|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000282_pilon:267203..269299+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033005 ID=XLOC_033005|Name=XLOC_033005|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2097bp|location=Sequence derived from alignment at sc0000282_pilon:267203..269299+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTCTAATAACGTTAATTTTTGACAAACATTGTTTTGGTACAATCTC
AATGGTATTTGGGCGAAGAAAAACAACAAAACACAACAAATCTTGATACA
AAGGATGCTTCAAAACCTGTTCTTGTAACATCACCAGTCGAGTGTATTTT
GAAATGCAAGAGAAAAGGAATGGACAATTTCTATGTTAAGGATAAAAATG
AATGTTTCTGTTTGAAGAGTCAAGACCAGGCGATTAATTCAGATGGAGAA
TCAATGCAAGGAATCGTTTATAAACAAGTAAGTACATGCTTCTTTTTGTA
TTAGAATAGTGTACTTTGGATGAGGGTCAATCCCGGGGGGGGGGACAGTC
AGGCAAATTGACCGACGGGTATGTGCGGCGGTTAAGGGTATGTTTTTCAA
AATATCATAAATGCACTGTAAGGGTGGACTTTTGATAAATGCACTGTAAG
GGTGGAAATTTCAGCAAATCTGGGAAAAATTTCAAATTTTTGCTCGaaaa
tgttgattttttttgctctaaaagagtttaaaatttgaaaaaatgcactg
taagggtatgaatttcaccgatttttttctgcactgtaaggctgcgattc
taaaagccaattttttcgccgcacataccgtcagttggtaaacccactgc
ccccccccccggggtcaaTTATTCTTAATGTATCTTTAATTTCTTAGACT
GTTTTAtacaaacaagaaaaatgatcATTTTAAAGAGTTTGAGACTTTTG
AGTGCACATTGGGAGCTAAAATTAAAATTCtgcttcaaactttttttctg
ttaaccaaatagaAAGTGACTTTATTCTCATCACAATCTGTGAAACttag
agggtattcttacgatttggccaattttcaccctgatataaggtattctt
acaaaaaatcattatgcaaaatatcagaaaaaaaataatgagccaacCTC
GAGAAAAAATGGTAACAGatgaacggacgaacaaacaaaAGGTTAAAATA
AAGAACATCCGTGGTAGGTCTAAAAACAGCGGGTAAGCCAAGGTAGAAAT
TATAATTAGTTAATGTAGATGGGTCCTTAATTTCAAAACAAAGGCTGAAT
GAAGTCTAAACCAGATTTTATCAACCTAAAGTCATCTTTTAAAAGAATAC
TCTGAAACAAAAGTGGTGTTTAAAAAAAAAGTCTTTCGGAGAAGAGACAA
CTTCTTTTTCCTCGAAAAcgtatatttgaaaaatatttgattttttttca
gtattGTAACGAAGAAACATACGGTGATTCAAACCCATTGGTCATTAAAG
GTCAGTATTTTAAACCGTTTTCCGAAGATATATAAATTCACATGTATGGT
CGATTACAAAATTAGCACAAGATGATCCAAGCATCTTATTTAGGCCCGGC
GAACGGCAAATAATTTAACCCGGGAACTCCTCAAAACtcgccggaacagg
cgaaaaccAGCTTTGCCCTGCCCAAAATGCACGAAGAGTTAAAAATGCTT
GATATTTAGCCAATCGGATTTTGCTTGCTTTTTTAAGATAAGAAGAAACT
AAAGATTCGCAAAGCTACCTCCACAACACCAATTCTTCAGTGGCCTGAAT
TGCACATTTATCGGTTGGACGTCAAAGCTGGGGAGTATCGGCTAGGCGAT
ATATTCATATTGCCGAAAGTGGATAACACAATAACTGGCAATTATGTCCT
TAGCCCAGTCAACCCCAGCGATACCGATATATTCAAAGTACCAATCTCTT
ACGAAAGGTTCTGGATGAAGTTTAATCAAGCATTTTGGAGGCCAACTTGC
CCCGCTGGGTATGCTCGATTTGGAATCTTAGCTACGGTACAGGATAAAAA
GCCTGTTGACGGTGACATCTATTGTGTCAATGAGGAGTATGCTTTGAAAG
GTTCAATGGTATGGGAACTTATTTGGAAATGGGACCGTGATGCTTACAAC
AGAGCAGTGATTTTTAAAGGAAAGTCTGGACAGCCCGACAAAACAGTGGA
TTTGATCACAGTTTTGGTAGCCCCGAAGAATACCTATCAAAGTCCATCGC
AAAATTACCACTTTTTGTCGAAAGAATTTATTGTTGaggaaaattaa Coding sequence (CDS) from alignment at sc0000282_pilon:267203..269299+ >XLOC_033005 ID=XLOC_033005|Name=XLOC_033005|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1772bp|location=Sequence derived from alignment at sc0000282_pilon:267203..269299+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTCTAATAACGTTAATTTTTGACAAACATTGTTTTGGTACAATCTC
AATGGTATTTGGGCGAAGAAAAACAACAAAACACAACAAATCTTGATACA
AAGGATGCTTCAAAACCTGTTCTTGTAACATCACCAGTCGAGTGTATTTT
GAAATGCAAGAGAAAAGGAATGGACAATTTCTATGTTAAGGATAAAAATG
AATGTTTCTGTTTGAAGAGTCAAGACCAGGCGATTAATTCAGATGGAGAA
TCAATGCAAGGAATCGTTTATAAACAAATGCTTCTAATAACGTTAATTTT
TGACAAACATTGTTTTGGTACAATCTCAATGGTATTTGGGCGAAGAAAAA
CAACAAAACACAACAAATCTTGATACAAAGGATGCTTCAAAACCTGTTCT
TGTAACATCACCAGTCGAGTGTATTTTGAAATGCAAGAGAAAAGGAATGG
ACAATTTCTATGTTAAGGATAAAAATGAATGTTTCTGTTTGAAGAGTCAA
GACCAGGCGATTAATTCAGATGGAGAATCAATGCAAGGAATCGTTTATAA
ACAAtattGTAACGAAGAAACATACGGTGATTCAAACCCATTGGTCATTA
AAGtattGTAACGAAGAAACATACGGTGATTCAAACCCATTGGTCATTAA
AGATAAGAAGAAACTAAAGATTCGCAAAGCTACCTCCACAACACCAATTC
TTCAGTGGCCTGAATTGCACATTTATCGGTTGGACGTCAAAGCTGGGGAG
TATCGGCTAGGCGATATATTCATATTGCCGAAAGTGGATAACACAATAAC
TGGCAATTATGTCCTTAGCCCAGTCAACCCCAGCGATACCGATATATTCA
AAGTACCAATCTCTTACGAAAGGTTCTGGATGAAGTTTAATCAAGCATTT
TGGAGGCCAACTTGCCCCGCTGGGTATGCTCGATTTGGAATCTTAGCTAC
GGTACAGGATAAAAAGCCTGTTGACGGTGACATCTATTGTGTCAATGAGG
AGTATGCTTTGAAAGGTTCAATGGTATGGGAACTTATTTGGAAATGGGAC
CGTGATGCTTACAACAGAGCAGTGATTTTTAAAGGAAAGTCTGGACAGCC
CGACAAAACAGTGGATTTGATCACAGTTTTGGTAGCCCCGAAGAATACCT
ATCAAAGTCCATCGCAAAATTACCACTTTTTGTCGAAAGAATTTATTGTT
GaggaaaattaaATAAGAAGAAACTAAAGATTCGCAAAGCTACCTCCACA
ACACCAATTCTTCAGTGGCCTGAATTGCACATTTATCGGTTGGACGTCAA
AGCTGGGGAGTATCGGCTAGGCGATATATTCATATTGCCGAAAGTGGATA
ACACAATAACTGGCAATTATGTCCTTAGCCCAGTCAACCCCAGCGATACC
GATATATTCAAAGTACCAATCTCTTACGAAAGGTTCTGGATGAAGTTTAA
TCAAGCATTTTGGAGGCCAACTTGCCCCGCTGGGTATGCTCGATTTGGAA
TCTTAGCTACGGTACAGGATAAAAAGCCTGTTGACGGTGACATCTATTGT
GTCAATGAGGAGTATGCTTTGAAAGGTTCAATGGTATGGGAACTTATTTG
GAAATGGGACCGTGATGCTTACAACAGAGCAGTGATTTTTAAAGGAAAGT
CTGGACAGCCCGACAAAACAGTGGATTTGATCACAGTTTTGGTAGCCCCG
AAGAATACCTATCAAAGTCCATCGCAAAATTACCACTTTTTGTCGAAAGA
ATTTATTGTTGaggaaaattaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000282_pilon | genome | sc0000282_pilon:267203..269299 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 328-885:1540 |
| Aaloc | 277-324:1252 |
| Aaloc | 22-276:23 |
| Aaloc | 1-21:1 |
|
