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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000282_pilon:289499..293412- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033011 ID=XLOC_033011|Name=XLOC_033011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3914bp|location=Sequence derived from alignment at sc0000282_pilon:289499..293412- (Clytia hemisphaerica_ch_hm2_pilon)
AGGCTTGATCGTCTGCTTGTTATTCTTGATACAGGCTCCACACCTGTCAC
CAGGAAAGCTGCTGCAAAACAACTTGGGGAAATTCAGAAGCTACATCCAC
ATGAACTCCCGAACCTCCTGGGGAGAGTAAGAACCTTTCATTGTTATAGA
TTTTGCAAACCAGATTGGTTGGTACCACACTTAATCATCATTGTTGGATT
GTTGGAATGCCTTAATTGATAATGCGCTATTTTCAGATCCATTTTCTTAA
TTTTGTCTGTGAAAACCTTGATATTTTTATAACAAACAACAAACCTTTTA
AAGACATTTCAATAATTTGTATTTTGAAAATTCACATCCCAAGCATTAAA
ACTGCTATATCAATTTAATTCTTGTTATAATCAGGTCTTTGTGTACTTAA
GAAGCAAGAATTGGGATACGAGAGTTGCAGCTGCCCATGCAATACAAGCT
ATTGCAGAAAACGTCCCTGAGTGGAATCCTGACGGCTTGAAAATCAAACC
TGAAGGTGACTTTTTAAATTTATTTTTACAGTTATTTGATTGAAATAAAC
TTGTTTCTACATTGGATAATACTAGGTCTGTTCGCTTACACTTTCTTTTC
TTTCATAAGAACAACGAGGCTCAAAATCGCCAAAAATAAGAACAATTTAT
AAATAATAATGCTATAAAGCCTAAAATAACTCCATTCCAAGCAATTTAGG
GGTCAAAGTAGTAAAAATTGGGGTCAACGTCTAAAAAAACCTCAATTACA
CCCTATAAAATAAGAACAGGGTATAAAGATCCCTCAAAAGTTTATCTTTC
CTCTTTCCAATGCAAAGGATTGATTCTTTCACAGTTCATAGAACTCGAGG
AAATTCACTTCAAAGAAGGGGGACTTTTTTCTGGGACACCCGATAGCAAA
GGCACATACGTCAGTCAAAAATCCTTTGCCTGTTTGACTTTTGCATTGAT
TTAGCACGTCAACAAAATACAGAACGGATGGCATGTATAATTAGCTTAGT
TCTGTATTTTGTTGACGTTCTTGATTACAACCAAGCATAACCATCCAATT
CCATTTCTATTCGCTACAACTTACAATATAAACGAAGTTGTTTCAAAATC
GCACACCATACGATACCTTACAGTGCATTAGATTACAAACAGCATTTGAT
ACTAAATGACAATCGAAATGTTTCTCTTTTAGAATACTGTGCACTAGAAA
ACGTCAACCTTGATGGCAAACTACGTTTCGAAGATTTTGACATCAACACA
GTTCTGGAGCGCGGAGAAAAACTTCTTGGATCGGCGGGCGAAGAATATGA
TTTCGAAGATACTATACTTTCAGGTAAGGTAGGCAGCATTGAAGGTTAAA
TCAAAAGATGAATGTGATAACTTCCATCGGCAAGTGCTCTTTGATTCCTT
CTTGTCAATTAATCCAAATTGATCCGTTGTCTTTTGTAAGCCTTTCAACG
CTAATAAAATCACTAATTTTTTTTTGAGGGGGTTTCTACGTTTCTACGTT
TTATGAAATGTTTTAGTGTTTCTAAAGTGGGCAATACTCATGTAGTTCTT
GAATCTGAAATACCCAAAATTACCTAATTTGCTTCTAAATTTTTTAAGCT
CTATCTCTGGTATACAGTCTGTCTAAGGTGACCCGAACGCTTGTCCTCTT
CTTGTTGAACCTGCCAGGTAAATTTAAGCTGGCACTGTTTGTTATCAAAA
GAGTTTTAGAATATGCTATAGGTTGGAAAAAAGTGGCTGGGAGGTCTGGG
GGCACTGGTTGACCAGGTGGTCCAGGGCAGAGTCATGTTTGAAGTTAAGG
TAGCAAAGCCCTTAGAAAATATGACTTTGTTGTAGAATTAAGTGCTAAAA
TATTGAATTCTTCAAGACTTTCTTTACCTTTTGCCTTTTTTCGCAGCTAT
TTTTTTTGCTTGAAGATTAAGTTGACAACTCGATTGAGTTTCTGCTACCA
TTATCCGGTAGCAGAAAATTCCTGGAAATATGCCTGCCCACCACCTTTGT
GCACCGTAGCAGGATGCTCTACTTTCATAATACTACAGCAGCTTTATACA
CTCTGGGAATCAATCACACTCTGAGTTTACATGTGATATTCAAACTACGA
ATATTTAGGTATGTCTCGATCGGAGACCATTGCACACCAACGTCAACAAT
TGAAGAAGAAACTGGGTTTTGGTGGAAACATGGATTTGGGATTCGATTCG
ATGTTGGATGATGAAGATCTGGTCACCACGAATAACGTTGGTGATGGTGG
TGGAAGTAAAAAAGTCATGTCGCAGTTATCGACTGAGGTATGAGATAGTC
TCATCTCTATCTTGAAAGTACTTTGAATTATCAGATCTATTCACTTAAAT
TACTCTAGATTTACTATCCAGCGAATAAGCATACCTCTTAGGACAAATCA
CGTCATTCTCGCGAGAATTCATAAATTTTTGCATCTTTTACTAGTTGAAT
TTCTGTCAGTATTTGAAACTACGGTTTGTCTAAAGCCTTTGGTTAACTTA
AGAAAAAATGTGGAAAAAAAAGTTAAACCCTTCAAGCCTGTACTCCTCGT
TTGGCTCTGCCATTTTTAAAACGATTTTCTCATCTAAAATCAATAGTTTG
CGACTCCTGTTGTACCGGTTAAGAGACAGAGGTGTACGCTTCAGAAAGAT
TCCCATTCAAGACTCTTTTGTTTCAATTTGTTCGCTTGTTATTTCTTTCA
TTAAAAAATTACACGGATTCAAAGTTGAAATACAGTTGATTCTCTCTAAT
TCAATCTTCAAGGGACCAAAAATTTCCTTCGAATTAGAGAAAGATTCGGA
TTATGGAGAGTATCTTATACGATGTTCCAGATGAGGCGACCAATGTTTTA
GTTTGAATTACAGAAAAATTTAACAATAGGATTTTGATTTAGAGAAGGTT
GACTGTAGAAATGATTTTGAAAGACTTTTTTACTTTAGAGTGCAGCGGAC
ATTGTGGCATCGCAAATAGCAGCGATTTCATCAGATGGCCAGATGAGTTC
CAGAGAGAAGAACCGTGCCAAAAGAAAAGCCAAGTCCTTGGCCAAACAAA
GATCAAAAGAAAATGAAAACAGAAGGTAGGTGATTCCTATGCCAAGGCTA
CCGTGGATTTTACATATTTTGATTATTAAAGGGGTTGGTACGAACTTAAA
TCCATACACTGATATGTTTTTCCTGATGAGTTTGTTAGTTTCTCTATGAC
CAAAGATGTGACTGGTAGTGGTTAATAAATCTTTCTACCAATAAATTTTC
CAGCTCTTTAAATTTCTAAAAAATTCCCAGCTCAGCCAAATTACTAATGA
GTTTCCAGCTCAGCCAAATTACTAATAATTACTAATAAATTCCACCGTTT
TAGGTTCTAAAGGATGTCTGAATGCCCCTGAATTAGATAGTTTCTTTATA
TTTAACCTACAGTGCTACCTTAAACTATGATTCTGAAAAAAACTTCTGAA
ATTTTTCGTTTACCAAATTTTAGATCTTTTCTCTCATTCCATATCAAATT
CAACATAACGGCAGTGTATCGAGACTGGTGTATAAAGACTCTTTTTAGAA
ATTTCAAATTGAAGTAATATATAAACAGGGTTGAAAAAAATTGTAGGTGT
TGCTTACTTACGACCAGTGAAGGTATTGTGTATATCAACAGGTACATGAG
ATTATATCACTTTTAAGTAATCTGGTTATCTATATTAGTTTTGACACTGG
TGAATGTCCGGCAGAGTAGAAATTTAATCCCCGCGAAAATTTATCCCATT
TAAGTATCGCTTTTAATCTGATAATCTCTTTTAGTTTTGACACTGGTGAA
GGTCCGGCAGAGAAGAAGCAGCGACGGACACAAAGTGTGTTAGTGGAACA
ACCAAGCGAAGATGGGAAGATCATGATCGATAATGTGTCGGACGGTACCA
TGAGTATGGACGAG Coding sequence (CDS) from alignment at sc0000282_pilon:289499..293412- >XLOC_033011 ID=XLOC_033011|Name=XLOC_033011|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1668bp|location=Sequence derived from alignment at sc0000282_pilon:289499..293412- (Clytia hemisphaerica_ch_hm2_pilon)
AGGCTTGATCGTCTGCTTGTTATTCTTGATACAGGCTCCACACCTGTCAC
CAGGAAAGCTGCTGCAAAACAACTTGGGGAAATTCAGAAGCTACATCCAC
ATGAACTCCCGAACCTCCTGGGGAGAAGGCTTGATCGTCTGCTTGTTATT
CTTGATACAGGCTCCACACCTGTCACCAGGAAAGCTGCTGCAAAACAACT
TGGGGAAATTCAGAAGCTACATCCACATGAACTCCCGAACCTCCTGGGGA
GAGTCTTTGTGTACTTAAGAAGCAAGAATTGGGATACGAGAGTTGCAGCT
GCCCATGCAATACAAGCTATTGCAGAAAACGTCCCTGAGTGGAATCCTGA
CGGCTTGAAAATCAAACCTGAAGGTCTTTGTGTACTTAAGAAGCAAGAAT
TGGGATACGAGAGTTGCAGCTGCCCATGCAATACAAGCTATTGCAGAAAA
CGTCCCTGAGTGGAATCCTGACGGCTTGAAAATCAAACCTGAAGAATACT
GTGCACTAGAAAACGTCAACCTTGATGGCAAACTACGTTTCGAAGATTTT
GACATCAACACAGTTCTGGAGCGCGGAGAAAAACTTCTTGGATCGGCGGG
CGAAGAATATGATTTCGAAGATACTATACTTTCAGAATACTGTGCACTAG
AAAACGTCAACCTTGATGGCAAACTACGTTTCGAAGATTTTGACATCAAC
ACAGTTCTGGAGCGCGGAGAAAAACTTCTTGGATCGGCGGGCGAAGAATA
TGATTTCGAAGATACTATACTTTCAGGTATGTCTCGATCGGAGACCATTG
CACACCAACGTCAACAATTGAAGAAGAAACTGGGTTTTGGTGGAAACATG
GATTTGGGATTCGATTCGATGTTGGATGATGAAGATCTGGTCACCACGAA
TAACGTTGGTGATGGTGGTGGAAGTAAAAAAGTCATGTCGCAGTTATCGA
CTGAGGTATGTCTCGATCGGAGACCATTGCACACCAACGTCAACAATTGA
AGAAGAAACTGGGTTTTGGTGGAAACATGGATTTGGGATTCGATTCGATG
TTGGATGATGAAGATCTGGTCACCACGAATAACGTTGGTGATGGTGGTGG
AAGTAAAAAAGTCATGTCGCAGTTATCGACTGAGAGTGCAGCGGACATTG
TGGCATCGCAAATAGCAGCGATTTCATCAGATGGCCAGATGAGTTCCAGA
GAGAAGAACCGTGCCAAAAGAAAAGCCAAGTCCTTGGCCAAACAAAGATC
AAAAGAAAATGAAAACAGAAGAGTGCAGCGGACATTGTGGCATCGCAAAT
AGCAGCGATTTCATCAGATGGCCAGATGAGTTCCAGAGAGAAGAACCGTG
CCAAAAGAAAAGCCAAGTCCTTGGCCAAACAAAGATCAAAAGAAAATGAA
AACAGAAGTTTTGACACTGGTGAAGGTCCGGCAGAGAAGAAGCAGCGACG
GACACAAAGTGTGTTAGTGGAACAACCAAGCGAAGATGGGAAGATCATGA
TCGATAATGTGTCGGACGGTACCATGAGTATGGACGAGTTTTGACACTGG
TGAAGGTCCGGCAGAGAAGAAGCAGCGACGGACACAAAGTGTGTTAGTGG
AACAACCAAGCGAAGATGGGAAGATCATGATCGATAATGTGTCGGACGGT
ACCATGAGTATGGACGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000282_pilon | genome | sc0000282_pilon:289499..293412 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 715-843:130 |
| Aaloc | 577-711:977 |
| Aaloc | 400-576:1805 |
| Aaloc | 259-396:2731 |
| Aaloc | 136-255:3531 |
| Aaloc | 10-135:3915 |
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