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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000069_pilon:1515560..1517864- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033263 ID=XLOC_033263|Name=XLOC_033263|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2305bp|location=Sequence derived from alignment at sc0000069_pilon:1515560..1517864- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAAAGGTGGTTATGATGTTGAATTGGTGAATGGTGAACTGGAGAA
TGATATCACGTGTTCAATCTGTTTGTTCATTTTGAAAGATCCTATGCAAG
CCATAGAATGTGGACATCGATTTTGTAAAACTTGTGTTGCTGGTCTTCAA
AAGGGGTAATGATGACAGCGTAGAATACTAGACTGATATTATTATCGTAA
TTGCAAAGACTTAGAAATATTACATCACTAAAAGAGTTGGTGATCGGATT
TTGGTATTCCCTACGCCATGATGAATCTTATGTATTATTATTGCAAAATA
TCATTAGGGAAGATATTTGATTTGGGGTCATTTTGTGTGATCATTTTGTT
GTTTTTTTATTTAGTGTTAATGGTAGTTATGTTTGCCCAGAAGATCGTGC
TGAAACGGCTGTAAGTTCACAAAGACATATTTTTAACTTAACCTTTAATC
CTATCTTATTACCATGGTGTCTGTGAATTTTTTTTATAAGAATACTTTGG
CTGAGGGTGAGCATTATTCTTATTTTTCTATTACTCAAAACAATACAGTA
GGCCTATTGTTCTAATTGAACCCTGATATTCTTATTCTTATAAAACAGAA
TCGTGTATGAGAAATCTTGAAAGCAGACCGACCAGTTAATTTACCAATTT
TTTCATAAATTTAAATACTACAAACACTTTTCGCAAACCTTTTTCAGTTT
TATCCAGATAAAGGAAGAGGTCGTGAAATTTTGGGTTTTGCAGTCAGATG
CTCAAACAAAATGCTTGGTTGTCCATGGGTGAAAGAATTGCGTGAAGTAG
AGGTAGTAAAAGAATTGCGTGAAGTAGAGGTAGTAAAAGTTACTTTTTTT
GGTCTCTAATTCCTTCCATTGAGCTTTTTTTATCAAAAATATAGTTTTTG
CTTTTTGGAAATTTTTAGGATCACAAAGAACAATGCGACTTCAAAATCGT
TAAATGTGTCGTTGAATCGTGTGCTGAGGAGTTTCAAAGGCGATACGAAG
ATCAGCACTACAAAAAGTGCAAATACAGAATGGTTCAATGCCCATTTTGC
AACGAAGATTATATTTTTGCTTTTGAGGAGGTATACTCTTGTTGATTTAC
CTCAGTTAGGTTGACATGTTTTTGACTACAGTATATCTATTATGTTTATT
GAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGAATGA
ATGAATGAATGAATGAATGAATGAATGAATGAATGAATGGATGAATGAAT
GAATGAATGAATGAATGAATGAATGAATGAATGAATGAAGAATGAATGAA
CTTTTAGGAACACATTGACGATTGTGAAGAATTTTTGGAATGTTGTGATT
ATTGTTCCGATATTGATATCCCAAGATCGAAGGTAATATAATTATTCTGA
CAAATTCATTGGAATTAAGCTTCACTTGTTACTTTGGGGCTGTGGAAATC
TAAAATCGTGAATTAAATACAAAATAGTAAAAATTAAAACACTTTATCAT
TATGTTTAAAGTTTATATCAACTTTAGATGGACATTCACTTGTCAAAAGA
TTGCAAGAAGATCCCGCTTTGTTGTCCATATGAGCCTCTTGGCTGCAAAG
AAAAGGTGAGATTAAACTTCAGGCTACTGTTGTAACTCAATGTCTTGCTT
TCTGTGGACTTCATTCCAACTTTATTATTCAAATTCTGCATTTTTCTTCT
AGATGCTTTTTAGTGATCTTGAAAAACACGAGGTAATATCTACTCAACAC
CACTTGAAACTAGCCATAAACAAAATTACGAACCAACAAGAACAAATTCA
ATTGCTGATGGATAACCAAAATCAATTGTTGGAAAGATTGAGTAAAGTGG
AAGGCAAGTCGGATGCGATTCTTCTAATGAAAGATCAGCATATTTGGAGG
ATACCACGATTTTCTGACGAAATACGAAAAGCCAAAAACCTAGGAAGACA
TCACACACTTTCAAAATTCATTTACACGTCAAAAGGTTACAGATTGGAAT
GTATTTTACAACCTTATCAGCGATTATTTCAATCTGGTACCCTGCTTTCT
TGCAGAACCACTGTAGGAAGTTTTGACGAGTCTTTAACATGGCCTATGAA
CAAATTCATGATCACAAGTTGCATCATTGATCCACAAGGAATAGCGAGAG
ACAAAACCAGTGTTACTACTACAAACAGTCGTGCTTTCAAAAAACCACCA
CACTTGAATCCTGGTGCAACATCATTTTTCATACCAGATGAAAATGTTGA
AAAATACACTTTTATTGGCATTCTTACAATCAAGATTCAGATCGCAGACG
TGTAG Coding sequence (CDS) from alignment at sc0000069_pilon:1515560..1517864- >XLOC_033263 ID=XLOC_033263|Name=XLOC_033263|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2448bp|location=Sequence derived from alignment at sc0000069_pilon:1515560..1517864- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAAAAGGTGGTTATGATGTTGAATTGGTGAATGGTGAACTGGAGAA
TGATATCACGTGTTCAATCTGTTTGTTCATTTTGAAAGATCCTATGCAAG
CCATAGAATGTGGACATCGATTTTGTAAAACTTGTGTTGCTGGTCTTCAA
AAGGGATGACAAAAGGTGGTTATGATGTTGAATTGGTGAATGGTGAACTG
GAGAATGATATCACGTGTTCAATCTGTTTGTTCATTTTGAAAGATCCTAT
GCAAGCCATAGAATGTGGACATCGATTTTGTAAAACTTGTGTTGCTGGTC
TTCAAAAGGGTGTTAATGGTAGTTATGTTTGCCCAGAAGATCGTGCTGAA
ACGGCTTGTTAATGGTAGTTATGTTTGCCCAGAAGATCGTGCTGAAACGG
CTTTTTATCCAGATAAAGGAAGAGGTCGTGAAATTTTGGGTTTTGCAGTC
AGATGCTCAAACAAAATGCTTGGTTGTCCATGGGTGAAAGAATTGCGTGA
AGTAGAGTTTTATCCAGATAAAGGAAGAGGTCGTGAAATTTTGGGTTTTG
CAGTCAGATGCTCAAACAAAATGCTTGGTTGTCCATGGGTGAAAGAATTG
CGTGAAGTAGAGGATCACAAAGAACAATGCGACTTCAAAATCGTTAAATG
TGTCGTTGAATCGTGTGCTGAGGAGTTTCAAAGGCGATACGAAGATCAGC
ACTACAAAAAGTGCAAATACAGAATGGTTCAATGCCCATTTTGCAACGAA
GATTATATTTTTGCTTTTGAGGAGGATCACAAAGAACAATGCGACTTCAA
AATCGTTAAATGTGTCGTTGAATCGTGTGCTGAGGAGTTTCAAAGGCGAT
ACGAAGATCAGCACTACAAAAAGTGCAAATACAGAATGGTTCAATGCCCA
TTTTGCAACGAAGATTATATTTTTGCTTTTGAGGAGGAACACATTGACGA
TTGTGAAGAATTTTTGGAATGTTGTGATTATTGTTCCGATATTGATATCC
CAAGATCGAAGGAACACATTGACGATTGTGAAGAATTTTTGGAATGTTGT
GATTATTGTTCCGATATTGATATCCCAAGATCGAAGATGGACATTCACTT
GTCAAAAGATTGCAAGAAGATCCCGCTTTGTTGTCCATATGAGCCTCTTG
GCTGCAAAGAAAAGATGGACATTCACTTGTCAAAAGATTGCAAGAAGATC
CCGCTTTGTTGTCCATATGAGCCTCTTGGCTGCAAAGAAAAGATGCTTTT
TAGTGATCTTGAAAAACACGAGGTAATATCTACTCAACACCACTTGAAAC
TAGCCATAAACAAAATTACGAACCAACAAGAACAAATTCAATTGCTGATG
GATAACCAAAATCAATTGTTGGAAAGATTGAGTAAAGTGGAAGGCAAGTC
GGATGCGATTCTTCTAATGAAAGATCAGCATATTTGGAGGATACCACGAT
TTTCTGACGAAATACGAAAAGCCAAAAACCTAGGAAGACATCACACACTT
TCAAAATTCATTTACACGTCAAAAGGTTACAGATTGGAATGTATTTTACA
ACCTTATCAGCGATTATTTCAATCTGGTACCCTGCTTTCTTGCAGAACCA
CTGTAGGAAGTTTTGACGAGTCTTTAACATGGCCTATGAACAAATTCATG
ATCACAAGTTGCATCATTGATCCACAAGGAATAGCGAGAGACAAAACCAG
TGTTACTACTACAAACAGTCGTGCTTTCAAAAAACCACCACACTTGAATC
CTGGTGCAACATCATTTTTCATACCAGATGAAAATGTTGAAAAATACACT
TTTATTGGCATTCTTACAATCAAGATTCAGATCGCAGACGTGTAGATGCT
TTTTAGTGATCTTGAAAAACACGAGGTAATATCTACTCAACACCACTTGA
AACTAGCCATAAACAAAATTACGAACCAACAAGAACAAATTCAATTGCTG
ATGGATAACCAAAATCAATTGTTGGAAAGATTGAGTAAAGTGGAAGGCAA
GTCGGATGCGATTCTTCTAATGAAAGATCAGCATATTTGGAGGATACCAC
GATTTTCTGACGAAATACGAAAAGCCAAAAACCTAGGAAGACATCACACA
CTTTCAAAATTCATTTACACGTCAAAAGGTTACAGATTGGAATGTATTTT
ACAACCTTATCAGCGATTATTTCAATCTGGTACCCTGCTTTCTTGCAGAA
CCACTGTAGGAAGTTTTGACGAGTCTTTAACATGGCCTATGAACAAATTC
ATGATCACAAGTTGCATCATTGATCCACAAGGAATAGCGAGAGACAAAAC
CAGTGTTACTACTACAAACAGTCGTGCTTTCAAAAAACCACCACACTTGA
ATCCTGGTGCAACATCATTTTTCATACCAGATGAAAATGTTGAAAAATAC
ACTTTTATTGGCATTCTTACAATCAAGATTCAGATCGCAGACGTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000069_pilon | genome | sc0000069_pilon:1515560..1517864 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 622-1224:604 |
| Aaloc | 544-621:779 |
| Aaloc | 469-543:999 |
| Aaloc | 307-468:1388 |
| Aaloc | 202-306:1609 |
| Aaloc | 157-201:1941 |
| Aaloc | 1-153:2306 |
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