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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000255_pilon:439534..443980+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033189 ID=XLOC_033189|Name=XLOC_033189|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4447bp|location=Sequence derived from alignment at sc0000255_pilon:439534..443980+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATGTTTTACTTGTACCTCAAAATTTAGTTGGCGAAAAAGAGAGGT
AAACTCATCTGTAATCTCATTAGACAAGTTATAGAAACTATTACTGCCaa
aaaaaGTCTGTTACatgatttttctcattttggactttttttggtacata
attttcatcatagcttttgtttgactaattttaaaatttcaaaaatgctt
TCCTTTCCTCAACACAATGCAAAAGGAATTAAGTACCtatgaaataaatt
ttctatACTTTATTTCGCACATCTAGAATGTATTTATAGTAAGATTCAAA
gatgttcttcaattctttcaTTCCAATGGATATTCCCTCAATTCTTATTT
AAGGTCTTTGGAATACAGTTTACCTGAATTTGAATATTCATTATTTATTG
TTAATTACTGCTCAATTTTCTGTCTCTGTCAGCATAGACACTTCCAAAAT
GGCTTTctactttttgataaaattatgtAAGTTTGCTATGGACAGAAAAT
AATTTATCGCGATGATATTGTGTTGGACATTCAAGATGTCTTTCCGTTTC
AAATCCATGATTTTATGGCGGTGTCATTGGTGCTGTattgtattttattt
cattACATTTTTCTTTACAGCATGGATGTCCAAATTGTGGAAAGGCATTT
TGTAAAGATTGCTTGAACTATACAGCATCTGTCAAAAGGCTTGGTGGTAA
ACAAACCAATGTTTGTGTGGATTGTCATAAGAAGTTAAATGTCAAGTATG
ATTATTTTCTTGTCTTATTGCAAAAATTTGATGCTGTAATTGTAAAGCTA
TGTAAATATAATGTGGAAAATTGTCAgttctcaactttggaaaatagtga
agccaaaatattttgagattttaatcaGGACCCCAAAGGGGTTCTTTTGA
CCATTGATTTTAGGTTATCCGATTATCCTTTTTAAAGGACAGTCCAACAG
AAACCTGGTCAAGCTTCGGCTTCCACGACAGGGTATGGTCAAGCAAATGT
ATCATCAGATGATCCTAATGTATACCTTGGTCCTTCAATGAAAGATGTTG
CTGATAAGAAGAGTAAACAGCAAAAGCAACATGGTctatctaaagatatt
tcagaAAACGACAAAGATACTGCAATTAAGGAACGACTGGAAAAACTAAA
GGAAAAGAAAGGTTTAACTTATAAATTGATTATGTCACTTAGCTAGATTG
CGCAGAAATCAGTCTCATAGTGCACATATCCAAAACAATTATGACTCCta
cacactttttaataaatGAACAGAAATGAATACCGTATTACGTCGAGAAC
GCCCGacgtttaaaaaatcttttggatttaaaaaaagaagacgtttaTGT
TTATGTGAATTGGAACCTTGTTTTgctttttcgttttctttacaGTTCAA
ATAGAATAGTATGCTAATTTAGAGTCTAGAGatgtcaaaattggtcaaaa
gtaGTTTGATTAATTTGTTAATGCATATTTAAGTTTAAAGAACAACAATC
TACAGTATTCCAAATTTTGATTTATCTTCAAAACTCGATTGTCCCCATAA
TTCCTTGCCTTTCTGCTCAACTATTTTAGAACCTTCAAAGCCAGTTACAG
ATTCAGATCTTCACCAGCGCTTCAATAATTTAGCAGGAAGACAAGCAGCA
AGTTCATCAGCAAATAAAGGCAATGTATGTAGATATCGGTATTTTGTTCA
CAGGTAAAATTTACGATGAGGTGGTGGCTTGCACAAAAAGGGATTTCAGT
ACCTCTTTAATGAGAAAGTTCACAAGTTATAGTTAACAATGAAAGGGAGT
GCAACAAACTATTTGTAGGGTGAAAATAGggtaagaaaatcaaaattagt
gATCTGAGAAGCATTTTGGTAACTCTTGTCATTTGGCATGTATCAAAAAC
ACCTATTGTTGGGGGAAACTCCTAAGTACTATAGACCTTAGTAACTTTTT
ACTTCATGACCATGAAAATCTTATTATTGTGCAAATCTTCAGATTTTGCA
ACCACAGCCTCGATTAACAGAAGAGGAACAGATGTTGCAGTTGATGAAAG
AAACACAGGATGAAGTCAAGTTGGATGATCGATTTGATGAAAGTCAAGTA
GGAACAAGAGAAAAACTgagtaaagatattcaaaatatgGAAGATCGATT
TTATAAGTTGAAAGATCAAGACCCTGGTAAAATAattgttttaaacattt
tcttctATTTAATCATATCAGTCGTCTTTGACAGCTTCTTGTTTTGAACA
AAATCTGtataattttcttaattttctacTCATACAtttttttACCCCAA
CAAATAACATTTCTGTATGCATCTTAATTGGGCTTTAGACCTacattctt
caaaaatatggtttcaaaaatataaactaCATGGACTAATCAAAGTTTGA
ATCTTTCAAAAAGGACAGGAACAATGAACATTTTATTGAAGTGTTATTCT
CTCTAATGCTAAAAAATgacttaaattaaatttttctaccACCTTCGAAG
ACGAGGtacgaaaagaaaaagaacgTTTAAAAGAAGAGCAATACAATGAC
AGTTCTGAAGATGAGGACGAAGCTATGAAGAAGATTCTTCGAAAGGTTTG
TCATACAAATAGATGGCAATCACTTATGTTGTGATATATAAGATTATATT
ATAACTATAAAATTCAGACACGGGCCTTCTTGCTTTTATTGTGTGATGAT
GCAAATTCTGCTCAAAGttataattcaatatttaatatttaataacGAAA
ACCAAAAATATCCATATCCATAATATCCATATCCCATAGTTTTAAATCGT
AAAATAACTGTCATATTTTTGACCAATTATTATTGATTATTTGAATACAA
GTGGACTCTCGCTCTTCTAaaattcgaacttattcccaCTCCCAAGGGCG
GAGAAACTCTCTTCGAATATTTTCTATAATGCGAACAAATAAGATCCCCC
AATCGagctcgaattagcgagagtcaactctTAGGAACAGAAAATTTGCT
TCAAAACTATTTCCCTTAAACTCACACAAAAATTTTATCCTTAGGCGTTG
GCAGAATCACTCCTGGACGATAAAGTTAAAGAAGCTGGGCATGGTATTAT
GATTTCATAAATTGTTACtcgaatgaaaaaaagaaaaggaagaagcaTTG
TCGTTAtagagataaaaaaaaatcaaaatccagATTGTATTTGTAACATG
CGAGTTGCTATTTGCAAGTTGCGAGtttgcgagttgcgagttgctatTTA
ATGAAATAAAAGCACGATTTGCGAGCTGaaaaatgcgagataaaaaattc
atttaaaaccttaatattttaaaatccattttttcattttttcatttttt
ataggTGACGTGATTGCGAAGGCAAAAATTAGCTCTAATAAGGTAAGTAG
TCTTCAAAGTTGGTATTTATTTTTGAAGGATCACCTAAATAACTGGTAGT
CAAGAGTCCTAGATGTCACTATCACAATCCTAGGTTTAATGGCTTTATAT
TTTTgctctcaaaatattttgaatttaattttcacTGGTGCAACTTTCTC
GTCTGTAGACAGAAATCCATCCAGTTGAGaattttttgctttgattttcg
TCCCAATTGTAAATCCCGACACGGAAATTATAAACTGTTTGAATAGTTTT
TAAACTTTCCGTTTCGATTTATCAAAGGTGGTTGGAACCCTGGCCTTTTG
TAAGCCATTTTTATTAAGATATCACGACCATTTAATTGAGTTTGATCTCT
TCAGTGGTAATacagggaagaaattttggtgggaagaaattttgcggaat
ttaatttcgcggttgagagaaTTTTTCATGTCTACAAAATAGCCTATTTT
gtcctaaaaagaccaattttagaggtgattttttaaatccagagaatatt
cgtgtttcgcggaACTAAATTTCGCAGATTCGTCCGCAAAgaaaccgcga
aaatttctcCCCATGTAAATTTCTTCCCTTTGAAGGTAACTCTGAAAGGT
TTATTTTTCGTCCTCTTTCCAGCCAATGACGTCTCTTGGTGGAGCACCAG
TAGAAGAGGATGATGATGAACTCCCTTGGTGCTGTATATGTAACAATGAT
GCAACCATCAGATGTCATGATTGTGATAATGACCTCTACTGCAAACGATG
TTTCAGGTACATTATTATCAGAGGacattttttgaagaatggGTTTATTT
CAAGggattattcctgattattcgTGGCTCAACTTTTTGAAAACCAAGCT
agtttttttcaggatttcctaTCCGCCAGTGATAAGACTAAGACAGATTT
TGACAAAAACCCATGTATAAAGTATGCAAGTACATTTGGTTacgttgaat
tttgattttgttgttcaTTTTTAGGGAAGGACATGATGATTTCGACATGA
AAAATCATCGGAAATCAACATATCAGAAAccaaagaaaaaacaatga Coding sequence (CDS) from alignment at sc0000255_pilon:439534..443980+ >XLOC_033189 ID=XLOC_033189|Name=XLOC_033189|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2130bp|location=Sequence derived from alignment at sc0000255_pilon:439534..443980+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCATGTTTTACTTGTACCTCAAAATTTAGTTGGCGAAAAAGAGAGAT
GTCATGTTTTACTTGTACCTCAAAATTTAGTTGGCGAAAAAGAGAGCATG
GATGTCCAAATTGTGGAAAGGCATTTTGTAAAGATTGCTTGAACTATACA
GCATCTGTCAAAAGGCTTGGTGGTAAACAAACCAATGTTTGTGTGGATTG
TCATAAGAAGTTAAATGTCAACATGGATGTCCAAATTGTGGAAAGGCATT
TTGTAAAGATTGCTTGAACTATACAGCATCTGTCAAAAGGCTTGGTGGTA
AACAAACCAATGTTTGTGTGGATTGTCATAAGAAGTTAAATGTCAAGACA
GTCCAACAGAAACCTGGTCAAGCTTCGGCTTCCACGACAGGGTATGGTCA
AGCAAATGTATCATCAGATGATCCTAATGTATACCTTGGTCCTTCAATGA
AAGATGTTGCTGATAAGAAGAGTAAACAGCAAAAGCAACATGGTctatct
aaagatatttcagaAAACGACAAAGATACTGCAATTAAGGAACGACTGGA
AAAACTAAAGGAAAAGAAAGGACAGTCCAACAGAAACCTGGTCAAGCTTC
GGCTTCCACGACAGGGTATGGTCAAGCAAATGTATCATCAGATGATCCTA
ATGTATACCTTGGTCCTTCAATGAAAGATGTTGCTGATAAGAAGAGTAAA
CAGCAAAAGCAACATGGTctatctaaagatatttcagaAAACGACAAAGA
TACTGCAATTAAGGAACGACTGGAAAAACTAAAGGAAAAGAAAGAACCTT
CAAAGCCAGTTACAGATTCAGATCTTCACCAGCGCTTCAATAATTTAGCA
GGAAGACAAGCAGCAAGTTCATCAGCAAATAAAGGCAATAACCTTCAAAG
CCAGTTACAGATTCAGATCTTCACCAGCGCTTCAATAATTTAGCAGGAAG
ACAAGCAGCAAGTTCATCAGCAAATAAAGGCAATATTTTGCAACCACAGC
CTCGATTAACAGAAGAGGAACAGATGTTGCAGTTGATGAAAGAAACACAG
GATGAAGTCAAGTTGGATGATCGATTTGATGAAAGTCAAGTAGGAACAAG
AGAAAAACTgagtaaagatattcaaaatatgGAAGATCGATTTTATAAGT
TGAAAGATCAAGACCCTGATTTTGCAACCACAGCCTCGATTAACAGAAGA
GGAACAGATGTTGCAGTTGATGAAAGAAACACAGGATGAAGTCAAGTTGG
ATGATCGATTTGATGAAAGTCAAGTAGGAACAAGAGAAAAACTgagtaaa
gatattcaaaatatgGAAGATCGATTTTATAAGTTGAAAGATCAAGACCC
TGACGAGGtacgaaaagaaaaagaacgTTTAAAAGAAGAGCAATACAATG
ACAGTTCTGAAGATGAGGACGAAGCTATGAAGAAGATTCTTCGAAAGACG
AGGtacgaaaagaaaaagaacgTTTAAAAGAAGAGCAATACAATGACAGT
TCTGAAGATGAGGACGAAGCTATGAAGAAGATTCTTCGAAAGGCGTTGGC
AGAATCACTCCTGGACGATAAAGTTAAAGAAGCTGGGCATGGCGTTGGCA
GAATCACTCCTGGACGATAAAGTTAAAGAAGCTGGGCATGgTGACGTGAT
TGCGAAGGCAAAAATTAGCTCTAATAAGgTGACGTGATTGCGAAGGCAAA
AATTAGCTCTAATAAGCCAATGACGTCTCTTGGTGGAGCACCAGTAGAAG
AGGATGATGATGAACTCCCTTGGTGCTGTATATGTAACAATGATGCAACC
ATCAGATGTCATGATTGTGATAATGACCTCTACTGCAAACGATGTTTCAG
CCAATGACGTCTCTTGGTGGAGCACCAGTAGAAGAGGATGATGATGAACT
CCCTTGGTGCTGTATATGTAACAATGATGCAACCATCAGATGTCATGATT
GTGATAATGACCTCTACTGCAAACGATGTTTCAGGGAAGGACATGATGAT
TTCGACATGAAAAATCATCGGAAATCAACATATCAGAAAccaaagaaaaa
acaatgaGGAAGGACATGATGATTTCGACATGAAAAATCATCGGAAATCA
ACATATCAGAAAccaaagaaaaaacaatga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000255_pilon | genome | sc0000255_pilon:439534..443980 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 994-1065:4376 |
| Aaloc | 859-990:4023 |
| Aaloc | 823-858:3357 |
| Aaloc | 772-819:3045 |
| Aaloc | 679-771:2503 |
| Aaloc | 493-675:1993 |
| Aaloc | 400-492:1582 |
| Aaloc | 175-396:939 |
| Aaloc | 49-171:621 |
| Aaloc | 1-48:1 |
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