|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:112555..114580+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033028 ID=XLOC_033028|Name=XLOC_033028|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2026bp|location=Sequence derived from alignment at sc0000049_pilon:112555..114580+ (Clytia hemisphaerica_ch_hm2_pilon)
atGAGAATACGAATGAAAATACAAACCATCATTtattttggaatgttttt
cggTTTATGTATTGTCTTTTATTACGCCCTCATTCACGCCACCAACCAGT
ACAAAGATCAACCCATAAACCAAATCCACCAATCCAAGAACGATTTTCCA
AAACACACCGATCCACCTTCAGAGCTAGACATCATAATGGATAGAGCAAT
GCAATGGGCATCACAAACCAGAGCACAGAAGTTGGCAACTATGCTACAGA
ACCCTGTTTACGAACGTCTTCAATTGAAAGATACAGTGCGCAAAAATGAT
GGAAGTGTGGTGAAAATCAAACGGAAGAAAGTTGATTTGCTATTGATTGT
TTCATCAGGACCAAGAAGGTTTGACCGGAGACAAGCAATTCGCCAAAGCT
GGTGGAAAGATTGCGTTCCTACCTCCAAGGtAACtctttttgttaTtttc
ttACGAACTAGACATTTTGAATATGTGAAATACACTTAGATAAGATTTAG
ATTATATGTGTGATCTCTCTTCTTCTAGCATTTGAATGCTTAGTTCGATC
TTTTTCTTGTAACCTGGTACCTGGTTTGAATCAATCCCTAAATCTTCTAA
AGAAGTTTATAGAGGTAGTGTAGTAGAATTAAATTCAATAAGGTATAGTT
GGAGTCCTGTGTAGGATTTAGAGTCATTTATTTCCAACATAAATTGCGTG
ATCTgcgtggttttcatacaaagaagaaaaataccTATAGAATTTTAAAA
GTGTAAaacgtgaaaacaaagaaagttctAGATTCAACCTGTCAATGAAG
CacaaattttaattcactttttcttgctcgGGAAAGGTTGACGATCAAAA
ATAAATAGCGGAGTTTTTAAAAATCGGGTGACAAGTTTTAGCGAGACTAG
ATATTCAAATTGCTTCTTTTGCTACTTTACCAGTGTCTCAAAGCGAAAAA
TGCATTTTCAAGTTTAGAATAGCCGTAATACGGGGTTCCCGAGATTATTT
CCCGCAACATTAATTAATTAAGATTAAATTTTCAAGtgaaaattttctgt
aaaatctgctaatttttgaaaaatgacagCTTACAGGGCCACTTTCAATT
GAATATTTCAGTACGTAAATTAAATCTCCCgaaaaattaatccgattaat
gAACTTCTATCTTCCGTTTAGGTTATCCCGAAATGTTGGTTTCTGACAGA
CTACCAGTATCCATCAGATAAGTATTATCAAAACAtaacgaaagaaaaaa
acacctaCAAAGATGTTTATTTACAACCGCTGCGTGGTGGAATCGAGTTT
GGGAAGCGTTTCATGTATCACATGTTATGGGCACTCATTCATTacgattt
caaatattttgtgcGAATAGATGACGATTATTTCCTTTGTTTACATCGTT
TGTTAAAGGAACTTCCCATTGCTCCGCCATTAAAGAATTTCCACTGGGGA
TACACCCATTGTATCCAAGAAATGATTAGACCTGAGGAGAGTCTTATTAT
GTTATCTAGAGATTTAGTTGAACGATTTTTACTTCAAGCTCCTCATGAGA
TCAGATGTCATCCGTGGGCTGATCAAATGATTGGAGTCTGGGTGACAGAT
ATGAATATATTAACTTTATTTCGTACTGACGATCGAGTACACCATGCCCC
TATTGTAGACAAATCACCTTATTTGAGACTGGAGaaaaaagtatgtaaca
agtATATAGCTATACACGGAACTTATCCCAAAGACATGAAACTATTTTGG
AGTCGACGTGGAAACCCGATTCAAGAATTCTCCTCCGAGAAAGATCGCGA
TAAAACTATTGGTAACGTTTTTATTAATTCAGCGGAATGTGAAAAACCgc
ataattttaatttcttactTTTTGAACCAGAATGGCAATACGAACCGAAA
CGTTGTATTTATAATCCGACTTGGGATACAAGTAAACAAAACACTGTTGG
TGGTGTGTATGATGGCAGAGAGGATAATAAAAGGCTGGCTGACCAAGATG
TCGAATATTTTGTAGGCAATGAttaa Coding sequence (CDS) from alignment at sc0000049_pilon:112555..114580+ >XLOC_033028 ID=XLOC_033028|Name=XLOC_033028|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2568bp|location=Sequence derived from alignment at sc0000049_pilon:112555..114580+ (Clytia hemisphaerica_ch_hm2_pilon)
atGAGAATACGAATGAAAATACAAACCATCATTtattttggaatgttttt
cggTTTATGTATTGTCTTTTATTACGCCCTCATTCACGCCACCAACCAGT
ACAAAGATCAACCCATAAACCAAATCCACCAATCCAAGAACGATTTTCCA
AAACACACCGATCCACCTTCAGAGCTAGACATCATAATGGATAGAGCAAT
GCAATGGGCATCACAAACCAGAGCACAGAAGTTGGCAACTATGCTACAGA
ACCCTGTTTACGAACGTCTTCAATTGAAAGATACAGTGCGCAAAAATGAT
GGAAGTGTGGTGAAAATCAAACGGAAGAAAGTTGATTTGCTATTGATTGT
TTCATCAGGACCAAGAAGGTTTGACCGGAGACAAGCAATTCGCCAAAGCT
GGTGGAAAGATTGCGTTCCTACCTCCAAGatGAGAATACGAATGAAAATA
CAAACCATCATTtattttggaatgtttttcggTTTATGTATTGTCTTTTA
TTACGCCCTCATTCACGCCACCAACCAGTACAAAGATCAACCCATAAACC
AAATCCACCAATCCAAGAACGATTTTCCAAAACACACCGATCCACCTTCA
GAGCTAGACATCATAATGGATAGAGCAATGCAATGGGCATCACAAACCAG
AGCACAGAAGTTGGCAACTATGCTACAGAACCCTGTTTACGAACGTCTTC
AATTGAAAGATACAGTGCGCAAAAATGATGGAAGTGTGGTGAAAATCAAA
CGGAAGAAAGTTGATTTGCTATTGATTGTTTCATCAGGACCAAGAAGGTT
TGACCGGAGACAAGCAATTCGCCAAAGCTGGTGGAAAGATTGCGTTCCTA
CCTCCAAGGTTATCCCGAAATGTTGGTTTCTGACAGACTACCAGTATCCA
TCAGATAAGTATTATCAAAACAtaacgaaagaaaaaaacacctaCAAAGA
TGTTTATTTACAACCGCTGCGTGGTGGAATCGAGTTTGGGAAGCGTTTCA
TGTATCACATGTTATGGGCACTCATTCATTacgatttcaaatattttgtg
cGAATAGATGACGATTATTTCCTTTGTTTACATCGTTTGTTAAAGGAACT
TCCCATTGCTCCGCCATTAAAGAATTTCCACTGGGGATACACCCATTGTA
TCCAAGAAATGATTAGACCTGAGGAGAGTCTTATTATGTTATCTAGAGAT
TTAGTTGAACGATTTTTACTTCAAGCTCCTCATGAGATCAGATGTCATCC
GTGGGCTGATCAAATGATTGGAGTCTGGGTGACAGATATGAATATATTAA
CTTTATTTCGTACTGACGATCGAGTACACCATGCCCCTATTGTAGACAAA
TCACCTTATTTGAGACTGGAGaaaaaagtatgtaacaagtATATAGCTAT
ACACGGAACTTATCCCAAAGACATGAAACTATTTTGGAGTCGACGTGGAA
ACCCGATTCAAGAATTCTCCTCCGAGAAAGATCGCGATAAAACTATTGGT
AACGTTTTTATTAATTCAGCGGAATGTGAAAAACCgcataattttaattt
cttactTTTTGAACCAGAATGGCAATACGAACCGAAACGTTGTATTTATA
ATCCGACTTGGGATACAAGTAAACAAAACACTGTTGGTGGTGTGTATGAT
GGCAGAGAGGATAATAAAAGGCTGGCTGACCAAGATGTCGAATATTTTGT
AGGCAATGAttaaGTTATCCCGAAATGTTGGTTTCTGACAGACTACCAGT
ATCCATCAGATAAGTATTATCAAAACAtaacgaaagaaaaaaacacctaC
AAAGATGTTTATTTACAACCGCTGCGTGGTGGAATCGAGTTTGGGAAGCG
TTTCATGTATCACATGTTATGGGCACTCATTCATTacgatttcaaatatt
ttgtgcGAATAGATGACGATTATTTCCTTTGTTTACATCGTTTGTTAAAG
GAACTTCCCATTGCTCCGCCATTAAAGAATTTCCACTGGGGATACACCCA
TTGTATCCAAGAAATGATTAGACCTGAGGAGAGTCTTATTATGTTATCTA
GAGATTTAGTTGAACGATTTTTACTTCAAGCTCCTCATGAGATCAGATGT
CATCCGTGGGCTGATCAAATGATTGGAGTCTGGGTGACAGATATGAATAT
ATTAACTTTATTTCGTACTGACGATCGAGTACACCATGCCCCTATTGTAG
ACAAATCACCTTATTTGAGACTGGAGaaaaaagtatgtaacaagtATATA
GCTATACACGGAACTTATCCCAAAGACATGAAACTATTTTGGAGTCGACG
TGGAAACCCGATTCAAGAATTCTCCTCCGAGAAAGATCGCGATAAAACTA
TTGGTAACGTTTTTATTAATTCAGCGGAATGTGAAAAACCgcataatttt
aatttcttactTTTTGAACCAGAATGGCAATACGAACCGAAACGTTGTAT
TTATAATCCGACTTGGGATACAAGTAAACAAAACACTGTTGGTGGTGTGT
ATGATGGCAGAGAGGATAATAAAAGGCTGGCTGACCAAGATGTCGAATAT
TTTGTAGGCAATGAttaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:112555..114580 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 430-1284:1172 |
| Aaloc | 1-429:1 |
|
