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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000265_pilon:23869..28428+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033095 ID=XLOC_033095|Name=XLOC_033095|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4560bp|location=Sequence derived from alignment at sc0000265_pilon:23869..28428+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAACGAAAACGCAGAGAAACATCGGAGAGAGACGATTCAAAGTTATA
CAGACCACGCCGGAATGTGAACTTGGAACCAGAGACTAGAGGACCATTTT
ATATCAAGCTTTTTATTCTTATGGATACCAAGTTATATGACATGTACGAT
GGCAAAAGGGATGACAAAGTATTCAAAGCAAGGATACAAAAGATAGTTGA
CTACGCAAATACTGTTTACAGAAAATACAACATCCGCATGTCAATAGCCA
AGTTTTTAGATCCACCAAATGACCACCAAGTACAATTCACCTCAAATTCA
GGAGATTACCTTTCGCGCATCTCATTACACTTTGCAAGTACACGGAAAAA
TAAGTCATTCAAAGAAATAGATCACCTCCACTTTTTCACTGGTCACCATT
TTGATGATGGTAAGTTCATTCATTCAATCTATTTACATGCTTTTTCTAAG
AACAACTTCTAAGAACAGGTAAGCTTGAAGGTCTATTTCGGCCGGAGCCC
TACAACAAATCTAAAATGACCctgtatatttcaaaaatagccAAGCGTCt
tcaattttaagctttttaagTCTACCACTGAATAAAGTAAGCataaaaat
tacattttcagAGAATTAAAGCCTGGAAATCGGCAAATAAGAACAAAGCC
TCAACCAAAATTTAATGTTTCTTATACAGAAGCGTGTTATACAGCATAGA
GCTTTCTATACCATGTGAAGTCAAAGAATGAAAGACAGTCTTTGGGATTT
TAAGGAAGTACATAATCAGAAAGTATATACCAGGTGTaataaatattcta
aaaaaagtctaaaataatACTTATATGTCCGATTAAGTATGAAAAAGCAG
TTTACACAATTTTTAACCATaaaaaaaCGAAGAACtaaccattgacttcc
aagcccgaagggctggaCTCGAGattcctggatgggaaatgaagccactt
atttcccatccagaacgtcAGTGcatagtttttacacaaacgccagattg
aaagcaaaattcgtcactagatttaaaaaaaatacattcctcaaaaacaa
aggaaccactagctACAATCGGTCGTCATGATTAAGGTGcgtttttggat
gttttaacaACTTCGGCCAAGATTTTTGATGCGTATTTAACGAACGAACT
CACAAAATAAGTTTACATATTTAATCTCAATATTCAATCTAAagaaatta
caccaacccaaagtcccgaggtcccaaagtcccaaaatatcaaatttttg
attaaaaattacactAATATctgaagtcccgaattgaaatatatcaaaac
tctaccagaaaaaaaaattaaaccaaaCTAAAGTCCCGAAGTCctgaatt
gaaatatatcaaatttctgaGGAAATAAATCACGCCAACCCAAAGTTCCG
AAATattaaatttctgaaaaaaaatattacaccagAACATTGACGTataa
tgtctttaaaaatatttacttgTGATAGTTGTTAGTTACATGAAGGTATT
GCGTGGATGAAGAGGTGGGTTGGgcgttcaaaaaaaaaaaagcgaaGTAG
AGCTAATGGATAAAACAGACAAGGGTGTGATTTTCACAAAGAGAAGGGGT
GGAAATATATGAAAAGGTGTGAAGTGAAACTCAAGTAGAAAGAGGGCCGG
AGGAAATGACTGATTGATTGAATTTGATGGGCAGGGATGAGATTGATGAA
ATCTCGGATAAAATAAACAAGGGTGTAATTTGAAACTCATGTGGAAAGAG
GGACAGGTTTAGTGAATGATAAATTGAACACAAGGAGACAGGGATGAAAT
TGATGACAAAAACAAGGGTGTGATTTTCACACAAAGAACGAGTGGAAATC
TCTATCAAAAGGGGTGGGGTGAAAGAGGAGCAGAGTGATGAATGATAGAT
TGAACACAGTGGGAGAGGGGTGAGATTATGAAATGGAGCAAAGACACAAA
GAGGAAAACTATTGGCATAAAACTCAAGTAAAAAGACAGAGGTATACACG
AAGACAGGGGTGAGATAGATGCAAAGAAAGGGGGAGATAGGGGTGGGACA
GATGTAAAGGGATGTGGCGGAGATATTACAAAAGGAGTAGGGGTAAAAAC
AACTTAAATAAGACGAGACGGGGTGAATAGATTTCTCtctcagaaatttg
atatatttcaattaggcgagaccaatttaatttgttgttctacggacaga
tcgttagaaaaatatgggtcggtcggtcggcagaataagaataatttttt
catttatcagggctGGTAAGGTACCGAGAAAGTAAGACAACAAATGTCAA
TACAGTGCTTATGGACATAAGTCAATGTATATttcaatttgttaaaattt
ttttttttaaacacacTACCGCCAGTTTCATGCTTTTAATGCGACTATCA
GGTATAAAATTCCTCTGTACAAGATGGTATAAATACTTATtctataaaaa
agtaaaaatgtaaaaagttcaaaaaaagtgattaaaaatgctcttgggag
atacaaaacaataaaaaggtaaaaTTACGGTAGTTATTAGTCTGGAGGGG
TCAGAGCCCttgaagggacataaaagtagtaaaatgtaaacattgcgcga
accacgggtcattaaagagaacaattaaaatcacgtgtccaaaacaaact
tttaaacaattgaacaatcaaaattagctaTATTtgggttgattttttat
tttgccatGTGACATTTAATTTGATTTGGTATCCGCacaatttgtttaca
aatttcgcaagtagtGTTACGTccctttaaaacaaattttcagtCGATGA
TGGCTTTATATCCttggtcgtgttcacactacagaccttccttaataaaa
atgtagttaggagaatcttttgttgactacaatacagaacgtgcatttaa
caaagagtcgaacgcgtagtattgtaatttttaatcgatcttccttaatt
aagagtcgtaacctctattgtcttaagggtagggtagaggcttcccttaa
aacaaaagattttattaaggaagcataaacaaagaatgcgtgcagtgaac
aaaaagttttacgatttcaaaaacgaatgaactgaggaaaaaattagaaa
tagtgcaaacggtgttgttgatgtgtaagatgaatgcagttaatgagtaa
aaccattagaacaaTTATGTTTGCGGGTTTTaagtgatgtatggatacca
atatcaaccaatcacaggtgaaatcgaaactctcaataaaaaatcaacca
atgagaagcattaagcaaaatcaattaccgtgttataatagatctcgtga
acctacaaagaactgtaataaaccagtgtattcatccatcataaatctct
ttgtttaactttgatagatttaattaaggaaaccttccagtgtgaacgcg
cccCTTATTTCTATTTTCCTTCAGATGTAATTGGGAAAGCGTACTATCGA
TCAATGTGTGCACCCTCCACCTCAGTGAGCTTTTCATCTGACTCGCCACA
TTGGGACGTGCAACGGACGGCCTCTATTTTTGTGCACGAGATAGGTCACA
GTCTTGGTATGGTTCATGATGACCCTACCAATTGTGTTTGCAAACATTCT
AGAGGTTGCATCATGGCTTCATATATTGTAACACCGGCGCCAAGATATTT
TTCGGATTGTAGCGAAGAGGGACTTTTTAAGTAAGTATATGATGAAGTTG
GTATTTGTAGACATTAAAGATTAGGGAAAAGTATATTGTGAAACTTGAGC
GGCTTATGATTTTACTGTGGGTAGCTAAATCAGATTGATGTTATTAAAGC
CATCTCTATAAAAGAGATAAATAGATACAGTTTTCTTGCTGATATATAAT
GTTTTGAATCTTTTTCGATATTGTCATTATTCACACTCTAATTCACATTT
CAAAATTTCCGTCAATTATTGATATTTTATGGGTTTTGATAATGTACTAT
AATGGCTTGATTTATTTTCAGGTATCTGGACTCATGGAGAAGTCAATGCC
TTCGGGGAGATGGTTCTCCTGTTCCAGAAGAACGATTAGTACCCAGGCCC
AAGCCGGTGTGCGGAGACGggaaattagataaaaatgaagaatgtGACTG
TGGAATCCCAGGTTTTTGTATGAATCCATGCTGTAACCCTTACACGTGCA
AACTAACCAAAGGCTCGGAATGCTATGAGGGTGGATGCTGTAAGCACTGC
AAGTTGAAGACAAAAGGTACCGTTTGCCGACAATCCTTTGATGACTGTGA
TCTTCCCGATATGTGCAACGGTCAATCGCCAATTTGTTCCAACCTTCACA
AGGAAGATGGAACTGCGTGTATTTACAGTGGAAAATGTCGTGGAGGAAAA
TGTAAATCAAGGACAGTACAATGCGAACGTATTTTCGGTAAAGGTACCAT
GAACGGACCTTACACTTGTTATACTCGTATCAATAAAGTTGGTAAAGATT
TTGGTAATTGCGGTAACAAAGGATCAGTATATAAAGCGTGTTCGCAGGCA
GATGCTGAATGTGGCAAACTACAGTGTAAATCACCAACTGTCAATGTAAT
GCCGATAAGT Coding sequence (CDS) from alignment at sc0000265_pilon:23869..28428+ >XLOC_033095 ID=XLOC_033095|Name=XLOC_033095|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2508bp|location=Sequence derived from alignment at sc0000265_pilon:23869..28428+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAACGAAAACGCAGAGAAACATCGGAGAGAGACGATTCAAAGTTATA
CAGACCACGCCGGAATGTGAACTTGGAACCAGAGACTAGAGGACCATTTT
ATATCAAGCTTTTTATTCTTATGGATACCAAGTTATATGACATGTACGAT
GGCAAAAGGGATGACAAAGTATTCAAAGCAAGGATACAAAAGATAGTTGA
CTACGCAAATACTGTTTACAGAAAATACAACATCCGCATGTCAATAGCCA
AGTTTTTAGATCCACCAAATGACCACCAAGTACAATTCACCTCAAATTCA
GGAGATTACCTTTCGCGCATCTCATTACACTTTGCAAGTACACGGAAAAA
TAAGTCATTCAAAGAAATAGATCACCTCCACTTTTTCACTGGTCACCATT
TTGATGATGATGCAACGAAAACGCAGAGAAACATCGGAGAGAGACGATTC
AAAGTTATACAGACCACGCCGGAATGTGAACTTGGAACCAGAGACTAGAG
GACCATTTTATATCAAGCTTTTTATTCTTATGGATACCAAGTTATATGAC
ATGTACGATGGCAAAAGGGATGACAAAGTATTCAAAGCAAGGATACAAAA
GATAGTTGACTACGCAAATACTGTTTACAGAAAATACAACATCCGCATGT
CAATAGCCAAGTTTTTAGATCCACCAAATGACCACCAAGTACAATTCACC
TCAAATTCAGGAGATTACCTTTCGCGCATCTCATTACACTTTGCAAGTAC
ACGGAAAAATAAGTCATTCAAAGAAATAGATCACCTCCACTTTTTCACTG
GTCACCATTTTGATGATGATGTAATTGGGAAAGCGTACTATCGATCAATG
TGTGCACCCTCCACCTCAGTGAGCTTTTCATCTGACTCGCCACATTGGGA
CGTGCAACGGACGGCCTCTATTTTTGTGCACGAGATAGGTCACAGTCTTG
GTATGGTTCATGATGACCCTACCAATTGTGTTTGCAAACATTCTAGAGGT
TGCATCATGGCTTCATATATTGTAACACCGGCGCCAAGATATTTTTCGGA
TTGTAGCGAAGAGGGACTTTTTAAATGTAATTGGGAAAGCGTACTATCGA
TCAATGTGTGCACCCTCCACCTCAGTGAGCTTTTCATCTGACTCGCCACA
TTGGGACGTGCAACGGACGGCCTCTATTTTTGTGCACGAGATAGGTCACA
GTCTTGGTATGGTTCATGATGACCCTACCAATTGTGTTTGCAAACATTCT
AGAGGTTGCATCATGGCTTCATATATTGTAACACCGGCGCCAAGATATTT
TTCGGATTGTAGCGAAGAGGGACTTTTTAAGTATCTGGACTCATGGAGAA
GTCAATGCCTTCGGGGAGATGGTTCTCCTGTTCCAGAAGAACGATTAGTA
CCCAGGCCCAAGCCGGTGTGCGGAGACGggaaattagataaaaatgaaga
atgtGACTGTGGAATCCCAGGTTTTTGTATGAATCCATGCTGTAACCCTT
ACACGTGCAAACTAACCAAAGGCTCGGAATGCTATGAGGGTGGATGCTGT
AAGCACTGCAAGTTGAAGACAAAAGGTACCGTTTGCCGACAATCCTTTGA
TGACTGTGATCTTCCCGATATGTGCAACGGTCAATCGCCAATTTGTTCCA
ACCTTCACAAGGAAGATGGAACTGCGTGTATTTACAGTGGAAAATGTCGT
GGAGGAAAATGTAAATCAAGGACAGTACAATGCGAACGTATTTTCGGTAA
AGGTACCATGAACGGACCTTACACTTGTTATACTCGTATCAATAAAGTTG
GTAAAGATTTTGGTAATTGCGGTAACAAAGGATCAGTATATAAAGCGTGT
TCGCAGGCAGATGCTGAATGTGGCAAACTACAGTGTAAATCACCAACTGT
CAATGTAATGCCGATAAGTGTATCTGGACTCATGGAGAAGTCAATGCCTT
CGGGGAGATGGTTCTCCTGTTCCAGAAGAACGATTAGTACCCAGGCCCAA
GCCGGTGTGCGGAGACGggaaattagataaaaatgaagaatgtGACTGTG
GAATCCCAGGTTTTTGTATGAATCCATGCTGTAACCCTTACACGTGCAAA
CTAACCAAAGGCTCGGAATGCTATGAGGGTGGATGCTGTAAGCACTGCAA
GTTGAAGACAAAAGGTACCGTTTGCCGACAATCCTTTGATGACTGTGATC
TTCCCGATATGTGCAACGGTCAATCGCCAATTTGTTCCAACCTTCACAAG
GAAGATGGAACTGCGTGTATTTACAGTGGAAAATGTCGTGGAGGAAAATG
TAAATCAAGGACAGTACAATGCGAACGTATTTTCGGTAAAGGTACCATGA
ACGGACCTTACACTTGTTATACTCGTATCAATAAAGTTGGTAAAGATTTT
GGTAATTGCGGTAACAAAGGATCAGTATATAAAGCGTGTTCGCAGGCAGA
TGCTGAATGTGGCAAACTACAGTGTAAATCACCAACTGTCAATGTAATGC
CGATAAGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000265_pilon | genome | sc0000265_pilon:23869..28428 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 667-1254:3973 |
| Aaloc | 412-663:3427 |
| Aaloc | 1-408:1 |
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