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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000265_pilon:155256..159863- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033058 ID=XLOC_033058|Name=XLOC_033058|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4608bp|location=Sequence derived from alignment at sc0000265_pilon:155256..159863- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCTTAAGATATGTTTATTATCATATTTTGTGGTAGTAGCAATGCT
TCATAAGTTCTCACAAGGTATGTTTGAGTAAATTTCTATCAATTCCATTA
TCATCACTCAGATTTCAAAAATATTTAACCGCAATATTATACATAATCGT
CTCTGGAGCGAAACAGTCTGTAATGTTTTAATTCTTTAAAGAAAAATAAA
TTTTGACCGCAATATTATATCAACACCCTTAAACACCCTAGCGCCATAAA
GGAGTTGGTTACGATTTTATTTGGGTCATATGGTTCTAAATTTCTGTATT
TGTGAGCTAGCCGATACCTTTATACATTTTTTTGCAGTGTTCCAATTAAA
GTTCGATATTGATATCATTGATCATAGAGGACTATCCGAAACTTCTTTCA
GTTCTAGTAACGGCGATTGACGTCAAAAATGTCCCGCTTTTTTTGTATTT
TTGTCCGTCAATGACGAGCGTCTTTCTTTTTAATTTAAGCGATGAGTGTG
GAAGATATGTGGAAAGTGATCGAAGACGGTGACGCTGAACGGGAAAAGAA
ACATTTGCCCATTGACGGGGCCGCTGACCGTGAGATTGAACCAGGTAACG
TTTCACATTCACTCAACGTTCATATAACGTTAAGACATGCCTCCGCGAGG
AGGCCCTCAGCGGTTTGTGGTTTGGTCAAAATCAGTTTGAATACTGAAAG
AATACAATTATTAGCACATACTTAAGTTTTCCTCGATATGATTCTCCCTT
ACATCTACTTGTTTCAAAGAAACGCCCCTCCTAGAGGGGAGGCGTTTATT
CGAATGGGGCGTTTATTAAAAAATTTTCTTTTATGGAGAAGCGCTTATTC
GAGGGGTCGTTTATTCGAAGTGGCAACGTGATCTATGGTTTCAAATATCA
TGATCGATGGGAAATGACGTATTCAAGGAGTCCTCCAAGGGCCTCCATAA
GCGCACTGCGATCGCTTCTTTGCTATTGGTCGGAAGAAAAGAAAAACACA
ATGACTAAATGTTATTCCACTTGGACTGACGTAACACGTGCTATTTTTAT
GACGTTCTCCGAACAGAAAAGGTTGGATATAACAGAAGATATCGCATGCT
CATTAATACGGGCCTTTATATAGGTGCCATGGACGTTAGCTGTCTCTGTA
TTGACGGGAGGTTGGTTTCTAGACTATAGTGTACGTTATAATCTGAATCC
ATTTTTTTGTTCCATAGGGCACGAGCATCCAAAAATCATCGAATATGATA
TCTCGTACAACGAGACAGAGGAGCAAGCGAAACGCGATTTCATTGACAAA
AGAGGATCTGATTTACCCACCCTAATCTCATGGCATCTCTCCTTGTGGAG
TACTCGTATAGTTCCGTGGGTGCTTGACCACTCAGGAGGGTATTTCTCAG
GTTGCTCCTCTTTTTATTTGTTTAAAACACCGGTACACCAAATTTCTCAA
GATGAGCGCCCTGCACCTGAAATAAAAAATCTCCCCTTCAGTAAAAGCCT
TGCCCTCAAAGAAAATGCACCTAAATTCTCGAAAACCTAAAGATCATTTT
ATTTGTATGAATTTGTATGGATCTCATTTTTAATTGATTGATTTGTCGAC
AAAAATTTCCGTCACTTGCCAATCTCGTAACTTTTGCCAACGATTTTTCC
AACAGATCAACGTCAGTTTTTTAGAGGAATTAAGATAGGAAAACACCAAT
AAACTGCCATTAAGTTTTAGACGAAAAAATTTTTAAAGTAACCTAAATAA
TTCGATGAAAAATATTCCTTGCGGCTAAAATTAATCGACAGTCAAAAAAT
AAGTGTTGTCATGTGAAAATTCATTAAATATCACTGTCGCAAAGTGTATA
ACATATTAAAATTCATCATAAATCGGTAAAAAAGGAAAGAAGGAAATTCT
CTACCCATAGGGTAATATTATCCTGTCAATGGTATGAAAAAAACTTCCAG
GGCTATAGTATCGGTTATTTGGATTTTCGCGGACTCGCACTTTTTTTAAT
ATTGTCTCTGATTTCCTTTTAGTTGAGGAGCAGAAAATAATTCAAGAATC
ATTCGACCAGATTTCGGGGAAAGTTTCATGTTTATCATTCCGTCAAAAAA
TATCGAGTGACAAACAATGGCTTAGAATCTATAAGGGTGCTGGGTAAATA
CTTACTTGTACTTGCAGCTTTAGCCGGATCATTAGCGAGTTTATGTATTC
GAGATAAATCGAGGGGGACGGTATAAAGCAAAGTTGACATGGGGCTGAAA
TCGACGTCCACTTTGCTCGACGACGGTAAAAACACCAAAATACCGTTGTC
TGTTTAGGTGAGCAAAGGCGATATAGAGCCGTACATCAACTATCGACTTT
GTTTTGTATCGATTTCACTTACCGTAGCCCTCGATATTCCCCGATACATA
AACTCGGTATTGTTGCGACGACAGTCGGCGATCAACGTTTGTATGATCAT
GTTCCCCTTTCTTCTTCAAAGCATCTTTATAAAATCGATCCTTAGTGACA
TTAAGCTTCTTTATAACTTTAGCCTCGAGTGACTCTATTGGACGACCTTG
ATTTGTTCTTTTGTTTTGTTGTCATCAAACAAAAGTCTTTTTGTCAGCGA
ACTATTTTGTTGGCGAGCTAAGTGTCCCAGGTAGCTGGTTTGTTGTTTAA
GGACGAACCTTTGTGTCAGAGGTTTTGCATCTTTGAAGAATCTCATGATT
GGTCATCATGTATCTAAATTCTTCACGTTTGCATCCGTTTCTCATAAGTT
TCCTAACATTGAAACGTAGATTGAATTGATCCTTTGCATTTGTACCTCTA
ATGATTTACATATTTAACATCAACATAAGGCAGTTCTTGTCAACTTTTTT
ACGGGGATTTTTACAGGGCATAGGCGTAGCGAGATACCCTACATGGTGTC
CCTAATAAAAGTATCGAGTTTGAACATGCGATTGAGTAAAAAAGTTTGTG
TGTGTTATCGCTAAAATATAAGAACGTTCTCCATCACATAGGCTCATTAC
AAAAGGTAGTTACAACGTATAAATTAATCAATAGCCCTTTTACTATTCCC
CTGTTGCATAAATGTACGTCTTTAAAAATTCCATTTTTATTATTTTCATA
GTTTTACATACGATTCTTTACAAACATGTTTTAATTGTTGCGTTTTTCTC
ATGATCGTAATTTCGTTGCATTTGTAAACAGGCAGAGTATGTTTTTATTG
TTACGTAATGACAAAGAAAAAAGAGGGAGAGCTTAAAATACAATTTTGTG
AATACACACTTAAAACTTTCTACTCAATCGCATGTTCAAACTCGATACTT
TTATTAGGGACACCCTGTATAAAATCTATGGACGAGAGCGGTTTTTACGA
CACTGTAATTATTGCCTTTGTTTTTTTTTGTTTTTTTTTCTTTATTGAAA
CAAAGACACGTGTACACTACGAACATATATTACAAAACATTACTTAAACA
TAAAATATAGTCCCTCCTCCCGCTAGGAACTACTCTATTGTCTCCCGAAT
AGACGCCCCCCGCTCTTATTAAGACCCCCCCCGCTAATAAAATTCGAATT
ATTCAATATTTTATTACAGTGTAGATAGACCTTAAGCTTGTTAAAATTGT
CCTTTTTGTCAGTATTGGTTCTTATTTTATTACGTGTTCATCTGTTAAAG
TTTCTTTTTTGTTGTTGAAATTTATATCAATTTAAAAAAATCTGTCTTCA
AATTACCACCCCCCCCCTTCTTTTTCCACCCCCTTCTTATTCCACCCCCC
CCCCCCCGCTTATTAGAATTTAGAAAATTTTCCTACCCCCCTGCTTATTC
GGACCCCCCCCCTCGTCTATTCGGGAGACAAGAGTAACGTTATATCGCCA
GTTTCATCAAAAGATATTGAATATGTCATTAACGTCTGTACTCCCTCGTA
AATTTTGCAGGGATCTCGCTACGCCTATGCAGGGAGTTAAAATAATCTGA
TCTCGGGTGAGTTAGGGCGTGTATAGATTTAAAAAAATCACAAATCCCAA
ATTTGCGATCAATAACACCCATTCTCAGGGATTCACTTATGGATTTTTAA
TTGACCTATACCTTAAGGTTTCAGGATCCGTAACGGATTGTGACGTAATT
AAATAGAAAGTGTGAATTATGACGTCATAAATCTTAAAATAGCTCTAACT
CTATGTACATGTCGAATCTTTGTCAAATTTGGACCAAATGCATCTAAATG
ATGCCTAACTTTCCAAGTCAAAATGTTTTTTAAGATTTTAATGACGTCAG
CAAAAAATGCAAAAAATCGAAAAATGTTTAAAAAAGTTACAATTCAGTTA
GATGCATCTTTGGTTCAAATTTGGGAAAGATTGTACACGTACTTTTAATA
TTATAGCGATAATACAATTCATGAAGTCACCAAATTCGATCAAATTATGA
CGTCATGATTACAATTTCTTATATTATAGATTTTAAGGGGTGAAAATTAA
TTAGGTTACAACCTGATTACAACCTGTGAAATCTTTCATCTTACTTTATT
TTCAGATGCCATTCAGGCATTGGTCGAAAATATTGGACAACATCTTCTAC
CGATGTTTCGTTGGGAAATGGCTGTATCAAAACTTCCATTGTTGTACATG
AGTTCCTA Coding sequence (CDS) from alignment at sc0000265_pilon:155256..159863- >XLOC_033058 ID=XLOC_033058|Name=XLOC_033058|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1158bp|location=Sequence derived from alignment at sc0000265_pilon:155256..159863- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCTTAAGATATGTTTATTATCATATTTTGTGGTAGTAGCAATGCT
TCATAAGTTCTCACAAGATGAATCTTAAGATATGTTTATTATCATATTTT
GTGGTAGTAGCAATGCTTCATAAGTTCTCACAAGCGATGAGTGTGGAAGA
TATGTGGAAAGTGATCGAAGACGGTGACGCTGAACGGGAAAAGAAACATT
TGCCCATTGACGGGGCCGCTGACCGTGAGATTGAACCAGCGATGAGTGTG
GAAGATATGTGGAAAGTGATCGAAGACGGTGACGCTGAACGGGAAAAGAA
ACATTTGCCCATTGACGGGGCCGCTGACCGTGAGATTGAACCAGGGCACG
AGCATCCAAAAATCATCGAATATGATATCTCGTACAACGAGACAGAGGAG
CAAGCGAAACGCGATTTCATTGACAAAAGAGGATCTGATTTACCCACCCT
AATCTCATGGCATCTCTCCTTGTGGAGTACTCGTATAGTTCCGTGGGTGC
TTGACCACTCAGGAGGGTATTTCTCAGGGCACGAGCATCCAAAAATCATC
GAATATGATATCTCGTACAACGAGACAGAGGAGCAAGCGAAACGCGATTT
CATTGACAAAAGAGGATCTGATTTACCCACCCTAATCTCATGGCATCTCT
CCTTGTGGAGTACTCGTATAGTTCCGTGGGTGCTTGACCACTCAGGAGGG
TATTTCTCAGTTGAGGAGCAGAAAATAATTCAAGAATCATTCGACCAGAT
TTCGGGGAAAGTTTCATGTTTATCATTCCGTCAAAAAATATCGAGTGACA
AACAATGGCTTAGAATCTATAAGGGTGCTGGTTGAGGAGCAGAAAATAAT
TCAAGAATCATTCGACCAGATTTCGGGGAAAGTTTCATGTTTATCATTCC
GTCAAAAAATATCGAGTGACAAACAATGGCTTAGAATCTATAAGGGTGCT
GGATGCCATTCAGGCATTGGTCGAAAATATTGGACAACATCTTCTACCGA
TGTTTCGTTGGGAAATGGCTGTATCAAAACTTCCATTGTTGTACATGAGT
TCCTAATGCCATTCAGGCATTGGTCGAAAATATTGGACAACATCTTCTAC
CGATGTTTCGTTGGGAAATGGCTGTATCAAAACTTCCATTGTTGTACATG
AGTTCCTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000265_pilon | genome | sc0000265_pilon:155256..159863 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 478-579:103 |
| Aaloc | 358-474:2585 |
| Aaloc | 175-354:3390 |
| Aaloc | 70-171:4118 |
| Aaloc | 1-66:4609 |
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