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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000311_pilon:115333..117636- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033490 ID=XLOC_033490|Name=XLOC_033490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2304bp|location=Sequence derived from alignment at sc0000311_pilon:115333..117636- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGCTTCGATACTAGTGGTATTGCTGATTTCGATCATTGCTTGCCA
ATTGGTGGATGCAAAGAAGGAGAAGAGGAAGCCCCAAAATGATAAAGAAA
AAAAACTCTTCAAAGAGCAAATTGAAAAACGCCAGAAAGATGCAAAGAAG
AAATTTAAAGATATGAAGAATTCCGATCAGGTGGACCGTATAATGGGCAA
TTCTATGATGAGAGCAGACAAAAAAGGAGGAAAACTAGCTATTCAAAGAA
AAGGACAATATTTCGTTATGAAAATCAAAGAAATTGTAGCAAGACATTCA
AATGAAACCGAGGTACAGTTAACACAGATTTTTAGTCTTATAAAATAAGC
ATATTGAAGAAATTTTCCGGGCCTAAATGTCGCCTTCTACCAAATAGCTT
TGAATTTACGTCACACTTTCAGATAGAATCTAATTGATTTAGTCCCATGA
AAATTTCACGGAGCTAGCTTGTTACAGTACCCTAAACTCTATAGGTGTCA
AGAAGCAGATTCACGTGTTGTTAGTGAGATCTGAAGCTATCAACGGATGG
TCTGTTTTAACTCAATTAACTGAAACTCTTGGAAAACACTCCAATGCTTT
ATTTTAACTTTGTGGTATCCCGTGAAAGATTAGAAAGTGCAAAAGATCTG
GTTTCTATTTCCTATGGTTTTTAAAAATTTTGCTTTTCTTCTTTCACGTC
ACATCAGATCACAAAGACAAAGCTAAAAGATGTCAAGTTCACAATCACTG
GAGATAAGAATGATACGTCCACTTATGGTGTCCAAGCCGCTTATGTTCAA
ATGGTCGGTCGATTACCAAATGGTGGGAATGTCACTCTCCAGCTATTCAT
GTTCAAAGATGCTGGTAATGTCACAGGTGAAGATGGAAACGTTTATGAAC
TTGTTGAAGGAGGAACCAAAGCGAATTTAAGAGTGTAAGTAGCTATACTG
ATAGAAAGCATAATATTCTTTATAGCGTGGCATTTTCAAGTCGTGCATAA
GGCCTATGATAACCAATAAGGTATAGTTGAAGACTACATTCGAATCCTCT
ATGTAGATTTAAAGCCACTTATTTTCTACATAAGTTGTGCGCCCTGCGTG
TTTTTCATACAAACGCTAGATTAGATTATTTCCATCTCCCTGGGTTTAAA
AATTCTCTTAGTTTCTCCATTACCATATGACTCACAATTCTAACTTTACA
ATTAAAGGCCTTCCCTTATCCTGAGAACCCATCACCCTGAATTAATATAA
TTGGGTCTTCCACTTTCACACCTTTACCAAAGTTGAGCGCAATGCTTACC
TGTAAGTTACAGGTTTTACATTGTCCGTAAAAGAATTGAGCTATTTGAAA
ATTTTGAAAAAATTTATTCACTATGGTCATAGAGCCCTTAAACATGAGAA
CTTTTTTTATCGACGCTTCCTCTCATTCTTCTCGAACGTCCGAAACCTCC
CCTTTGCTCTTACTCAAAGTATATTTTAGGTATCATTTCTTTACATCTCT
TTCAACCCTATCATTCTTTAGAGAGTGGCCAAACGAAGCTGATCATCTGG
ACTTGGTGATTGCTGTCCAATGTGGGTTTGATGTGAAAAAAGCCAAGAAA
GCTATGAAGGCTATGAAAACACGTGGACGCAAAGGAATGAAAAAGGCGAT
GAACAGACGTAATCCCGAAACATTCTCCGTCTGCTCCAATGCCCGAATGA
CCTTTTCACCAGCGGTAAATCATAATGAAATTTCTTGATACTTAATATTC
TCATTTCATAAGTAGTTTTAAGTTTGATGAGTATTTTGCTCCTAAACTCC
AGAACGTCATGTTGCTAGTACAAAGAAGGCCTCTAAGCTCTGATGATAAG
AAATAAGAAAGGTTAAATATCTTATTGGACAGATAATAGATACGAGTCCT
TCTATGATTGTTTGATTTTCACTTTTTAGTCTTAAGTAAAGCTAGCTAAA
ATGAAAATGTAAAGAACTTCTTACGACTCTAGTTATTCATTAAGATATCA
ACGCTTGCATTTTATGCTTCATCGATTTCAGTACAATACCAGTATGAGCG
ACAACAGCACTAGTATGGACTACGACATGCCAACTGGTTATCCTAAATCA
AAAGAGCTATCCGGTGAAGGCGAATCCGAAATCGTTCTTCGATTTAACGG
AACCAGAATTTTTTACGATCCAACTGTAGAAACAGGTGAAGATATTGGCG
AAGAAGCCGAATTTGAAGCTTCCAACAACGCCATCTCTCTACACACGCCT
AACCTCATCATTGCGGTAGTATTTTCGATGATTTTTTTAAAACTTTTATT
GTAA Coding sequence (CDS) from alignment at sc0000311_pilon:115333..117636- >XLOC_033490 ID=XLOC_033490|Name=XLOC_033490|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2010bp|location=Sequence derived from alignment at sc0000311_pilon:115333..117636- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGCTTCGATACTAGTGGTATTGCTGATTTCGATCATTGCTTGCCA
ATTGGTGGATGCAAAGAAGGAGAAGAGGAAGCCCCAAAATGATAAAGAAA
AAAAACTCTTCAAAGAGCAAATTGAAAAACGCCAGAAAGATGCAAAGAAG
AAATTTAAAGATATGAAGAATTCCGATCAGGTGGACCGTATAATGGGCAA
TTCTATGATGAGAGCAGACAAAAAAGGAGGAAAACTAGCTATTCAAAGAA
AAGGACAATATTTCGTTATGAAAATCAAAGAAATTGTAGCAAGACATTCA
AATGAAACCGAGATGAAAGCTTCGATACTAGTGGTATTGCTGATTTCGAT
CATTGCTTGCCAATTGGTGGATGCAAAGAAGGAGAAGAGGAAGCCCCAAA
ATGATAAAGAAAAAAAACTCTTCAAAGAGCAAATTGAAAAACGCCAGAAA
GATGCAAAGAAGAAATTTAAAGATATGAAGAATTCCGATCAGGTGGACCG
TATAATGGGCAATTCTATGATGAGAGCAGACAAAAAAGGAGGAAAACTAG
CTATTCAAAGAAAAGGACAATATTTCGTTATGAAAATCAAAGAAATTGTA
GCAAGACATTCAAATGAAACCGAGATCACAAAGACAAAGCTAAAAGATGT
CAAGTTCACAATCACTGGAGATAAGAATGATACGTCCACTTATGGTGTCC
AAGCCGCTTATGTTCAAATGGTCGGTCGATTACCAAATGGTGGGAATGTC
ACTCTCCAGCTATTCATGTTCAAAGATGCTGGTAATGTCACAGGTGAAGA
TGGAAACGTTTATGAACTTGTTGAAGGAGGAACCAAAGCGAATTTAAGAG
TATCACAAAGACAAAGCTAAAAGATGTCAAGTTCACAATCACTGGAGATA
AGAATGATACGTCCACTTATGGTGTCCAAGCCGCTTATGTTCAAATGGTC
GGTCGATTACCAAATGGTGGGAATGTCACTCTCCAGCTATTCATGTTCAA
AGATGCTGGTAATGTCACAGGTGAAGATGGAAACGTTTATGAACTTGTTG
AAGGAGGAACCAAAGCGAATTTAAGAGTAGAGTGGCCAAACGAAGCTGAT
CATCTGGACTTGGTGATTGCTGTCCAATGTGGGTTTGATGTGAAAAAAGC
CAAGAAAGCTATGAAGGCTATGAAAACACGTGGACGCAAAGGAATGAAAA
AGGCGATGAACAGACGTAATCCCGAAACATTCTCCGTCTGCTCCAATGCC
CGAATGACCTTTTCACCAGCGAGAGTGGCCAAACGAAGCTGATCATCTGG
ACTTGGTGATTGCTGTCCAATGTGGGTTTGATGTGAAAAAAGCCAAGAAA
GCTATGAAGGCTATGAAAACACGTGGACGCAAAGGAATGAAAAAGGCGAT
GAACAGACGTAATCCCGAAACATTCTCCGTCTGCTCCAATGCCCGAATGA
CCTTTTCACCAGCGTACAATACCAGTATGAGCGACAACAGCACTAGTATG
GACTACGACATGCCAACTGGTTATCCTAAATCAAAAGAGCTATCCGGTGA
AGGCGAATCCGAAATCGTTCTTCGATTTAACGGAACCAGAATTTTTTACG
ATCCAACTGTAGAAACAGGTGAAGATATTGGCGAAGAAGCCGAATTTGAA
GCTTCCAACAACGCCATCTCTCTACACACGCCTAACCTCATCATTGCGGT
AGTATTTTCGATGATTTTTTTAAAACTTTTATTGTAATACAATACCAGTA
TGAGCGACAACAGCACTAGTATGGACTACGACATGCCAACTGGTTATCCT
AAATCAAAAGAGCTATCCGGTGAAGGCGAATCCGAAATCGTTCTTCGATT
TAACGGAACCAGAATTTTTTACGATCCAACTGTAGAAACAGGTGAAGATA
TTGGCGAAGAAGCCGAATTTGAAGCTTCCAACAACGCCATCTCTCTACAC
ACGCCTAACCTCATCATTGCGGTAGTATTTTCGATGATTTTTTTAAAACT
TTTATTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000311_pilon | genome | sc0000311_pilon:115333..117636 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 733-1005:274 |
| Aaloc | 541-732:783 |
| Aaloc | 313-537:1598 |
| Aaloc | 1-312:2305 |
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