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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000301_pilon:63713..67847- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033197 ID=XLOC_033197|Name=XLOC_033197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4135bp|location=Sequence derived from alignment at sc0000301_pilon:63713..67847- (Clytia hemisphaerica_ch_hm2_pilon)
CACAAACACAACAAAAATATTCACAACAAATTTCTTCACACATACAACAA
CACAACTACAACAAAAATGGATTGCGTTGATTTGGAAACAAGACTTAAAG
AATTCGATCAAGAACATTTGATGAGATTTTACAACACTCTGGATGATGAC
CAACAAATCAAGTTGACCAATGAATTGAAAGGCGTTGATTATAAATTGAT
CACCAAATTGTATGGCAGAGCTAAAGTCGACTTGGAAAAGACTGACGTGA
GTTACACTCTCTTGCTTTATAAGCATACGGGAAGTTTGGGCTAAGGCTCT
GATTAAGCTTAGCAAAATTTTGTTTTCACATCAGCCTCAAATTATGCTTT
ATGTCAAATGTAGGTTTTATAAAAAAAATCGTCAATTTCTGTTTCTCAAT
TCTGGTCATCAACAGCAGGATTCGAATGTTTTGAAATTCCGTTAATAAGT
TCGACAAGAACATGGCGGACTAGTCGACTTTAAAACTGGACACATTTTCA
CGGGAAATTTGTGAGCAGTTAGTCAGAGTTAGCCTATCTAGTGAGTGAAG
GGATATGACATTTGTATATATGCAAGACAGTGAACAATCAGTAAATTTAT
ATCTCATCCATATTCAACAGGTCAAGAAAGACGATTTGATGGAACTTATT
TCACCAGAATTGAGAGTGGAAAAGTCTACCTCACCGAAAGAAACAGTCCA
AGAATGGGAAAACAGAGGTCTACAAGAGATGGGAGATAACACCGTTGGTG
TCATTCTATTGGCTGGTGGACAAGGAACGCGACTTGGTGAGTCTTTTCTT
TGAGAAACAGTTTTTTGGTGTCTTTATGGGAGATACAGACTCATCATTAT
ATATTCAATATTGAACTTTGTCTCATAAGAGTATCCTATCATAAGAGTCT
CTTTTGATTAAAAACTCTTAACCCAAAATATAGGTTGTACACATTACATG
ACATTCTCCGTTAATAAGTCTTTATGATATAGTAATCTAGGCAAAGTCTC
GTTTGTTTTCAATATTTATCAAATAATTAATTTGCATCCCCTTTCCTGTT
ATAGGCTTCAACCATCCCAAAGGCATGTACAATGTTGGTCTCCCATCCAA
CAAGACATTATACCAACTCCAAGCAGAACGAATTTTCAAACTACAAAAAT
TAGCTGAAACAAAAACTGGAAACAAATCTGTTATCAGATGGTACGCCATT
TTATTTCAAACTACTTCATTTTTTTATGATTTAAATCAAAATGCGTTAAA
TTTGCAGGTGTATGTCGAATGAATGGTCTCTCTTCTATAAGAAGCCAGCT
CCCTAAATTTCTTGGTACTGGTTATAGAACTTTTTTAAATAAATTGAATC
TAAAAACTATGAAACTTTCCACATCAATGTCCAATCTTCATCAATATCAT
TAAACTTCTGCCTTAGCCAGGTTCCCGCAGTTAATCCGTATTCGAAGAAT
CTTGGATTAGTTGTTCATTAAATCGTTTTTTATTTGTCTGAAGTTGAAGA
TACATATGACTTTATGGAATAAAAATAACTTTGGAAAAAATGAAAGTGAA
TGAGTGGCCCACAAAAAAATCGTACTAGAAGCCTACAGGTTCCACGATGG
CTTTTCGAACTTGGAAAGCGATCTATGATAACGATATTAACAACTTCAAT
GGTTCCATTTTCAGGTACATTATGACCAGTGAATCAACTCTCAAAGACAC
AAAAGATTATTTCGAGAGCAACTCGTTCTTTGGTTTGGAGCCATCAGCTG
TTGTTTTTTTTGAGCAGCATCAACTACCATGTTTGACATTCGAAGGAAAA
TTAATCCTGAAAACACCAGGTATTATATCTTGCCTCTGAAGAACCATGAC
CAGTGAGACACTGTCTTTGTCCATAAGTACAACATATATTAATTGAATTT
TCATGCGTTTCTAAGTTGATAAGCGATTCGTATTGGCTAAAGTTCTCTAC
AATCTATATAAGTGATAATAATAAAAATTCTACAATGATAAAAACTCCAC
CAAACTACTGCAGGCAACAAAATCTTTTAGTTATTTTTACTTTACTTTAT
TTAAATTTGATTAATTTCAGGATCTTTGGCTAAGGCACCAGACGGTAATG
GTGGATTATACACCGCCCTTCGAAGCGCCAAAGTTGTCGATGATATGGAA
CAAAATGGCGTCAAACACGTTTTTGTTTACTGTGTAGATAATATTCTTGT
TAAAATTGCTGACCCATCATTTATTGGTTATTGTGCAATGAAAGATTTAG
ATGCTTCGAATAAGGTATGAGAAAATAACTCTAAGAGTTCTAAAAGACCA
TTCGTGTTAAATTCCATTAGATGTTTTCGTTAAGAAACTGATCGATTTGT
GTTCTTAGCTGGCATTCAACGTTATTCCAACGTTCATCAACGATGGTAGT
AAATTACAAGACTTAGAGGGGGGCGTACGGGGTTTGTGATTTGCGAAATA
CGACAATAATTTTGCCAAATTTCCGAAATTCCGTAAAAAAATACTTGCAA
TTCTGATACCGAATTTTTGGGTATCTTTTCTCGTTTTGACTAATTTTTAA
TCAAATTTGATTTTTCATGTATGAATTCCGAAAAAAGGGGATAAAAACTT
TAAAATACCGAAATTTTGAAGCAAAAATATATGGATTTCCGAAATCGAAA
CAATTTCAGAATTCCGAAATACAGAAGGAATTTTTCCTGAATTCCGAAAA
ACAGTACACCCCCACTTAGAGGTCAGTGATAACGAGTAAAGTCTATCTCA
AAGAAATCTGCAGCGGAGACAAAAAACTAAAGATAAATGTTGAAAAGATA
ATCATGAGTGGAATATTTTCAAAACGATGATAATTTTTTCATCACAATTT
GAGGAACCGACAATTAATATACTAATTATTTGTAATATATTCCGACTTTA
ATAGTCATCAACGGGCTTATAGTGATTGGTGGTAATCTTAATTTTAAAAT
AATCTTTTTCTTCCATTTCTTCTTTCAGGTGATTGAAAAGAAAGAACCAA
ATGAGTCAGTCGGTGTGGTGTGTAAATGCGAAGGAAAATTCCAAGTTGTT
GAATACAGCGAAATCTCACAAACGACAGCCGAGAAAAGAAGTGAAGATGG
TCGATTATTGTTCAACGATTCCAACATTTGCATGCATTACTTTAACACGC
GATTCTTAAGACAGATTATCACGTATGTTGTTTAATGTATCTCCAACTCG
AACTTCTATAATTCGAATTATCAGAAATCTGTACATTCACCATAGCTCTG
CTTTCACACCCTGAAAAGAAGTCTTTTGGTTCCATTAGTATTTGAATTCC
ACTGTACTGCACCTCTTGTATTTTTCAAAATGTTATTTCTGTTCAGCACA
TTGAGGTCTGGGGATGGGGAATAAGTTAGCAAGGAAAAGTGTCTTCTATA
TAATCATGTATCTTGTTTCCAGTCCCTAATTGAGAATTCTTCAAAAATAA
AAAGTTTTTAAAATTTAAACTTAGCCCGGGAAATAGGCTAAGAATCGGTG
AAATTGCCATAAAGTCATTTTAAATGAACATACAAATGTATAAAAACCGA
AAAATAGGGAGGTTTTTTTTTTACCCAACCGTTAGAATAAAAACCCTATT
TAACTGATAATATGGGCAATTTATCCTTGGCAAATTTTCTGAATGTTTTT
CATTCAATTTTTTCACCACAGGGAACACTTAGAGGAGATGCCACATCACA
TTGCCAAGAAGAAGATTCCATACGTTGATGATAAAGGAGTTGAAATTAAA
CCCACCAAACCAAATGGAATGAAATTAGAAAAATTCGTTTTCGATGTCTT
CCAATACACGAGGTACTTATGCTTTGATTGGTGCTTTTTTAAGTATTTTT
CCCATAATTTTTCATAAGAGGGGCGTGATTGGGTGGTTGGGCTTGTGCCT
CTAGCATAAACCGACTCTTCGCTACCAAGAAATATCCTGGCAAATTCGTT
TGTTTTTGTTTCGAGTCACGCTGTCTTCAGGGGAAACGATAGATTTTGTC
AGGACATTCTTTCAAGTAATTTGCAACGTTGATTTATTTAAATAAACGTT
TCATTATCTTTTTAACAGTAATTTCGGTATCTTCGTTTGTGAACGTGACG
AAGAATTTTCACCCTTGAAGAATGGCCCTGATACA Coding sequence (CDS) from alignment at sc0000301_pilon:63713..67847- >XLOC_033197 ID=XLOC_033197|Name=XLOC_033197|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2598bp|location=Sequence derived from alignment at sc0000301_pilon:63713..67847- (Clytia hemisphaerica_ch_hm2_pilon)
CACAAACACAACAAAAATATTCACAACAAATTTCTTCACACATACAACAA
CACAACTACAACAAAAATGGATTGCGTTGATTTGGAAACAAGACTTAAAG
AATTCGATCAAGAACATTTGATGAGATTTTACAACACTCTGGATGATGAC
CAACAAATCAAGTTGACCAATGAATTGAAAGGCGTTGATTATAAATTGAT
CACCAAATTGTATGGCAGAGCTAAAGTCGACTTGGAAAAGACTGACCACA
AACACAACAAAAATATTCACAACAAATTTCTTCACACATACAACAACACA
ACTACAACAAAAATGGATTGCGTTGATTTGGAAACAAGACTTAAAGAATT
CGATCAAGAACATTTGATGAGATTTTACAACACTCTGGATGATGACCAAC
AAATCAAGTTGACCAATGAATTGAAAGGCGTTGATTATAAATTGATCACC
AAATTGTATGGCAGAGCTAAAGTCGACTTGGAAAAGACTGACGTCAAGAA
AGACGATTTGATGGAACTTATTTCACCAGAATTGAGAGTGGAAAAGTCTA
CCTCACCGAAAGAAACAGTCCAAGAATGGGAAAACAGAGGTCTACAAGAG
ATGGGAGATAACACCGTTGGTGTCATTCTATTGGCTGGTGGACAAGGAAC
GCGACTTGGTCAAGAAAGACGATTTGATGGAACTTATTTCACCAGAATTG
AGAGTGGAAAAGTCTACCTCACCGAAAGAAACAGTCCAAGAATGGGAAAA
CAGAGGTCTACAAGAGATGGGAGATAACACCGTTGGTGTCATTCTATTGG
CTGGTGGACAAGGAACGCGACTTGGCTTCAACCATCCCAAAGGCATGTAC
AATGTTGGTCTCCCATCCAACAAGACATTATACCAACTCCAAGCAGAACG
AATTTTCAAACTACAAAAATTAGCTGAAACAAAAACTGGAAACAAATCTG
TTATCAGATGGCTTCAACCATCCCAAAGGCATGTACAATGTTGGTCTCCC
ATCCAACAAGACATTATACCAACTCCAAGCAGAACGAATTTTCAAACTAC
AAAAATTAGCTGAAACAAAAACTGGAAACAAATCTGTTATCAGATGGTAC
ATTATGACCAGTGAATCAACTCTCAAAGACACAAAAGATTATTTCGAGAG
CAACTCGTTCTTTGGTTTGGAGCCATCAGCTGTTGTTTTTTTTGAGCAGC
ATCAACTACCATGTTTGACATTCGAAGGAAAATTAATCCTGAAAACACCA
GGTACATTATGACCAGTGAATCAACTCTCAAAGACACAAAAGATTATTTC
GAGAGCAACTCGTTCTTTGGTTTGGAGCCATCAGCTGTTGTTTTTTTTGA
GCAGCATCAACTACCATGTTTGACATTCGAAGGAAAATTAATCCTGAAAA
CACCAGGATCTTTGGCTAAGGCACCAGACGGTAATGGTGGATTATACACC
GCCCTTCGAAGCGCCAAAGTTGTCGATGATATGGAACAAAATGGCGTCAA
ACACGTTTTTGTTTACTGTGTAGATAATATTCTTGTTAAAATTGCTGACC
CATCATTTATTGGTTATTGTGCAATGAAAGATTTAGATGCTTCGAATAAG
GATCTTTGGCTAAGGCACCAGACGGTAATGGTGGATTATACACCGCCCTT
CGAAGCGCCAAAGTTGTCGATGATATGGAACAAAATGGCGTCAAACACGT
TTTTGTTTACTGTGTAGATAATATTCTTGTTAAAATTGCTGACCCATCAT
TTATTGGTTATTGTGCAATGAAAGATTTAGATGCTTCGAATAAGGTGATT
GAAAAGAAAGAACCAAATGAGTCAGTCGGTGTGGTGTGTAAATGCGAAGG
AAAATTCCAAGTTGTTGAATACAGCGAAATCTCACAAACGACAGCCGAGA
AAAGAAGTGAAGATGGTCGATTATTGTTCAACGATTCCAACATTTGCATG
CATTACTTTAACACGCGATTCTTAAGACAGATTATCACGTGATTGAAAAG
AAAGAACCAAATGAGTCAGTCGGTGTGGTGTGTAAATGCGAAGGAAAATT
CCAAGTTGTTGAATACAGCGAAATCTCACAAACGACAGCCGAGAAAAGAA
GTGAAGATGGTCGATTATTGTTCAACGATTCCAACATTTGCATGCATTAC
TTTAACACGCGATTCTTAAGACAGATTATCACGGAACACTTAGAGGAGAT
GCCACATCACATTGCCAAGAAGAAGATTCCATACGTTGATGATAAAGGAG
TTGAAATTAAACCCACCAAACCAAATGGAATGAAATTAGAAAAATTCGTT
TTCGATGTCTTCCAATACACGAGGGAACACTTAGAGGAGATGCCACATCA
CATTGCCAAGAAGAAGATTCCATACGTTGATGATAAAGGAGTTGAAATTA
AACCCACCAAACCAAATGGAATGAAATTAGAAAAATTCGTTTTCGATGTC
TTCCAATACACGAGTAATTTCGGTATCTTCGTTTGTGAACGTGACGAAGA
ATTTTCACCCTTGAAGAATGGCCCTGATACATAATTTCGGTATCTTCGTT
TGTGAACGTGACGAAGAATTTTCACCCTTGAAGAATGGCCCTGATACA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301_pilon | genome | sc0000301_pilon:63713..67847 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1237-1302:67 |
| Aaloc | 1096-1233:464 |
| Aaloc | 901-1092:1158 |
| Aaloc | 709-900:2064 |
| Aaloc | 553-705:2471 |
| Aaloc | 418-549:3080 |
| Aaloc | 250-414:3516 |
| Aaloc | 4-249:4136 |
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