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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000049_pilon:109974..111944+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033027 ID=XLOC_033027|Name=XLOC_033027|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1971bp|location=Sequence derived from alignment at sc0000049_pilon:109974..111944+ (Clytia hemisphaerica_ch_hm2_pilon)
ataataaaaataatggaTAGTTTTGACAGTGGCaatgaaagtgaagaaaa
tgatgaaattgcACGGTCAGCACATGCTGGTATGCTCCATGATCATGAAC
GTCATCTGAAATTCAACCAAGCATTAAAAGAAACATTGGCGGAACTTTCA
AAAACGAAGAACAGTATCCAAGTCCTTGACATTGGGACAGGTACCAGTAT
TTTATCCATGATGGCTGCTAGTCATTctgaaaaagtgaaagtagttGCGT
GTGAAATGTTTCAACCAATTGCTGAACTAGCTCGAGAAATTATCACAGAT
AATGGATTTGAGCAACAAATCAAAGTTTTGAATAAATCTTCTACTGAGAT
GACAATTCCTGAAGATTTACCAAGAAAAGCTGATGTGTTGGTAACTGAGA
TTCTCGATTCTGAACTTATTGGTGAAGGTATGTTACCAACTGTCAATGAT
GCTCATCTACGTCTGCTATCTAAAGATGCTATGATTATTCCAGCTGCAGC
TCAGGTTTGTATTCAACTTGTTGAAAGTGAAAGTTTATGGGAAATGAATA
ATCTTGATGAAAAGAATTCAGGATTGAAACTACCAAAGCATTACCAAGAC
TGTCGCCGCACAGCCAATGCCCATGAAATTCAATGTAGCCAATTATACCC
AGACCACATCAAGGTGTTATCAAATTCATGTATATGTACTGAAATTGATT
TTACGTCTGTTTACAAACATAACGACACGGCAAAGCAATCAAAACATCAA
ATATTAGTTAAGGTGACAAAAACGGGGATATTGCATGGTATTGTTATGTG
GTGGGACCTCATCGTGCATAAAGAGAAAGATATTATTTTGTCGATGGCAC
CTTCTTGGGTTTCTGAAGAATATATCTGGCGTGATCACTGGATGCAATGT
TTATACTTTTTACCAAAGCCTATTGAAGTTATCTCTGGTGAATCATTACA
AGTGACAATGTACCATGATAACTATACTGTATGGTTTGACGTCGTTAGAA
ATGTTCTTTCTTCCTCCAACAGCTTACAGCCACCAATTTGTCATTGTAAT
CTTCATGTAGCTTGGTCACGTGAGACGTTTGCTCTGTGGAATACTAAAAA
ACTCATTGAGAAATGGAGACAATTGGGTTACAAGCTATCTAAAGATGATA
AACGAGTTGTTATCGTTGGTGATTCTTCATTAGCTGCTTTagttttgaaa
aacaatggTTTTGAGAATGTCGCTTATTCTGAGTCTTCAAAATGGACAAG
AAGCATCATCAAAGGAATTTGTGACGCCAACAATGTCATTTTTCCATTAA
CCAAAGTAAACCATGAAACTGATACAGTTGTTTATGACCCTTTCTGGCCT
TGTAATATTCTACCATGGCATATTCTACAAATCTGGCATGATGTCTTTTC
CTTATCACAAAAAGGGGTACAAGTTTATCCTTCTATGTTATATTTAAAAG
CTGCAGTAGTGAAATTTCAAGAATTGTATAAAATAAGATCAACTGTTGGT
GATATTCTTGGTTTtgatttgaccaaatttgatgaTTTGATATCCAAAGT
ACAATGTGTCTATTCAGATCCGGAGCATGGACAATTTTACAGTGCAGAAC
CTTATTCTATGATTGAGTACCAACACTCAATTGCAAGCGATATAGTCACT
CTAATGGATTTTAACTTGACAGACCAGCCACCCAGTAAGGATATACTTCG
GTCAGTTACGATAAAGTTAGATACTGAATTCTCCAAGGAAATGGCTTTAG
TTGTCTGGCTCGATTCTGTTTATAGTGAGGACATTACTTTCACGACAGGG
CTGACATCAAAACATTCACCCTGGGTGCAATACAGTAAACAAGCTGTGGT
TTTCATTCCTGGCTTTTTGAAAAAGGAGTTGAGTGGCTCAACAACTATAG
ATTGCACTGTTTTGTATCGTCCTGGACATGACCATGATGtggtgttttct
ttttcaaggatGGGCTTTTAA Coding sequence (CDS) from alignment at sc0000049_pilon:109974..111944+ >XLOC_033027 ID=XLOC_033027|Name=XLOC_033027|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3942bp|location=Sequence derived from alignment at sc0000049_pilon:109974..111944+ (Clytia hemisphaerica_ch_hm2_pilon)
ataataaaaataatggaTAGTTTTGACAGTGGCaatgaaagtgaagaaaa
tgatgaaattgcACGGTCAGCACATGCTGGTATGCTCCATGATCATGAAC
GTCATCTGAAATTCAACCAAGCATTAAAAGAAACATTGGCGGAACTTTCA
AAAACGAAGAACAGTATCCAAGTCCTTGACATTGGGACAGGTACCAGTAT
TTTATCCATGATGGCTGCTAGTCATTctgaaaaagtgaaagtagttGCGT
GTGAAATGTTTCAACCAATTGCTGAACTAGCTCGAGAAATTATCACAGAT
AATGGATTTGAGCAACAAATCAAAGTTTTGAATAAATCTTCTACTGAGAT
GACAATTCCTGAAGATTTACCAAGAAAAGCTGATGTGTTGGTAACTGAGA
TTCTCGATTCTGAACTTATTGGTGAAGGTATGTTACCAACTGTCAATGAT
GCTCATCTACGTCTGCTATCTAAAGATGCTATGATTATTCCAGCTGCAGC
TCAGGTTTGTATTCAACTTGTTGAAAGTGAAAGTTTATGGGAAATGAATA
ATCTTGATGAAAAGAATTCAGGATTGAAACTACCAAAGCATTACCAAGAC
TGTCGCCGCACAGCCAATGCCCATGAAATTCAATGTAGCCAATTATACCC
AGACCACATCAAGGTGTTATCAAATTCATGTATATGTACTGAAATTGATT
TTACGTCTGTTTACAAACATAACGACACGGCAAAGCAATCAAAACATCAA
ATATTAGTTAAGGTGACAAAAACGGGGATATTGCATGGTATTGTTATGTG
GTGGGACCTCATCGTGCATAAAGAGAAAGATATTATTTTGTCGATGGCAC
CTTCTTGGGTTTCTGAAGAATATATCTGGCGTGATCACTGGATGCAATGT
TTATACTTTTTACCAAAGCCTATTGAAGTTATCTCTGGTGAATCATTACA
AGTGACAATGTACCATGATAACTATACTGTATGGTTTGACGTCGTTAGAA
ATGTTCTTTCTTCCTCCAACAGCTTACAGCCACCAATTTGTCATTGTAAT
CTTCATGTAGCTTGGTCACGTGAGACGTTTGCTCTGTGGAATACTAAAAA
ACTCATTGAGAAATGGAGACAATTGGGTTACAAGCTATCTAAAGATGATA
AACGAGTTGTTATCGTTGGTGATTCTTCATTAGCTGCTTTagttttgaaa
aacaatggTTTTGAGAATGTCGCTTATTCTGAGTCTTCAAAATGGACAAG
AAGCATCATCAAAGGAATTTGTGACGCCAACAATGTCATTTTTCCATTAA
CCAAAGTAAACCATGAAACTGATACAGTTGTTTATGACCCTTTCTGGCCT
TGTAATATTCTACCATGGCATATTCTACAAATCTGGCATGATGTCTTTTC
CTTATCACAAAAAGGGGTACAAGTTTATCCTTCTATGTTATATTTAAAAG
CTGCAGTAGTGAAATTTCAAGAATTGTATAAAATAAGATCAACTGTTGGT
GATATTCTTGGTTTtgatttgaccaaatttgatgaTTTGATATCCAAAGT
ACAATGTGTCTATTCAGATCCGGAGCATGGACAATTTTACAGTGCAGAAC
CTTATTCTATGATTGAGTACCAACACTCAATTGCAAGCGATATAGTCACT
CTAATGGATTTTAACTTGACAGACCAGCCACCCAGTAAGGATATACTTCG
GTCAGTTACGATAAAGTTAGATACTGAATTCTCCAAGGAAATGGCTTTAG
TTGTCTGGCTCGATTCTGTTTATAGTGAGGACATTACTTTCACGACAGGG
CTGACATCAAAACATTCACCCTGGGTGCAATACAGTAAACAAGCTGTGGT
TTTCATTCCTGGCTTTTTGAAAAAGGAGTTGAGTGGCTCAACAACTATAG
ATTGCACTGTTTTGTATCGTCCTGGACATGACCATGATGtggtgttttct
ttttcaaggatGGGCTTTTAAataataaaaataatggaTAGTTTTGACAG
TGGCaatgaaagtgaagaaaatgatgaaattgcACGGTCAGCACATGCTG
GTATGCTCCATGATCATGAACGTCATCTGAAATTCAACCAAGCATTAAAA
GAAACATTGGCGGAACTTTCAAAAACGAAGAACAGTATCCAAGTCCTTGA
CATTGGGACAGGTACCAGTATTTTATCCATGATGGCTGCTAGTCATTctg
aaaaagtgaaagtagttGCGTGTGAAATGTTTCAACCAATTGCTGAACTA
GCTCGAGAAATTATCACAGATAATGGATTTGAGCAACAAATCAAAGTTTT
GAATAAATCTTCTACTGAGATGACAATTCCTGAAGATTTACCAAGAAAAG
CTGATGTGTTGGTAACTGAGATTCTCGATTCTGAACTTATTGGTGAAGGT
ATGTTACCAACTGTCAATGATGCTCATCTACGTCTGCTATCTAAAGATGC
TATGATTATTCCAGCTGCAGCTCAGGTTTGTATTCAACTTGTTGAAAGTG
AAAGTTTATGGGAAATGAATAATCTTGATGAAAAGAATTCAGGATTGAAA
CTACCAAAGCATTACCAAGACTGTCGCCGCACAGCCAATGCCCATGAAAT
TCAATGTAGCCAATTATACCCAGACCACATCAAGGTGTTATCAAATTCAT
GTATATGTACTGAAATTGATTTTACGTCTGTTTACAAACATAACGACACG
GCAAAGCAATCAAAACATCAAATATTAGTTAAGGTGACAAAAACGGGGAT
ATTGCATGGTATTGTTATGTGGTGGGACCTCATCGTGCATAAAGAGAAAG
ATATTATTTTGTCGATGGCACCTTCTTGGGTTTCTGAAGAATATATCTGG
CGTGATCACTGGATGCAATGTTTATACTTTTTACCAAAGCCTATTGAAGT
TATCTCTGGTGAATCATTACAAGTGACAATGTACCATGATAACTATACTG
TATGGTTTGACGTCGTTAGAAATGTTCTTTCTTCCTCCAACAGCTTACAG
CCACCAATTTGTCATTGTAATCTTCATGTAGCTTGGTCACGTGAGACGTT
TGCTCTGTGGAATACTAAAAAACTCATTGAGAAATGGAGACAATTGGGTT
ACAAGCTATCTAAAGATGATAAACGAGTTGTTATCGTTGGTGATTCTTCA
TTAGCTGCTTTagttttgaaaaacaatggTTTTGAGAATGTCGCTTATTC
TGAGTCTTCAAAATGGACAAGAAGCATCATCAAAGGAATTTGTGACGCCA
ACAATGTCATTTTTCCATTAACCAAAGTAAACCATGAAACTGATACAGTT
GTTTATGACCCTTTCTGGCCTTGTAATATTCTACCATGGCATATTCTACA
AATCTGGCATGATGTCTTTTCCTTATCACAAAAAGGGGTACAAGTTTATC
CTTCTATGTTATATTTAAAAGCTGCAGTAGTGAAATTTCAAGAATTGTAT
AAAATAAGATCAACTGTTGGTGATATTCTTGGTTTtgatttgaccaaatt
tgatgaTTTGATATCCAAAGTACAATGTGTCTATTCAGATCCGGAGCATG
GACAATTTTACAGTGCAGAACCTTATTCTATGATTGAGTACCAACACTCA
ATTGCAAGCGATATAGTCACTCTAATGGATTTTAACTTGACAGACCAGCC
ACCCAGTAAGGATATACTTCGGTCAGTTACGATAAAGTTAGATACTGAAT
TCTCCAAGGAAATGGCTTTAGTTGTCTGGCTCGATTCTGTTTATAGTGAG
GACATTACTTTCACGACAGGGCTGACATCAAAACATTCACCCTGGGTGCA
ATACAGTAAACAAGCTGTGGTTTTCATTCCTGGCTTTTTGAAAAAGGAGT
TGAGTGGCTCAACAACTATAGATTGCACTGTTTTGTATCGTCCTGGACAT
GACCATGATGtggtgttttctttttcaaggatGGGCTTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000049_pilon | genome | sc0000049_pilon:109974..111944 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1971:1 |
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