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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000152_pilon:527036..530377- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033275 ID=XLOC_033275|Name=XLOC_033275|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3342bp|location=Sequence derived from alignment at sc0000152_pilon:527036..530377- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTGGGAACACTATTCATCCTATTGGTGTCATTTTTGTTTTATTCTTG
GCTTCGCATGAAATGGAGTGACAAAGACTGGATTTATTACCCACAAGGCG
CACTACCTGTAATTGGTCATTTATTGTTGCTACAAGATCGAAAGAAATAT
CACAAGCTCAAAGACACTTGGTATCGCAAATCTAAAGGGACGTACGGTGT
TTATTTTCTCTTTCAGAGAATAATACTCTCTATTGATTTGAAAGTGTGGG
AAGATATGCTTTCTAGTCAAAAGTATCTAGATAAAGGACAAGGGTATTGG
ATTCTTGAGAAATTCCTTGGTAATGGCTTAGTGACAAGCACTGGAGATTT
ATGGAAAAAGCGTCGACGAATGATTATCCCTGCTTTTCATTTTGAAATTT
TGAACGAGTTTGTTTCCATCATGGAAAATCGGACTTTGGAATTGATTGAA
ATGTTGAAAAAGTTTCACGAGAAAGATGAATCTTTTAACGCTTTTGATAT
CACTAAACCGTTTTCGTTGAGTATTATTTGTGAAACTTCGATGGGGATCG
ATTTAACCATTGAAGAAACCTCCGATGGTCGATTTAAGAAACTGTATGAG
CGGCTATTCAGAATTCTATTCAAGAGATGTTTAAATCCTTTGATGAAAAA
TGATTGGATATATTCTCTTACAAGCAATGGGAAAGCTTTTAACGCGACTT
ATGCTGACATTGCATCCTTCGTTAAAGAAATTATTGAAAAGCGAATCGAA
GTTCGACGAAATCCTGACAAAGCTGGAGAAATGACACACACTAAACGTAG
GATTTTTATCGATTCTTTGTTAAATTCGTATGAGAAAGGTGACATTGATG
TGGATGGGATCCTTAACGAAGTCAATACCTTTGTCAATGCAGGCTACGAG
ACAACCTCGACATCTCTTGCGTGGACTTTGTACTGTCTGGGAAGGAACCA
GAGAGTACAAGAAAAGCTCTACAATGAAATAATCCGTTTTGAGAAAGATA
AAAAATTGCAAATGGAAGACTTTAAGGAATTACCTTATCTTGATCTCGTA
ATTAAAGAATCGTTACGTTTACATCCTGCGGTTCCACGTTTCAGCCGACG
CATTCCCGATGGTACTCTTCTCGGAGGAAAAGTTTTCCCTTATTGTACGC
TAATAATTGATCTTATTGAAATGAATCGAAATCCTGAAGTATGGGAAGAT
CCACTAACTTTCAATCCTGAACGGTTTGAAGATTTTAAATTGAAAGGCAA
TAAACGAAACCCATTTCTTTTCGTCCCTTTCTCAGCTGGTCCTCGTAATT
GCATCGGACAAAAATTTGCACTCAGTGAGTTGAAAGCAGCGGTCTTTCAT
TTGGTGAAACATTTAGAGTTCATCTCTCTTCAAGATGAAAGTGAATTGAT
AGAGACATTGGACTTGATTCATGGCTGTGAGAACGGGCCAATGATGAAAG
TGAAACCTCGAAAGTAGATAACCTTACCAAGATTTTAATAAAATTTAATT
TTTGTTTTAATAGAACTAACCTAACAAAGAAAATTAAACTACTAATTTGG
TGAATTGATTTCTAAAGTATTTTTCTTTGGCTGACATGTCCTATCATATA
GCTGGAAACACTGGAAATTACCACCGAAAGTTTCTGTCTATTGATTTCAG
TCTTAGCAAACACTGCTCTTTTACAACTCGATTGTTCCAAAAGTTGGTAG
TTATTTTAATTGATCTTCAAGGTCCTGAATTTTCTGCATATTTAACAAGG
ATACGTATTACGGAGAGCTTTTCTGTAAGGCTGTTTTCTCAATTTTAGGG
AAAAAATGACGAAAATATAAAATTACAAGGTGAAAAGGAGATAACCCCAG
GTTAAACATAATAAAAATGTTTTTGACAATTCTCGGATCGATCTTTGTCA
TATTGGCGTCATATTTGGTTTTTTCTTGGCTTCGTGTGAAATGGACTGAC
AAAGGTTGGATTTACTATCTTCCTGGTGGGCTACCTTTGATTGGACATGT
CTTTGTTTTACAAAATCGTAAGAAATATCATGAGCTCAAGGATGGTTGGT
ATCGAGAATCTAAAGGGACTTACGGCGTTTATTTATTACTAGATCGTATA
TTGTTATCAATGGATTTAAAAGTCTGGGAAGACTTGTTATCCAGTCAAAA
GTATTTAGATAAAGGACAAGGGTATTGGATTCTTGAGAAATTCCTTGGTA
ATGGTTTAGTGACAAGCACTGGAGATTTATGGAAAAAGCGTCGACGAATG
ATTACGCCTGCTTTTCATTTTGAAATTTTGAACGAGTTCGTTTCCATCAT
GGAAAATCGGACTTTGGAATTGATTGAAATGTTGAAAAAGTTTCACGAGA
AAGATGAATCTTTTAACGCTTTTGATATCACTAAACCGTTTTCGTTGAGT
ATTATTTGTGAAACTTCGATGGGGATTAATCTCTCAATCGAGGAAACCTC
AAGTGGAAGATTCAAGAAAATGTACGAAAGACTCATTCATGTTTTATTTC
GACGACAACTTAATCCTTTGATGAAAAACGATTGGCTTTATTCGATGACA
GCTGATGGCAAAGCTTTCTATGCTGCGTTTAAAGAAATTACTGCATTTGT
TAAAGAAGTCATTGAAAAACGGATCGAAGTTCAACGGAATCCTGACAAAG
CTGAAGAGATGAAACATACTAAACGAAGGATTTTCATCGATACTTTGTTA
GATTCTTACGAAAAAGGTGATATTGATGTCGATGGGATCCTTAACGAAGT
CAATACCTTTGTCAATGCCGGATACGAGACAACCTCGACATCACTTGCGT
GGACTTTGTACTGTCTGGGAAGGAACCAGAGAGTACAAGAAAAGCTCTAC
AATGAAATAATCCGTTTTGAGAAAGATAAAAAATTGCAAATGGAAGATTT
TAAAGAATTGCCTTACCTGGATTTAGTTGTGAAAGAATCATTACGTCTGC
ATCCAGCAATCACAAGATTCGGTCGACAAATAGCAGATGGGACTGTGCTT
GGTGGTAAAGTTTTCCCCGACTGTACTTTGGTTATTGATATCGTTGCTAT
GAATCGGAATCCTGATGTCTGGGAGGATCCACTAACTTTCAATCCTGAAC
GGTTTGAAACCTTTGACAAGCAAAGCAAACGAAATCCGTTCCTCTACGTT
CCTTTTTCAGCTGGTCCTCGTAATTGCATCGGTCAAAAATTTGCACTCAG
TGAGTTGAAAGCAGCGGTCTTCCATTTGGTGAAACATTTAGAGTTGATTT
CACTTCAAGATGAAAGTGAATTGAAGGAAACTTTTGATTTGACTCATGGC
TGTGAGAACGGTCCAATGCTTAAGATTAAACCTAGGAATTAA Coding sequence (CDS) from alignment at sc0000152_pilon:527036..530377- >XLOC_033275 ID=XLOC_033275|Name=XLOC_033275|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2928bp|location=Sequence derived from alignment at sc0000152_pilon:527036..530377- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTGGGAACACTATTCATCCTATTGGTGTCATTTTTGTTTTATTCTTG
GCTTCGCATGAAATGGAGTGACAAAGACTGGATTTATTACCCACAAGGCG
CACTACCTGTAATTGGTCATTTATTGTTGCTACAAGATCGAAAGAAATAT
CACAAGCTCAAAGACACTTGGTATCGCAAATCTAAAGGGACGTACGGTGT
TTATTTTCTCTTTCAGAGAATAATACTCTCTATTGATTTGAAAATTTTGG
GAACACTATTCATCCTATTGGTGTCATTTTTGTTTTATTCTTGGCTTCGC
ATGAAATGGAGTGACAAAGACTGGATTTATTACCCACAAGGCGCACTACC
TGTAATTGGTCATTTATTGTTGCTACAAGATCGAAAGAAATATCACAAGC
TCAAAGACACTTGGTATCGCAAATCTAAAGGGACGTACGGTGTTTATTTT
CTCTTTCAGAGAATAATACTCTCTATTGATTTGAAAGTCTGGGAAGACTT
GTTATCCAGTCAAAAGTATTTAGATAAAGGACAAGGGTATTGGATTCTTG
AGAAATTCCTTGGTAATGGTTTAGTGACAAGCACTGGAGATTTATGGAAA
AAGCGTCGACGAATGATTACGCCTGCTTTTCATTTTGAAATTTTGAACGA
GTTCGTTTCCATCATGGAAAATCGGACTTTGGAATTGATTGAAATGTTGA
AAAAGTTTCACGAGAAAGATGAATCTTTTAACGCTTTTGATATCACTAAA
CCGTTTTCGTTGAGTATTATTTGTGAAACTTCGATGGGGATTAATCTCTC
AATCGAGGAAACCTCAAGTGGAAGATTCAAGAAAATGTACGAAAGACTCA
TTCATGTTTTATTTCGACGACAACTTAATCCTTTGATGAAAAACGATTGG
CTTTATTCGATGACAGCTGATGGCAAAGCTTTCTATGCTGCGTTTAAAGA
AATTACTGCATTTGTTAAAGAAGTCATTGAAAAACGGATCGAAGTTCAAC
GGAATCCTGACAAAGCTGAAGAGATGAAACATACTAAACGAAGGATTTTC
ATCGATACTTTGTTAGATTCTTACGAAAAAGGTGATATTGATGTCGATGG
GATCCTTAACGAAGTCAATACCTTTGTCAATGCCGGATACGAGACAACCT
CGACATCACTTGCGTGGACTTTGTACTGTCTGGGAAGGAACCAGAGAGTA
CAAGAAAAGCTCTACAATGAAATAATCCGTTTTGAGAAAGATAAAAAATT
GCAAATGGAAGATTTTAAAGAATTGCCTTACCTGGATTTAGTTGTGAAAG
AATCATTACGTCTGCATCCAGCAATCACAAGATTCGGTCGACAAATAGCA
GATGGGACTGTGCTTGGTGGTAAAGTTTTCCCCGACTGTACTTTGGTTAT
TGATATCGTTGCTATGAATCGGAATCCTGATGTCTGGGAGGATCCACTAA
CTTTCAATCCTGAACGGTTTGAAACCTTTGACAAGCAAAGCAAACGAAAT
CCGTTCCTCTACGTTCCTTTTTCAGCTGGTCCTCGTAATTGCATCGGTCA
AAAATTTGCACTCAGTGAGTTGAAAGCAGCGGTCTTCCATTTGGTGAAAC
ATTTAGAGTTGATTTCACTTCAAGATGAAAGTGAATTGAAGGAAACTTTT
GATTTGACTCATGGCTGTGAGAACGGTCCAATGCTTAAGATTAAACCTAG
GAATTAAGTCTGGGAAGACTTGTTATCCAGTCAAAAGTATTTAGATAAAG
GACAAGGGTATTGGATTCTTGAGAAATTCCTTGGTAATGGTTTAGTGACA
AGCACTGGAGATTTATGGAAAAAGCGTCGACGAATGATTACGCCTGCTTT
TCATTTTGAAATTTTGAACGAGTTCGTTTCCATCATGGAAAATCGGACTT
TGGAATTGATTGAAATGTTGAAAAAGTTTCACGAGAAAGATGAATCTTTT
AACGCTTTTGATATCACTAAACCGTTTTCGTTGAGTATTATTTGTGAAAC
TTCGATGGGGATTAATCTCTCAATCGAGGAAACCTCAAGTGGAAGATTCA
AGAAAATGTACGAAAGACTCATTCATGTTTTATTTCGACGACAACTTAAT
CCTTTGATGAAAAACGATTGGCTTTATTCGATGACAGCTGATGGCAAAGC
TTTCTATGCTGCGTTTAAAGAAATTACTGCATTTGTTAAAGAAGTCATTG
AAAAACGGATCGAAGTTCAACGGAATCCTGACAAAGCTGAAGAGATGAAA
CATACTAAACGAAGGATTTTCATCGATACTTTGTTAGATTCTTACGAAAA
AGGTGATATTGATGTCGATGGGATCCTTAACGAAGTCAATACCTTTGTCA
ATGCCGGATACGAGACAACCTCGACATCACTTGCGTGGACTTTGTACTGT
CTGGGAAGGAACCAGAGAGTACAAGAAAAGCTCTACAATGAAATAATCCG
TTTTGAGAAAGATAAAAAATTGCAAATGGAAGATTTTAAAGAATTGCCTT
ACCTGGATTTAGTTGTGAAAGAATCATTACGTCTGCATCCAGCAATCACA
AGATTCGGTCGACAAATAGCAGATGGGACTGTGCTTGGTGGTAAAGTTTT
CCCCGACTGTACTTTGGTTATTGATATCGTTGCTATGAATCGGAATCCTG
ATGTCTGGGAGGATCCACTAACTTTCAATCCTGAACGGTTTGAAACCTTT
GACAAGCAAAGCAAACGAAATCCGTTCCTCTACGTTCCTTTTTCAGCTGG
TCCTCGTAATTGCATCGGTCAAAAATTTGCACTCAGTGAGTTGAAAGCAG
CGGTCTTCCATTTGGTGAAACATTTAGAGTTGATTTCACTTCAAGATGAA
AGTGAATTGAAGGAAACTTTTGATTTGACTCATGGCTGTGAGAACGGTCC
AATGCTTAAGATTAAACCTAGGAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000152_pilon | genome | sc0000152_pilon:527036..530377 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 244-1464:1222 |
| Aaloc | 1-243:3343 |
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