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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000301_pilon:21284..24521+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033203 ID=XLOC_033203|Name=XLOC_033203|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3238bp|location=Sequence derived from alignment at sc0000301_pilon:21284..24521+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGGAGGGCGAGGAGATGATAACGAAGAATTGGCAACCCGCACATTGAG
AATTCAATCCAAGCGCTACTATGTTGATGTCAAACAAAACAACAGAGGAA
GGTTTATTAAACTTGTCGaggtaaaaaaagtaaattttcacctttttggt
CTAATAACCTTCATACCTCCATCGTTAAAATCTTTTAGTCAAAGTGATTA
ATAACACAATTTTaaaaaaaCTATGTAGGTACTACACCCCCTTTTCGATT
TTTAGTCTAGCCGAGtgttattcaatctttttaatGATGTTGTTAAATGC
ATCTCAATGGTCCTGGCCTTTTATTGATAGGGACTTCCGAATGGCTCCAA
AAACAGAATTTCCTTTCCAATGGCTATCGTTGGTGAAGTTCATGATAAAC
TTGCaagttttcaagaattttatgaTAAAATTGGTAAGTGCATGAACATA
CAGTAAAGCAACTTCTTCAGATTTTTCAGATTACTATTGGTATGTCATGA
TTTCCCTAAGACTGAAACCTCGTGGCCAATTATGGGAATTCTCACTTCTT
TAATTTCAGATCCCGATACTGAGCGTGACCCACCTGAAGATGGTAGATTA
AAGAGGTATTGTAATGTTTTAACAGAACAATCTGAACTCGACTCGTTTTC
CTGAAGGAGTTGTATTTAAAAGTCTGCTTAACTATGTGGGTGAAGAGAGT
GTTTATGTGAATGGGCTGATTGGGACGTGTGTAATTATTTTGTTAACCAT
GAAATGCAGTACAGAAGGTATACAAATGCAAAAGTAATTAAGTATCCTTG
TAGCTGTAtcaatctttcaaaatgataaatttGGATTTAGCTGACATATG
TCCACCTTTTTTCAGTGATGACATTCGTGCAGCTCAACGTAAAATCTACT
TTGACTTGAAAGAGAACAAACGTGGAGTTTTCCTTCGAATCAGTTCAACA
GCTTCTTATGGTGCTTCTCGTCAAACGATTGCTCTGCCTGGTGAAGGGAT
CGCTCAAATCAAAGAATGTCTCAGTGACTTTTTGGAAGAGTTTGGTCAAG
ACGAGCAATCTTCCATTGATTTACCTGAGTTCAAAGAAATGAGGATTGAA
CGAAAGaggttttattttgattgtGGTAGCAATGACCGTGGTGCTTTCTT
GAGAATCTCTGAGGTAAGCTTAAAGAAGATATCTTAATTTAATAAGATTG
gatgcaaaattttcaaccatATTTTTTCTGGCAATGGATgcattttactt
tcaatctggcgctTTGGGGGAAAACCATGTGGGTCACGCGTTgttgatgg
gaaataagtggtccACCGCGGGTccccccccccACACTTATTTGGGGGGT
GTAAATCTAAAATCAGCctaaaagtggggggacctaaagGGCTGCACTAA
AGTTATGGGGGCTAATTACAATaattaagaaattgtaaaaatattttttt
gtttggttttgttttgtttggcaCATTTCAGAGGGCAATTAAGCACTAAA
GGGTGCATATGTTTTCTCGATCAGAACCTTcttatatgtttttaaaaata
tatatcatttttctttagatttcttttaagaaatatttaaaaatatataa
cattGAAATCGAAATAATTTGGTGtcgaattatttttctttgcaccTTGA
AAGTACTTTTTGCAGGGCCCATTCAGGGCTTATAAATCAATGATTCAGAA
CTACTTAGCTCCTGCATAGGTTGCACGGCCTGCatggttttcatacaaac
ggTAGATTGGAAGTAACGTTTACcatcaaaattcgaaaaatgtaaaatgc
aaaatcaaagaaagtgctagattcaTTCAAACAGTCATCCGAAATGTGGC
GCATATTTTGAATCATCACTTttgccagggggggggggggggtcatgcag
ttattatataaacactatgacagttactaccgtggtggtatataaaccaa
aatttgggaaaacagttactccaccagtggactaactgcaacatggctcg
tgcctaagcccaaaattgtcgatttttcaatttttcacttaaaattttag
gtttttaaaaattccggaagcaaaaaaattcaaaacatttttttcaaaag
taaaaaaaaaatcacaatattttttcttcaatcaaggcatgaaagatatt
ttaacaaacttggaaaatgattgagatatttaactcttgaacggtcgtta
ataagacgtacccagtaaaatggtatcaaaaatgagggaTTCAGTGGAAA
AATTGccgaatttggcatttttgggggtggtatacaccaattttgagggt
aaaatcagttagtacactatggaataactgcaagggtggtggtgtctata
gAATATGTCCagaattgcagttactccacatagtgtcaaggagtaactgc
aagacccccccctgcTTTTGCTTGCCTAAGACAGGGACTCACCTTAAGTC
TTTGGCCTGAAACACACTAACTTGATTCCCCTTTCCCGAGCTGAAAAGCT
ATACTCTTACcggttttaaattttaaatcaagagtTTGAAAGTAACCAAA
CATTCTAGGTTGAAAGCTCCCTTGTGTTCAATTATTTAACTATACTTCTC
TACTTGATTGCAGGTAACAAGCCGATACCGTAGCTCCATCACTGTCCCAA
GGCAAGGCCTAGAGAAGTTCACTGGTATCATCAGTAAGTGAGATTCCCTT
TTCTGATAACCTTACCTAGTGCATTATAGGGATTAGGGGGGTTTGTTAGT
CTAAGGAGTATTTATAACGATCTAACAGAGCTTGCACCAAAAATAACCGT
CAAAATTTCATTGGGTTTTAAGGCTTGAggacacaaaaagtttttttcac
gttggtacaatgcaacatgctccatcccaccaacctgaggCGTCTCtgcc
ccatttttctttctaccaataaaaatATCCCTGGGACAATGTCTcaggga
caaaatcagtgtGTCTGTTGGGTATTTCCCTTGCGTTGGTGGGAtgaagc
atgttgcattgcaccaataAACTTTTTGTGTCCCCAAGCTTTAGGGTCAA
ATTGGTACTTTTGTAGATAGAGACATATCTCATTTAGAATAGAACCCAGT
CTCcttgattttattgaaatttaaattGATCATGTTATGGAGTTTGGGTT
ACTAGGCTAAGTTTATCAAGAAGAGATGACTTTTACAAATTGCAATTCTT
TTTTAGATGATATCATGGGTCAGATGGACGCCAAGTAA Coding sequence (CDS) from alignment at sc0000301_pilon:21284..24521+ >XLOC_033203 ID=XLOC_033203|Name=XLOC_033203|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1338bp|location=Sequence derived from alignment at sc0000301_pilon:21284..24521+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGGAGGGCGAGGAGATGATAACGAAGAATTGGCAACCCGCACATTGAG
AATTCAATCCAAGCGCTACTATGTTGATGTCAAACAAAACAACAGAGGAA
GGTTTATTAAACTTGTCGagAAAGGAGGGCGAGGAGATGATAACGAAGAA
TTGGCAACCCGCACATTGAGAATTCAATCCAAGCGCTACTATGTTGATGT
CAAACAAAACAACAGAGGAAGGTTTATTAAACTTGTCGagGGACTTCCGA
ATGGCTCCAAAAACAGAATTTCCTTTCCAATGGCTATCGTTGGTGAAGTT
CATGATAAACTTGCaagttttcaagaattttatgaTAAAATTGGGACTTC
CGAATGGCTCCAAAAACAGAATTTCCTTTCCAATGGCTATCGTTGGTGAA
GTTCATGATAAACTTGCaagttttcaagaattttatgaTAAAATTGATCC
CGATACTGAGCGTGACCCACCTGAAGATGGTAGATTAAAGAGATCCCGAT
ACTGAGCGTGACCCACCTGAAGATGGTAGATTAAAGAGTGATGACATTCG
TGCAGCTCAACGTAAAATCTACTTTGACTTGAAAGAGAACAAACGTGGAG
TTTTCCTTCGAATCAGTTCAACAGCTTCTTATGGTGCTTCTCGTCAAACG
ATTGCTCTGCCTGGTGAAGGGATCGCTCAAATCAAAGAATGTCTCAGTGA
CTTTTTGGAAGAGTTTGGTCAAGACGAGCAATCTTCCATTGATTTACCTG
AGTTCAAAGAAATGAGGATTGAACGAAAGaggttttattttgattgtGGT
AGCAATGACCGTGGTGCTTTCTTGAGAATCTCTGAGTGATGACATTCGTG
CAGCTCAACGTAAAATCTACTTTGACTTGAAAGAGAACAAACGTGGAGTT
TTCCTTCGAATCAGTTCAACAGCTTCTTATGGTGCTTCTCGTCAAACGAT
TGCTCTGCCTGGTGAAGGGATCGCTCAAATCAAAGAATGTCTCAGTGACT
TTTTGGAAGAGTTTGGTCAAGACGAGCAATCTTCCATTGATTTACCTGAG
TTCAAAGAAATGAGGATTGAACGAAAGaggttttattttgattgtGGTAG
CAATGACCGTGGTGCTTTCTTGAGAATCTCTGAGGTAACAAGCCGATACC
GTAGCTCCATCACTGTCCCAAGGCAAGGCCTAGAGAAGTTCACTGGTATC
ATCAGTAACAAGCCGATACCGTAGCTCCATCACTGTCCCAAGGCAAGGCC
TAGAGAAGTTCACTGGTATCATCAATGATATCATGGGTCAGATGGACGCC
AAGTAAATGATATCATGGGTCAGATGGACGCCAAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301_pilon | genome | sc0000301_pilon:21284..24521 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 697-726:3209 |
| Aaloc | 625-693:2614 |
| Aaloc | 328-624:867 |
| Aaloc | 283-324:562 |
| Aaloc | 178-279:331 |
| Aaloc | 58-177:1 |
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