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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000175_pilon:150160..153488+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032848 ID=XLOC_032848|Name=XLOC_032848|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3329bp|location=Sequence derived from alignment at sc0000175_pilon:150160..153488+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAtccttcaaatttgtatttttgccGTTGTTTTACATGTTATTTT
AGCTGGCACTGGGGAAAAAGGTATATTACTTTTAAAGTGTCTTCACCAAA
AGCGAGGATATAAGTACGTTTATTTTGGAGACGATTTTGATTACTTTGGA
GATCCAAAGTTATTTACTTTGTTAACCAGCTTGATTTTTAACCCGGTCTG
TACTAGACAATGCTATCGTCAGtataatatattgccattatataatatag
tttgtatattataaaacgtaatgtGTTGCGCAGCGGGTAGAGTTTGTGTT
TACAAGACAACAGCTACCCCCGaaaaaaatcccgtcttcacgtttgttcc
tcttagatgaaactcgtcttagactatagcatagtctaggtATGTACGAG
TTTTGTCTCGGTCCTTATTTGAGcacgggcaatatttctcagtacagtcC
TAACTAACCGGTCCTTATTTTATTAGAGTCACACaaaaaaaTAATCGATC
ACAAATCACCAAATTTGGTTTTGGTTTGTTTCTTGAAAGGTTGTCAATTT
TCCAGATTACCTTGTCATAGGTACCCTTACGATTACCATTTCCATCTACA
CCCCCTAGTCCGTCCCTGGAAAAAGTAACTTTAACATCAGTCATCTATTT
TCATCCAGATTGGCCCCTTTAACTAGCGGAACGAAACAGTAATTGATAAC
TTCTCACCAAGTGTTTTGTTTTGTGCTTGATTGATTAGTTATATATTTTC
ATGCAGGTTACCTTGTTACAAAGAATTACAAGGTTGATCATCTTCCAACA
TGGTCACCAACTTGGTACGTCGCATTTGAAGTGAAACCTCTTTATCGCTA
CTCACATTGGTCCAATCTTCTTCATCTTACTGCGTCCGGTCAAAACCTTA
AACATTTCGGGGATAGGATTCCAGCAGTATTCTTTATACCACACCAACAG
AAGCTTCACATATGTACAGGATTGAACGGGAACAAAAATTTCTGCTACAA
CTCGAAAACTTTACCGCTTCATGAATGGGCTCTGGTAGAGATAGCTCAGT
TCCAAAAAGGAGTCAAGTACTATTACCAGATTCGTATTAATGGAAAACAA
GTACTTAAAGTGTTGAACAAGAATGCTCGTTATTTCATGGGAGTTGATGT
ATATCGTGGCGATCCATTCTATCGACAGGCACCGGCAAAGATTCGAAATT
TCGTCTACCATAATTTACCAAGTGGTAAGTGAGATATTTAAGAGAGTATT
TTAGTCCATTTTCCCCAAGAAGTAAGGCTTTAGAGGAAGGTATCAACATA
GCCAGTTCATGGTCAATTCGGTTCTGAAAAGTCCtttttttCGCAATTAT
TATCCGGCCTAATTCTAATGGTAATACCATATATAACCAAGACTTTACCG
gggtataaaatattttttaattgaatcaGACAacttttattcaatctttt
cactaaaatttctaCCAGGGATGATCTGAAAGGTTATTGAGATGGATATT
CATTTTTTAAGTATAGCCTAGACATGCGTCAAATGACaagtttttatgac
ttttttttaaatgtcccTTTGATTGTTCTCATAACTTTGTCAATAAACCT
TTATGAAGATTTCTATATTGTTTGAATAAGACATGAAACTATCAGTATTG
AAACAATCATTTTAATTACTTCTACTATGATAGGAAGATTTCTAATAATA
CTAAGACCAACCAATTCCAATATAATTCTTTTAACTTTCAGCTTTCAAAC
TCACCCGTAACACCATCATTAAAGGCTACAAAGCATATTTTACCGAATAC
CAAGTTTCATTCAACATTAAACCGTTCGGTAAAGTCAAAAAATGGTCTAG
CATTCTTCACGTGACCGAATGGGATGACATCACGGCTTACGGTAACCGAA
TCCCTGCTGTCTTCTTCTGGCCAAATACAAACAGGTTACATATTTGTTCA
GCCATCAATGGTAACAAAAATTATTGCTGGAACGGTAAAACAGATCTTCC
ACAAAACAAATTCACCAATATCAACATCCGACAACATTTGGTTGGTAGCC
AATACCATTACAGCATCTTGATCAATGGGAAACAAGTTTTCAAGATTGTG
AATACAAAACCGATTACCTTGTATCGTGCTAAGGTTTATCTTTCCAATCC
ATGGTACCTTGCAGCAGAGGCGTTTGTAAAAAACGTGGTAGTAACGACGT
CATCAAAAGGTAAATTAAAAACGAGGCTGTCAAGCCCTTTCTTAATCTTT
TACGCTGATTATGCATCTTTTGTCTCTTATAAAGCAATTGGGTCATATTT
AAGACTTTAAACAGATTTTGATGCCTTTCTGACATCCCTTTCTCATcatc
acagacccactgggaacccaaaatatcgtcccagtGGAAGATTACACTTC
AATTTTTcccccccgctgaaaataataagATAAGCAAATCCTTACTGAAA
GATTTTTCCAATCTCCACTGAATTTTATGGCTAGAAAACAacggaattca
aatccccagccataaagagatatgggaatatcaatccacaTCGACTTTTA
GTCCGtttttttttACCCCATTGGCAGATAAAATCTATCATTTTATTAGA
TTATAAGATTTCGTGAAATGAAGGTGTTTTCAGTTTGATTCCGCTCTGCT
CAGGAATTAAGACAAGGATAAATGCAGCAATCTAGTCGGTTTGCCCTCAA
TTGCCCTCGGATACTACCTTCAGAGGGATGTTTATAAAGGATGTCCAATA
GTACCTTGTGAGAAAGTGTATAGGCAAGTAAAGTCTTCTTCCAAAatatc
tttgaataaaaattccaaaatatcattgaaatttatattttctatttaag
gtggttttaaacttttaaaagggAAAATGATCCGTGTCATACCAAGAATA
CAAAGAGAATGGTATCTCTCATTCGACATCAAGCCTGAAAACGCTGTCGT
CCATCACTGGGCTAGTATCCTTCATATGACTACCGGTGGCAACCATGGTA
GGATCGGGCAACGGATCCCAGGTATCTGGTTTCACGGCAAAACCCGTAAG
CTTCATGTATGTTATGCCATCAACAAGAATCCTAACCATTGCTTCAATAC
GCTTTATAATTTAACACCGAACCGCTACAGCAATATTCAAGTTTTACAAG
TCTTTGATCGTTTGGCAAAGAAATACAAATTTAAAGTGCTGgtcaataat
aattttcttgCTGAAGTTTGGAACTCGAACCCACTCTCTTTTCAGAATGT
TCAAATGTGGGCAGCAGATCCTTGGTATCTTACTGCAAAGGCTTCATTGA
GGAATATCGTCTTCAGAAACTTATGCTAG Coding sequence (CDS) from alignment at sc0000175_pilon:150160..153488+ >XLOC_032848 ID=XLOC_032848|Name=XLOC_032848|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2970bp|location=Sequence derived from alignment at sc0000175_pilon:150160..153488+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAtccttcaaatttgtatttttgccGTTGTTTTACATGTTATTTT
AGCTGGCACTGGGGAAAAAGATGGCGAtccttcaaatttgtatttttgcc
GTTGTTTTACATGTTATTTTAGCTGGCACTGGGGAAAAAGGTTACCTTGT
TACAAAGAATTACAAGGTTGATCATCTTCCAACATGGTCACCAACTTGGT
ACGTCGCATTTGAAGTGAAACCTCTTTATCGCTACTCACATTGGTCCAAT
CTTCTTCATCTTACTGCGTCCGGTCAAAACCTTAAACATTTCGGGGATAG
GATTCCAGCAGTATTCTTTATACCACACCAACAGAAGCTTCACATATGTA
CAGGATTGAACGGGAACAAAAATTTCTGCTACAACTCGAAAACTTTACCG
CTTCATGAATGGGCTCTGGTAGAGATAGCTCAGTTCCAAAAAGGAGTCAA
GTACTATTACCAGATTCGTATTAATGGAAAACAAGTACTTAAAGTGTTGA
ACAAGAATGCTCGTTATTTCATGGGAGTTGATGTATATCGTGGCGATCCA
TTCTATCGACAGGCACCGGCAAAGATTCGAAATTTCGTCTACCATAATTT
ACCAAGTGGTTACCTTGTTACAAAGAATTACAAGGTTGATCATCTTCCAA
CATGGTCACCAACTTGGTACGTCGCATTTGAAGTGAAACCTCTTTATCGC
TACTCACATTGGTCCAATCTTCTTCATCTTACTGCGTCCGGTCAAAACCT
TAAACATTTCGGGGATAGGATTCCAGCAGTATTCTTTATACCACACCAAC
AGAAGCTTCACATATGTACAGGATTGAACGGGAACAAAAATTTCTGCTAC
AACTCGAAAACTTTACCGCTTCATGAATGGGCTCTGGTAGAGATAGCTCA
GTTCCAAAAAGGAGTCAAGTACTATTACCAGATTCGTATTAATGGAAAAC
AAGTACTTAAAGTGTTGAACAAGAATGCTCGTTATTTCATGGGAGTTGAT
GTATATCGTGGCGATCCATTCTATCGACAGGCACCGGCAAAGATTCGAAA
TTTCGTCTACCATAATTTACCAAGTGCTTTCAAACTCACCCGTAACACCA
TCATTAAAGGCTACAAAGCATATTTTACCGAATACCAAGTTTCATTCAAC
ATTAAACCGTTCGGTAAAGTCAAAAAATGGTCTAGCATTCTTCACGTGAC
CGAATGGGATGACATCACGGCTTACGGTAACCGAATCCCTGCTGTCTTCT
TCTGGCCAAATACAAACAGGTTACATATTTGTTCAGCCATCAATGGTAAC
AAAAATTATTGCTGGAACGGTAAAACAGATCTTCCACAAAACAAATTCAC
CAATATCAACATCCGACAACATTTGGTTGGTAGCCAATACCATTACAGCA
TCTTGATCAATGGGAAACAAGTTTTCAAGATTGTGAATACAAAACCGATT
ACCTTGTATCGTGCTAAGGTTTATCTTTCCAATCCATGGTACCTTGCAGC
AGAGGCGTTTGTAAAAAACGTGGTAGTAACGACGTCATCAAAAGCTTTCA
AACTCACCCGTAACACCATCATTAAAGGCTACAAAGCATATTTTACCGAA
TACCAAGTTTCATTCAACATTAAACCGTTCGGTAAAGTCAAAAAATGGTC
TAGCATTCTTCACGTGACCGAATGGGATGACATCACGGCTTACGGTAACC
GAATCCCTGCTGTCTTCTTCTGGCCAAATACAAACAGGTTACATATTTGT
TCAGCCATCAATGGTAACAAAAATTATTGCTGGAACGGTAAAACAGATCT
TCCACAAAACAAATTCACCAATATCAACATCCGACAACATTTGGTTGGTA
GCCAATACCATTACAGCATCTTGATCAATGGGAAACAAGTTTTCAAGATT
GTGAATACAAAACCGATTACCTTGTATCGTGCTAAGGTTTATCTTTCCAA
TCCATGGTACCTTGCAGCAGAGGCGTTTGTAAAAAACGTGGTAGTAACGA
CGTCATCAAAAGgtggttttaaacttttaaaagggAAAATGATCCGTGTC
ATACCAAGAATACAAAGAGAATGGTATCTCTCATTCGACATCAAGCCTGA
AAACGCTGTCGTCCATCACTGGGCTAGTATCCTTCATATGACTACCGGTG
GCAACCATGGTAGGATCGGGCAACGGATCCCAGGTATCTGGTTTCACGGC
AAAACCCGTAAGCTTCATGTATGTTATGCCATCAACAAGAATCCTAACCA
TTGCTTCAATACGCTTTATAATTTAACACCGAACCGCTACAGCAATATTC
AAGTTTTACAAGTCTTTGATCGTTTGGCAAAGAAATACAAATTTAAAGTG
CTGgtcaataataattttcttgCTGAAGTTTGGAACTCGAACCCACTCTC
TTTTCAGAATGTTCAAATGTGGGCAGCAGATCCTTGGTATCTTACTGCAA
AGGCTTCATTGAGGAATATCGTCTTCAGAAACTTATGCTAGgtggtttta
aacttttaaaagggAAAATGATCCGTGTCATACCAAGAATACAAAGAGAA
TGGTATCTCTCATTCGACATCAAGCCTGAAAACGCTGTCGTCCATCACTG
GGCTAGTATCCTTCATATGACTACCGGTGGCAACCATGGTAGGATCGGGC
AACGGATCCCAGGTATCTGGTTTCACGGCAAAACCCGTAAGCTTCATGTA
TGTTATGCCATCAACAAGAATCCTAACCATTGCTTCAATACGCTTTATAA
TTTAACACCGAACCGCTACAGCAATATTCAAGTTTTACAAGTCTTTGATC
GTTTGGCAAAGAAATACAAATTTAAAGTGCTGgtcaataataattttctt
gCTGAAGTTTGGAACTCGAACCCACTCTCTTTTCAGAATGTTCAAATGTG
GGCAGCAGATCCTTGGTATCTTACTGCAAAGGCTTCATTGAGGAATATCG
TCTTCAGAAACTTATGCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000175_pilon | genome | sc0000175_pilon:150160..153488 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1009-1485:2853 |
| Aaloc | 541-1005:1744 |
| Aaloc | 73-537:759 |
| Aaloc | 1-69:1 |
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