCTAGCCAAAATCTATCGCTTTCAATTATCCTGtctttttcgt
caaaattttgataatcgAACCTTGTGAGCTACTTCAATGAATAGTCTCTG
GCACCGTTTCAACTTTATAGTCATACGGCCAGTCATTTTCAAACTTTCGT
TTCCTATCTTTAGAACAAAGCGGACAAGAAGAACAAGCCACGAAAGAGAT
GTCTGTTTCATTGGGAATTCACCAAGCAAATGCATATCCAACTCTCTTTG
GAAGCTGGTGATAAGAAGAGATATTACTTGAGTGTGAAGGATAATCTCAT
CAAGCTacgagaaaaagaagaaacaacaGAAATCGAGCGATCGTTTATCT
GGCTCCCAACGAAACCATTAAAAGGACAAGGTACACGACTTCCAATGTCA
GGGAACGAGCGTCGAAGCAGGACATTTGACTTTGATCTTGATGCTGTCTT
TGGAAAAATGTTCCCTGAAGAAATCCTTAGAGAAAAAGACCGACAAATCG
AGCTTTTACTGGAAGAAGTTAGAAACTTGAAGGGAAAAGCATCAGAATCT
GATTGCGATAAACGAAAATGA Coding sequence (CDS) from alignment at sc0000311_pilon:91788..95408+ >XLOC_033494 ID=XLOC_033494|Name=XLOC_033494|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1776bp|location=Sequence derived from alignment at sc0000311_pilon:91788..95408+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCAATCCAAAATTCTTTGATCATATGGCTTCAATCCAAAATTCT
TTGATCATcTTGGTCTGTATTGCTGGGATTGTCTCAGGAGGATCACCGCC
AAGCTCTTTCAACcTTGGTCTGTATTGCTGGGATTGTCTCAGGAGGATCA
CCGCCAAGCTCTTTCAACAAAAAGccgaattcaaaattcaaatcactCAA
AGGGATTTGGCTGGACAACATCAGGAACAAAAACCCGACAAATGTGCCGC
TCGAGCATCAAACAAGAAGTGACGCAATGCAATTGTATTCTATTCGATCC
AAACAAATCGTCAAAGTTAAAGAAGTCAGCGAAAAAGCCTGGGAACAACC
TAACTATGAGTTGACCATGACACCAAAAAGTCGCAGCAGAAGAGAAAAAG
ccgaattcaaaattcaaatcactCAAAGGGATTTGGCTGGACAACATCAG
GAACAAAAACCCGACAAATGTGCCGCTCGAGCATCAAACAAGAAGTGACG
CAATGCAATTGTATTCTATTCGATCCAAACAAATCGTCAAAGTTAAAGAA
GTCAGCGAAAAAGCCTGGGAACAACCTAACTATGAGTTGACCATGACACC
AAAAAGTCGCAGCAGAAGAGATAATAAATTTGTTACCGAGACTGTTTCGT
ACCAACGCTTAAAGATTCGATCGGCTGACAACCAAAAATACCTTTGTGCA
AGAACTAATGGAGAAATTGTCTTCAAGATAATAAATTTGTTACCGAGACT
GTTTCGTACCAACGCTTAAAGATTCGATCGGCTGACAACCAAAAATACCT
TTGTGCAAGAACTAATGGAGAAATTGTCTTCAAGGACACAGCAGATAAGG
AAGAGAAAGTAGCATCAGTACCAGATGGCCTTCGAGAATATTCATCGGAC
ACAGCAGATAAGGAAGAGAAAGTAGCATCAGTACCAGATGGCCTTCGAGA
ATATTCATCGAACAAAGCGGACAAGAAGAACAAGCCACGAAAGAGATGTC
TGTTTCATTGGGAATTCACCAAGCAAATGCATATCCAACTCTCTTTGGAA
GCTGGTGATAAGAAGAGATATTACTTGAGTGTGAAGGATAATCTCATCAA
GCTacgagaaaaagaagaaacaacaGAAATCGAGCGATCGTTTATCTGGC
TCCCAACGAAACCATTAAAAGGACAAGGTACACGACTTCCAATGTCAGGG
AACGAGCGTCGAAGCAGGACATTTGACTTTGATCTTGATGCTGTCTTTGG
AAAAATGTTCCCTGAAGAAATCCTTAGAGAAAAAGACCGACAAATCGAGC
TTTTACTGGAAGAAGTTAGAAACTTGAAGGGAAAAGCATCAGAATCTGAT
TGCGATAAACGAAAATGAAACAAAGCGGACAAGAAGAACAAGCCACGAAA
GAGATGTCTGTTTCATTGGGAATTCACCAAGCAAATGCATATCCAACTCT
CTTTGGAAGCTGGTGATAAGAAGAGATATTACTTGAGTGTGAAGGATAAT
CTCATCAAGCTacgagaaaaagaagaaacaacaGAAATCGAGCGATCGTT
TATCTGGCTCCCAACGAAACCATTAAAAGGACAAGGTACACGACTTCCAA
TGTCAGGGAACGAGCGTCGAAGCAGGACATTTGACTTTGATCTTGATGCT
GTCTTTGGAAAAATGTTCCCTGAAGAAATCCTTAGAGAAAAAGACCGACA
AATCGAGCTTTTACTGGAAGAAGTTAGAAACTTGAAGGGAAAAGCATCAG
AATCTGATTGCGATAAACGAAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000311_pilon | genome | sc0000311_pilon:91788..95408 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 481-888:3214 |
| Aaloc | 418-480:2984 |
| Aaloc | 313-417:2508 |
| Aaloc | 85-309:1111 |
| Aaloc | 31-84:550 |
| Aaloc | 1-27:1 |
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