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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000301_pilon:45524..49711- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033198 ID=XLOC_033198|Name=XLOC_033198|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4188bp|location=Sequence derived from alignment at sc0000301_pilon:45524..49711- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTCAAGTATAGTTGCGATATCATTGGCGATTTTTTCAGGTATGTA
TTTCTCATTCACTTAGCTGGTTATTTATTTCATCAGATTTTATCAGAAGT
ATTTTCTTATAGAGCCATTACTTTTCGCAAACTTAGCTTACTTGAACTTT
AATTTCCCCAAGATGTAAAAAGGTTTGTCGATTTTCGATTTCTAAACTAC
CTTATAGGCCCTTTTTACACCGGCCCTTATTGGCGTTATTTTTGGGCTCG
TGGCGTAATAAGGTCCGACGTAAAAGGGGCCAATAAGGTATGTTTATTTT
ATTGTAAACAAAAATTTTATCATTCCAAATCTTTAAACTTCTACAGCCAT
GATTATTTCTCTTTCCAGTTCTCCATACAACCGAAAGTCTCAAATGCTAC
GGTCTCCGTACTAAAAATCCGTCACCGACAAACCTCGGCAAAACAATCGA
ATGTCCACAAAACGTCACACATTGTGTCACAGGTATTGGTACGATTGGAC
AACGTGGTGAAAGGAAAGAATTCGAAATGCTTGGACGAGCATGCTTCGCG
GCCGACAAAGCGAAACAATTTTGTACGCGCGGGCGAAATTGTCAGTATAT
GGTGAAATCTGACGGATCGATATTCAAACTTTGTTATCATTGCTGTGAGA
CGGATTTATGTAATCATAAAATGCCTGGGAACGAGAAAAATGATTCTGAA
GGTATTACCACTAATCTCCAACTATATGGCTGGATCGGGTTTCCGGGTTT
CCCATATAAAAGGAAGTGTGTTCAGCTGAAGAGCTAACTAGTCCGCCATC
TTGTACCTTATCGGGGAAAACTTCGTCGGGGAAAAGTGACGAAATTTTGG
ACAAGTGACGAATATTTTCCCCGACGAAAATTTTCCCCGGCCTTAATGCA
TTTACCAACTACCAGCAAGTGACGAATTTTTCCCCGACGAAGTTTTCCCC
GATAAGGTATTCTAATCTGGATGTCGAGGTTCAAAAACCTAGTGTGCAGG
ACTAGTCGACCATAAAACTGGATACACTTTCACGGGAAATTTGTAAGCAG
TTAAAATTAGCAGTTATCTATTGTGTAAAAACAATATAATATCTGTGGTA
TTAACACTAAGCTCATTAAGAGGTCCGATTTTAAGGTTGGATGACGTCAA
ATATATGTATTCATAAGCTTACAGTGTAGGGAACAACCTCGCGAGCCAGG
GCGAATCGTTGGCGGTCAGGCGGCAAAAGTGAGGGCGGGGATGGCCAGAC
GATAAGCGCCCATCTATAACGTCAAAAAGCTTATCGCCCTGGGTACGAGG
TTGTGTAGGGAATTAAAATATTTAATATCGACATTCTCTCCTAGAAAATT
GTCGTAAAAAATCGACACAAAATGTAACCAAGATTAATTTACTTCTTTTT
ATCACTTAATAGAACATCTAACGGGGCTCAGTTTTAAGACCATTAAGAAA
ACTTTAACGAATGTTTTTTCAGATTCGCCTGACTCGAACACGCCTGAACA
ATCTTCAAAACAGAAAGAACACGAAAAGAAACGAAAGGTTTCCTCTACTG
AAAACGAAAAACAAGAAATCAACCGAACATCGAAAACCAATGAAAACAAA
ACGAAAAAGACAAAAAAGTTGGTCGAAATCACAAGAATTGCTAAACGAAG
AATACCGACAATTATTCGTTTGAAAACAACAAAGCCACCGGCTATAACCA
CAACTACAAAACGAAAATCTACGACAATGTTAAAAACAACGACTACGATA
CCGACAACAGAAAAATTTACCGAAAAGCAATCAATGACTGTTCAAACAAC
AACGGAAAGTAAGCCAACGCCAACGATCAAAACTTCGCAAAAACCGAAAA
CAGACGAATTCGAAACGAATAAAATCATCGGTAAGAAACATAAGCCGACT
TTAAAACTAAACGAAAATACGATACACAAGAGAGCGAGAGACTTTAACAA
CAATTTCGGACAATTTCGAGCTAATACAATCGTTCAAAAATCTGAATATA
ACCTTTCAAAGCAAAACATTTCAATTAAAGCACTTTCATGTCATAAAGAC
AAAATGACAGCGTACCTCAACGTCGAAAACATGCAAAAAGACTTTTACAT
CATTCTTCGAAATTCAAGCTGCAGATATTTCGTCCGAATTCTAAACATTG
TACAAAACACTATCGAAGTCCCGATTGATTATCACAGCTGTGGTACCATT
ATGGTCGAAAATAAAGATCACGTGACCTATTCTAGCCAGTTATCGTTCGC
GAAAGAAGATTTGAGCGTCGAGGAGCACGTGTTGACAGTGAAATGCAGCA
AGAAGAAATTAAAAGCTGAACAGACGGCTGCAGCCATATTAGAAAAAGGT
GAGCAAAAATCTATTTTTTTGTTGTAAGATTTTTATCGCCAATTGACATG
AATCTCAAAGTGATATTTGCGTACTCGTTTTTTCTTATAAGAACAAACTA
CACAAGAAATTAAAGGCTTCGATGGCCAATATATCAAGAACAAGTTAAGA
AAATTCTAAGGCTCTGCTCTGCAGATTCTAAAACACCCGATTTCTCAGGA
AAATGGACAAAATTACTCAAAAAAAGGCGAAAATAGGAACATGTTAAGAA
CATTTTTAGACTTATAAACCTTAGAAAGAATATCCGAAGCTTTGAACATT
TTGGATGTTCTTATAAAAAAACGTGTAACGTCAAAAACATCCAAAGTACT
TCGTATTGACTGACTGAATTCTTTTGTTTTATTCTATTAGGTCGAAAGAA
GCCATACCAATTATCGCTTCATTTGTTCAAAAAGTCTACATATTTGGATG
AGTATTACCCCGATAACAACCCGATATCAATACCGAATTATGGATGGGTT
TTCAGTGAAGTCAGATTAGCATCAAAACATGACAATAATGTTCTGAAACA
TCTGGATTGTCTTTTGAGAATGAAACAGGGTGAAAAAGGAGAAAGAATCA
AAGAGATATTGGTTATTGAAAATTTGTAAGTTCTTCAATAAATGCCTAAA
GTAAGCAATTACCTAGTCCCAGCTCCAGTCCCCGAAAATTCCTTTTTACA
AAAGCACAAGGTACAAACTCACGCCCGCAGTCCCCCTTTCTTCACCATTT
CACAGATATGATAAAGTTCATGATTGCACCACTTCAAAAAAAATTAAAAC
TGTTTTTTGCAAGTTGTCTAAAAGGTGCTGCAATAAAACTCATTTATCAT
CATTCTTATGGCAAAACTATACTAGGCTAAGCTTAATCGAATTACTCGAT
TGGTCTGAAGAAAACACCAGTTTAATTGGTTCAGAAATTTATTTTTCTTC
AGGAATCCTGTCAACAGGTCAGTTCGCATCATTCACAAGAAGCGAACATC
AATCAGATTCCGTATTCACTTGAAGCCGTTTACAAACATTAACGATAATT
TGGAGCTCGTATGTTTCGCACACGCGTCGTGTGACAATAAAGAGAAACAA
GACCAATCTTCAGGTTGTGAAGCAACAAGGCAAGCTGTTACCATGGAAAC
AGAATATGTGGCATTGAAACGAGGCAGAATTCAAGTAGTGGAAACGAAAG
GTGAGTTGATTAAATCAAGATGTGCAATATTCATAATGTTCAAGACATTT
CTATACGGGAACAAAACAACAAAGCCTTTCACGCATCTTTTTATAAGAAC
ATTCACAACTTTTGAAGCCTTGGGATGCTCTTAACTTTTTGAGTTTTGAG
CTTAAAAATGTTCTTAACATGTTCTTATTTTCCTCATTTTGTGAGTATTT
TTGTCCACTTCCCTATGAAATTCCGTGTTCTAAAGACCGCAAAGCCTTAA
AATTTTCTTAATATGAAATTCATTAAAACTTCAGCTCGAAGAAAAGCTCT
TTTATTTGAATACAACAAATTTGAAATAAAAAACGTTTATTTCTTTTTCA
GTCACGTCAGGCAAAAAGCAATCCGGATTAATATCTTCAGAGACGACGCG
CTACATCATTCTAGGATGTGTACTCGGAATGATTTTCATACTCACGATTG
CATGTGTTGCTATCAACAAACATGGATGGGCTATTCGGATCAATAACGAT
TCAGAAAGCGGAGATAGCCATGACAGTCAACCGGAAAAGTCACCGGTAAA
GAGTGTTACCGCTGTTCTAGAAGCTGAATCACCCGGAACGTCCGGTCTTC
AACGATCAAAGGAGAACACAGCATATAGATTTTCATGA Coding sequence (CDS) from alignment at sc0000301_pilon:45524..49711- >XLOC_033198 ID=XLOC_033198|Name=XLOC_033198|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4044bp|location=Sequence derived from alignment at sc0000301_pilon:45524..49711- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGTCAAGTATAGTTGCGATATCATTGGCGATTTTTTCAGATGAAGT
CAAGTATAGTTGCGATATCATTGGCGATTTTTTCAGTTCTCCATACAACC
GAAAGTCTCAAATGCTACGGTCTCCGTACTAAAAATCCGTCACCGACAAA
CCTCGGCAAAACAATCGAATGTCCACAAAACGTCACACATTGTGTCACAG
GTATTGGTACGATTGGACAACGTGGTGAAAGGAAAGAATTCGAAATGCTT
GGACGAGCATGCTTCGCGGCCGACAAAGCGAAACAATTTTGTACGCGCGG
GCGAAATTGTCAGTATATGGTGAAATCTGACGGATCGATATTCAAACTTT
GTTATCATTGCTGTGAGACGGATTTATGTAATCATAAAATGCCTGGGAAC
GAGAAAAATGATTCTGAAGTTCTCCATACAACCGAAAGTCTCAAATGCTA
CGGTCTCCGTACTAAAAATCCGTCACCGACAAACCTCGGCAAAACAATCG
AATGTCCACAAAACGTCACACATTGTGTCACAGGTATTGGTACGATTGGA
CAACGTGGTGAAAGGAAAGAATTCGAAATGCTTGGACGAGCATGCTTCGC
GGCCGACAAAGCGAAACAATTTTGTACGCGCGGGCGAAATTGTCAGTATA
TGGTGAAATCTGACGGATCGATATTCAAACTTTGTTATCATTGCTGTGAG
ACGGATTTATGTAATCATAAAATGCCTGGGAACGAGAAAAATGATTCTGA
AGATTCGCCTGACTCGAACACGCCTGAACAATCTTCAAAACAGAAAGAAC
ACGAAAAGAAACGAAAGGTTTCCTCTACTGAAAACGAAAAACAAGAAATC
AACCGAACATCGAAAACCAATGAAAACAAAACGAAAAAGACAAAAAAGTT
GGTCGAAATCACAAGAATTGCTAAACGAAGAATACCGACAATTATTCGTT
TGAAAACAACAAAGCCACCGGCTATAACCACAACTACAAAACGAAAATCT
ACGACAATGTTAAAAACAACGACTACGATACCGACAACAGAAAAATTTAC
CGAAAAGCAATCAATGACTGTTCAAACAACAACGGAAAGTAAGCCAACGC
CAACGATCAAAACTTCGCAAAAACCGAAAACAGACGAATTCGAAACGAAT
AAAATCATCGGTAAGAAACATAAGCCGACTTTAAAACTAAACGAAAATAC
GATACACAAGAGAGCGAGAGACTTTAACAACAATTTCGGACAATTTCGAG
CTAATACAATCGTTCAAAAATCTGAATATAACCTTTCAAAGCAAAACATT
TCAATTAAAGCACTTTCATGTCATAAAGACAAAATGACAGCGTACCTCAA
CGTCGAAAACATGCAAAAAGACTTTTACATCATTCTTCGAAATTCAAGCT
GCAGATATTTCGTCCGAATTCTAAACATTGTACAAAACACTATCGAAGTC
CCGATTGATTATCACAGCTGTGGTACCATTATGGTCGAAAATAAAGATCA
CGTGACCTATTCTAGCCAGTTATCGTTCGCGAAAGAAGATTTGAGCGTCG
AGGAGCACGTGTTGACAGTGAAATGCAGCAAGAAGAAATTAAAAGCTGAA
CAGACGGCTGCAGCCATATTAGAAAAAGATTCGCCTGACTCGAACACGCC
TGAACAATCTTCAAAACAGAAAGAACACGAAAAGAAACGAAAGGTTTCCT
CTACTGAAAACGAAAAACAAGAAATCAACCGAACATCGAAAACCAATGAA
AACAAAACGAAAAAGACAAAAAAGTTGGTCGAAATCACAAGAATTGCTAA
ACGAAGAATACCGACAATTATTCGTTTGAAAACAACAAAGCCACCGGCTA
TAACCACAACTACAAAACGAAAATCTACGACAATGTTAAAAACAACGACT
ACGATACCGACAACAGAAAAATTTACCGAAAAGCAATCAATGACTGTTCA
AACAACAACGGAAAGTAAGCCAACGCCAACGATCAAAACTTCGCAAAAAC
CGAAAACAGACGAATTCGAAACGAATAAAATCATCGGTAAGAAACATAAG
CCGACTTTAAAACTAAACGAAAATACGATACACAAGAGAGCGAGAGACTT
TAACAACAATTTCGGACAATTTCGAGCTAATACAATCGTTCAAAAATCTG
AATATAACCTTTCAAAGCAAAACATTTCAATTAAAGCACTTTCATGTCAT
AAAGACAAAATGACAGCGTACCTCAACGTCGAAAACATGCAAAAAGACTT
TTACATCATTCTTCGAAATTCAAGCTGCAGATATTTCGTCCGAATTCTAA
ACATTGTACAAAACACTATCGAAGTCCCGATTGATTATCACAGCTGTGGT
ACCATTATGGTCGAAAATAAAGATCACGTGACCTATTCTAGCCAGTTATC
GTTCGCGAAAGAAGATTTGAGCGTCGAGGAGCACGTGTTGACAGTGAAAT
GCAGCAAGAAGAAATTAAAAGCTGAACAGACGGCTGCAGCCATATTAGAA
AAAGGTCGAAAGAAGCCATACCAATTATCGCTTCATTTGTTCAAAAAGTC
TACATATTTGGATGAGTATTACCCCGATAACAACCCGATATCAATACCGA
ATTATGGATGGGTTTTCAGTGAAGTCAGATTAGCATCAAAACATGACAAT
AATGTTCTGAAACATCTGGATTGTCTTTTGAGAATGAAACAGGGTGAAAA
AGGAGAAAGAATCAAAGAGATATTGGTTATTGAAAATTTGTCGAAAGAAG
CCATACCAATTATCGCTTCATTTGTTCAAAAAGTCTACATATTTGGATGA
GTATTACCCCGATAACAACCCGATATCAATACCGAATTATGGATGGGTTT
TCAGTGAAGTCAGATTAGCATCAAAACATGACAATAATGTTCTGAAACAT
CTGGATTGTCTTTTGAGAATGAAACAGGGTGAAAAAGGAGAAAGAATCAA
AGAGATATTGGTTATTGAAAATTTGAATCCTGTCAACAGGTCAGTTCGCA
TCATTCACAAGAAGCGAACATCAATCAGATTCCGTATTCACTTGAAGCCG
TTTACAAACATTAACGATAATTTGGAGCTCGTATGTTTCGCACACGCGTC
GTGTGACAATAAAGAGAAACAAGACCAATCTTCAGGTTGTGAAGCAACAA
GGCAAGCTGTTACCATGGAAACAGAATATGTGGCATTGAAACGAGGCAGA
ATTCAAGTAGTGGAAACGAAAGGAATCCTGTCAACAGGTCAGTTCGCATC
ATTCACAAGAAGCGAACATCAATCAGATTCCGTATTCACTTGAAGCCGTT
TACAAACATTAACGATAATTTGGAGCTCGTATGTTTCGCACACGCGTCGT
GTGACAATAAAGAGAAACAAGACCAATCTTCAGGTTGTGAAGCAACAAGG
CAAGCTGTTACCATGGAAACAGAATATGTGGCATTGAAACGAGGCAGAAT
TCAAGTAGTGGAAACGAAAGTCACGTCAGGCAAAAAGCAATCCGGATTAA
TATCTTCAGAGACGACGCGCTACATCATTCTAGGATGTGTACTCGGAATG
ATTTTCATACTCACGATTGCATGTGTTGCTATCAACAAACATGGATGGGC
TATTCGGATCAATAACGATTCAGAAAGCGGAGATAGCCATGACAGTCAAC
CGGAAAAGTCACCGGTAAAGAGTGTTACCGCTGTTCTAGAAGCTGAATCA
CCCGGAACGTCCGGTCTTCAACGATCAAAGGAGAACACAGCATATAGATT
TTCATGATCACGTCAGGCAAAAAGCAATCCGGATTAATATCTTCAGAGAC
GACGCGCTACATCATTCTAGGATGTGTACTCGGAATGATTTTCATACTCA
CGATTGCATGTGTTGCTATCAACAAACATGGATGGGCTATTCGGATCAAT
AACGATTCAGAAAGCGGAGATAGCCATGACAGTCAACCGGAAAAGTCACC
GGTAAAGAGTGTTACCGCTGTTCTAGAAGCTGAATCACCCGGAACGTCCG
GTCTTCAACGATCAAAGGAGAACACAGCATATAGATTTTCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301_pilon | genome | sc0000301_pilon:45524..49711 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1744-2028:286 |
| Aaloc | 1495-1740:886 |
| Aaloc | 1261-1491:1447 |
| Aaloc | 433-1257:2667 |
| Aaloc | 379-426:2715 |
| Aaloc | 46-375:3819 |
| Aaloc | 1-42:4189 |
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