|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000391_pilon:26532..28238+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032960 ID=XLOC_032960|Name=XLOC_032960|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1707bp|location=Sequence derived from alignment at sc0000391_pilon:26532..28238+ (Clytia hemisphaerica_ch_hm2_pilon)
tttagaaaaagaactattaaaatgtcacaaaatgaaaataaaattatgat
ggaaaaCCTTCCAATTGGTTCAATGAAAAGTGATATTGAGAATGTCTTGA
AAGGTTGGGTCAACGAAATCacaatatcaaaaattgatttggttgataat
aaaaaacgaaaatgcAAAACAGCTTATATGACTTTATCATGCTATTCACA
AGTTCAACAAATAATAGACTTTTACAGCACGAACTTTGATGACCAAGGCT
TTGCATTTGAAGACGGCTTTGCTAATATTGGAATGGTCagagtaaaaaaa
tatataggcaaagccaaaccaaaaaatgaaaatgacttgaACATAAAGCC
CTTGCAAAATGAGGAAAATGCTTCTAATCAAGACACAGAGAGATTGTTTT
GCCCTACAGAGGAGGACTGGGACACTGAAACCTTTGATAACGAAAACACT
CAAAACATTGCTGAGGATTCAAAATATGATGAGAATTCATCTAGTCAAAC
ACTCATGTTTCAACAGTTACCAAACAGAACTACAAAATCAGAGGTGAAAG
AGCTGATTAATCAACTCCAACCTGAAACAAAGATAGCAcatattgatttg
aaaataaacactCTTCATAAGCAGAAACTAAACGCCTATGTAAGATTCGC
ATCCCAATCTGACTGCAATGCCATAATgaacattttccaagaaaagtATG
GTGAAAAAGGTTACTGGTTTGTTAACCAAGGTAACAAGAGTTCTACTCTC
AAACTTATGTTCTATcatggaaagaaaaaagagaccaaacaaaaagtcga
gacaagacaagagccaaatccagagaaaaaagtcgaagaATTCCATGTGT
ATTTGGAGAAAGTACCATCTCAGACAACAAATGAGGAGATAACTTCTATT
TTAAACAAATGGCTACCACCCATTTTCACTGTTTCCAAGGTGGTTTACCA
TAAAGATGATAAACTTTTTCATGTAAAATTACCATCATGGGAAGCTTGCG
ACCTTTTATTGAGTCATTTCAGGGTAAACTTTCAACCCCACGGTGGGTTT
GCTTTCCAAAACGCGAAAGGACGTTTCAATCTAATTGACGTAAAACGTAA
TGAAAGTTTCTACTCAAAATCTACAAAACAAAAGTTAACATTGCAAAATG
ATGCTTCAAACAACTTAGAACTGTTAAAATGTTCATCTGTCTCCTCTTGT
AATGAACTTCATGCAGAGTTGATCTGTCCATCACCTCCTTCAGTGTCGAG
CAGTAATGATTGGAAATCGGTGGATATAAACCTACAAGCTGAAGAAATAT
CACATAATAGTGTTTCGTCTTCTTCTCAACCTTCTCGGATCTCTGGTTCA
CTTGATCCTTTTTTGCCGActaattcaaaagaaaatatcacTAACCATCT
TTTGCAACAAGAAATAGATCAGACAGAGATTGTATTAGAGGAAAATGTAT
CTGGGGAATTGAACACTTTGATGTACGAGAAAGAGGAGCTGGATGATTTC
CGGAAAGAGATCATGTTGCTTGAAGACGAACTTAAAACTAAATGCCCGGA
ACTATTCGTGTCAGAGGTTGATATGATGCTGTTACGCTTGGACTTAAATA
AAATGGAAACAAAGAAGAATGAACTGTTGATAATGAAAAACAAAGCACAA
TCCGAGCTTGATGAACTGAGAGAACAGATAAGTTGCTTGAATGAAGGTGA
cgcttga Coding sequence (CDS) from alignment at sc0000391_pilon:26532..28238+ >XLOC_032960 ID=XLOC_032960|Name=XLOC_032960|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3414bp|location=Sequence derived from alignment at sc0000391_pilon:26532..28238+ (Clytia hemisphaerica_ch_hm2_pilon)
tttagaaaaagaactattaaaatgtcacaaaatgaaaataaaattatgat
ggaaaaCCTTCCAATTGGTTCAATGAAAAGTGATATTGAGAATGTCTTGA
AAGGTTGGGTCAACGAAATCacaatatcaaaaattgatttggttgataat
aaaaaacgaaaatgcAAAACAGCTTATATGACTTTATCATGCTATTCACA
AGTTCAACAAATAATAGACTTTTACAGCACGAACTTTGATGACCAAGGCT
TTGCATTTGAAGACGGCTTTGCTAATATTGGAATGGTCagagtaaaaaaa
tatataggcaaagccaaaccaaaaaatgaaaatgacttgaACATAAAGCC
CTTGCAAAATGAGGAAAATGCTTCTAATCAAGACACAGAGAGATTGTTTT
GCCCTACAGAGGAGGACTGGGACACTGAAACCTTTGATAACGAAAACACT
CAAAACATTGCTGAGGATTCAAAATATGATGAGAATTCATCTAGTCAAAC
ACTCATGTTTCAACAGTTACCAAACAGAACTACAAAATCAGAGGTGAAAG
AGCTGATTAATCAACTCCAACCTGAAACAAAGATAGCAcatattgatttg
aaaataaacactCTTCATAAGCAGAAACTAAACGCCTATGTAAGATTCGC
ATCCCAATCTGACTGCAATGCCATAATgaacattttccaagaaaagtATG
GTGAAAAAGGTTACTGGTTTGTTAACCAAGGTAACAAGAGTTCTACTCTC
AAACTTATGTTCTATcatggaaagaaaaaagagaccaaacaaaaagtcga
gacaagacaagagccaaatccagagaaaaaagtcgaagaATTCCATGTGT
ATTTGGAGAAAGTACCATCTCAGACAACAAATGAGGAGATAACTTCTATT
TTAAACAAATGGCTACCACCCATTTTCACTGTTTCCAAGGTGGTTTACCA
TAAAGATGATAAACTTTTTCATGTAAAATTACCATCATGGGAAGCTTGCG
ACCTTTTATTGAGTCATTTCAGGGTAAACTTTCAACCCCACGGTGGGTTT
GCTTTCCAAAACGCGAAAGGACGTTTCAATCTAATTGACGTAAAACGTAA
TGAAAGTTTCTACTCAAAATCTACAAAACAAAAGTTAACATTGCAAAATG
ATGCTTCAAACAACTTAGAACTGTTAAAATGTTCATCTGTCTCCTCTTGT
AATGAACTTCATGCAGAGTTGATCTGTCCATCACCTCCTTCAGTGTCGAG
CAGTAATGATTGGAAATCGGTGGATATAAACCTACAAGCTGAAGAAATAT
CACATAATAGTGTTTCGTCTTCTTCTCAACCTTCTCGGATCTCTGGTTCA
CTTGATCCTTTTTTGCCGActaattcaaaagaaaatatcacTAACCATCT
TTTGCAACAAGAAATAGATCAGACAGAGATTGTATTAGAGGAAAATGTAT
CTGGGGAATTGAACACTTTGATGTACGAGAAAGAGGAGCTGGATGATTTC
CGGAAAGAGATCATGTTGCTTGAAGACGAACTTAAAACTAAATGCCCGGA
ACTATTCGTGTCAGAGGTTGATATGATGCTGTTACGCTTGGACTTAAATA
AAATGGAAACAAAGAAGAATGAACTGTTGATAATGAAAAACAAAGCACAA
TCCGAGCTTGATGAACTGAGAGAACAGATAAGTTGCTTGAATGAAGGTGA
cgcttgatttagaaaaagaactattaaaatgtcacaaaatgaaaataaaa
ttatgatggaaaaCCTTCCAATTGGTTCAATGAAAAGTGATATTGAGAAT
GTCTTGAAAGGTTGGGTCAACGAAATCacaatatcaaaaattgatttggt
tgataataaaaaacgaaaatgcAAAACAGCTTATATGACTTTATCATGCT
ATTCACAAGTTCAACAAATAATAGACTTTTACAGCACGAACTTTGATGAC
CAAGGCTTTGCATTTGAAGACGGCTTTGCTAATATTGGAATGGTCagagt
aaaaaaatatataggcaaagccaaaccaaaaaatgaaaatgacttgaACA
TAAAGCCCTTGCAAAATGAGGAAAATGCTTCTAATCAAGACACAGAGAGA
TTGTTTTGCCCTACAGAGGAGGACTGGGACACTGAAACCTTTGATAACGA
AAACACTCAAAACATTGCTGAGGATTCAAAATATGATGAGAATTCATCTA
GTCAAACACTCATGTTTCAACAGTTACCAAACAGAACTACAAAATCAGAG
GTGAAAGAGCTGATTAATCAACTCCAACCTGAAACAAAGATAGCAcatat
tgatttgaaaataaacactCTTCATAAGCAGAAACTAAACGCCTATGTAA
GATTCGCATCCCAATCTGACTGCAATGCCATAATgaacattttccaagaa
aagtATGGTGAAAAAGGTTACTGGTTTGTTAACCAAGGTAACAAGAGTTC
TACTCTCAAACTTATGTTCTATcatggaaagaaaaaagagaccaaacaaa
aagtcgagacaagacaagagccaaatccagagaaaaaagtcgaagaATTC
CATGTGTATTTGGAGAAAGTACCATCTCAGACAACAAATGAGGAGATAAC
TTCTATTTTAAACAAATGGCTACCACCCATTTTCACTGTTTCCAAGGTGG
TTTACCATAAAGATGATAAACTTTTTCATGTAAAATTACCATCATGGGAA
GCTTGCGACCTTTTATTGAGTCATTTCAGGGTAAACTTTCAACCCCACGG
TGGGTTTGCTTTCCAAAACGCGAAAGGACGTTTCAATCTAATTGACGTAA
AACGTAATGAAAGTTTCTACTCAAAATCTACAAAACAAAAGTTAACATTG
CAAAATGATGCTTCAAACAACTTAGAACTGTTAAAATGTTCATCTGTCTC
CTCTTGTAATGAACTTCATGCAGAGTTGATCTGTCCATCACCTCCTTCAG
TGTCGAGCAGTAATGATTGGAAATCGGTGGATATAAACCTACAAGCTGAA
GAAATATCACATAATAGTGTTTCGTCTTCTTCTCAACCTTCTCGGATCTC
TGGTTCACTTGATCCTTTTTTGCCGActaattcaaaagaaaatatcacTA
ACCATCTTTTGCAACAAGAAATAGATCAGACAGAGATTGTATTAGAGGAA
AATGTATCTGGGGAATTGAACACTTTGATGTACGAGAAAGAGGAGCTGGA
TGATTTCCGGAAAGAGATCATGTTGCTTGAAGACGAACTTAAAACTAAAT
GCCCGGAACTATTCGTGTCAGAGGTTGATATGATGCTGTTACGCTTGGAC
TTAAATAAAATGGAAACAAAGAAGAATGAACTGTTGATAATGAAAAACAA
AGCACAATCCGAGCTTGATGAACTGAGAGAACAGATAAGTTGCTTGAATG
AAGGTGAcgcttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000391_pilon | genome | sc0000391_pilon:26532..28238 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1707:1 |
|
