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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000392_pilon:84944..92068+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032698 ID=XLOC_032698|Name=XLOC_032698|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7125bp|location=Sequence derived from alignment at sc0000392_pilon:84944..92068+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGGTCGTGGCAATCGTCATTTCATCTTTTATCTTAATATTGACACAAAC
TACGGATAGTACGCATGCGCTACCAAGACACAGAGACATTCGTTCAACGA
GTACTGGTAGTAGAAAGGGTCGCTTATCAATTACCGTGGTTCGagaattt
ttagataaaaacagAAATCCTGAAAAAGAGATTGAAGCTGTAGAACGGAC
TTCATTGAGTGTGAGAACCACGTCACTTGGTGCTGGAAGCAGTAGCGTAG
GGGAACCATCCCATTCACGGGAACCGACCTGGTTTTCACGTAATGGATCg
aacaatttcaagaaaatgaaacGACGCAGTCGACGAAAGAGGCAGAAACG
CGGAGCAAAAGTTAACACGGATGCTGCTTACATAAGCGAGTTCAAGACGA
ACCAAAGAGTATATAAGTATTGCAACAAGTTAGGATTTTGCTTGCGACTG
AATGCCGATGGGAAGGTCGACGGTACGAGAAACAAAGAGGACCCTTACAG
TAAGTGTACTCAAATCCTTTCTTTAGATTCTGTACAGTTTGAAGTACTTT
GAATTTTTGCCGCGATTATTTTTCTTGATGTATAAGACTATACTTCATAC
TGGCATATTGACTTTTCAGGGTGTTAAATTACTTTATTTTACCCTATTTT
TCGTAAATACAAAGCTCTCATAAAGgaagaatatgaaaaaataagaGCTA
ATAAAAATTCCtacgcaatttttgaaaacaaaactgttATTCGATTTCTC
ACTCGACTATGGGAAGTGATAAAGTTCCTTATAGCAATGCCAAAAAATAC
TGTCAATCATAATAACAAACTCGACACCGTTCAGCCGCAGAAACGGGGGT
AGTAACGGTAGTTTAAGGATCCTGAGAGCTTAAACTTTAAAAGAGAAAGA
ATTTTAATTAATTGATTACACGCCGTTAAGACAAAACAACAAgcgaagat
ttttttttacaaaacaagAGAAATcttatgttttcaatgaacACACATAC
CGCAGCGGGGAAAGTGGATTAACCAGAGTAAGAGATACCTAGTGATAGAG
ATTAGTAGATTGtgcaaaaaacattttcctgcTTTTCTCAAGGAATCATT
ATTAAACAATAACAACTAGATCAGGATTTAGACGGGTGGCAATATTGCTG
TTGATATTGATTTGAGTTGAGTTGTGTTTCAGATCACTAAGACTAGAAAG
ATCATCAAGGTCTGAAATCAGCTAAAAAGACGCAGTATATTCTTCAAATC
TGAATACATACCCAAACCTCAGAGTTTAAGTTTTGTCATTAAACATGTTG
TGTATCAATTTTGTTGTGTATCAATTTTACTCAAGAAAATTAAATCTTGT
TTTCCTCTAAGACGCTGTAGTTACACTACAGTATCAATAACTACAAAATC
CGATAAATTAACCACACAACACAAGAGAAAACATATATTATTGTATCATC
CCCTCCTCCCTATTTAAATCATTATTGTGATTAATTTAACGATGGGATTG
GATTTTGGTGTTATTGTCACATGAAGTAGTAATGTTGTAATGTAATGACC
GTAAAAAGTACATTCTTTACTAAGCCAACTAAATGTAATTGATTAGATCA
GTAAGTTATTACATACGTTGCGGTATGGGAAAGATTAGAAGGGGTTGTTT
ACTAAGCATAATGTTTTTGTCTTCAACCGCTGTATGGGGTTACTCATTCT
CTGTTTTCTCTAAGGCCACAATTTTGTTTTTCGGAAAGATGTAATAAAAT
ATGAATCAGTTTATTACACCGTTATTGAATTTAGAGTATATTGATACTTT
GTGTTTGAGTATCGAGctatcttctttttttatccAAGACATGAAGTTCA
TGTCCATATCGCCCTTAAAACTTAAAGCATATCATATGTACCGTGGAAGT
TAAAAACcgttaaacttttttgaatGACATTACCCAGCTTGAAAGGTAGA
CACTTTCCAGAGAGAGAAGTGAAAGAAAATCCATGTAGCGACAGCCAAAA
GTTCATGTGTAGATGTGGAATTTTACAtgttgaaaaacttttgatttctc
ttcgatgtaaatttgtaaatactgtATGAACAAATCTAGTGGGCGTGTTT
CTTAGCTAAACTATCTAAATTTTCAATGGAGAGAAAAATTCTCACTTAAT
ATCCATCAATAGACATCTGAATTGATACTTTGGATGGGTGACATTTGGTA
GGGTCATTCATCTTGAGAAAAGATCCCAAAATAGAGACACCTGTTTAGAT
TATTATTCGAATCATTTTGACAGTCTTAGCTAAAAGGTCTGGATCGAAAG
TACTGCACTTTGAATGGCATTAAAAATTACATATTTTATTGATTAAGGGC
ATCAACAATGAAGAAATTATTCTGCcttattttgaatctttttttactAT
AAAAATTATCAGAACCGCTAATTTGATTTGAAGGCGTTTCTTGAGATTCA
GAAAGATTTACAGACGCACCGACATTGGTAAAATTGTattgaaattcaag
aaaaataaaggtCTTGTGGTCATTTCCGAATTCCACTTGTCTATAATGcc
gaatctaaaaataaaattcattagCTATTATTAATCGATAATTAATCATC
AAAGTAAAGCATAtgacttttaaataaaaagcgTGCGATTTCAATTaatc
ttttcaaatcaaaagtaTCAGCCAaatccttttgtattttatatGACAAC
TCGCTTTGACTTTGTCAGGTTTCTATTTTTTGTGTGTGCGAAGGAACATG
ATTaaaaaaaTCCTTTGACGACGTCACAGGAAAGCGTTAATTAGTTCCGT
TAGAGGCTGTTTTAGATTAATGGGTTATTCTATCATTGCTTTAAATGTGT
CTTAACTGAATTCCTGCCTTCTTTATTTGGTAGAGATTTGAGTATTCAGA
TCAATTCAGGCAAGGATTGTTTCGCTCTAAGAAAGATATTTCTATTGGCT
CTATTGCCACATCACataattttattcaactttttatccttatttaattt
tttttcgaattttttcgtccaaaaattgaaagtgaTCATACTAATACTGT
AGGTTGAAATTATTGTGCGagtatttttttctcctttcgattttatttta
tttctccTTCAACATGTAAgaataaaaagttttgcaaATGGTAAAGCTAT
TAGACTGTCACAGCCTCCGGCTTTCagcattgtaatttttttctaccTTG
TCGTACAGTATGTGCTATGTCTAGAAAGAAAGAATAAATCTCGACGTGGA
GAAGGCGTTGAAAAGGAAGCTAGTTACGTTGATTAGAACAATGAAATATA
TAGGACTGTTAAATGACATCTCAGGAATTTCAACTTAAATGACAGATATA
TGACTTCTGTGATAGTCAAattctatagaaagaaaaaaaaagaatacgAA
GTTTCCATTATTATATAGAAAATATCCATTACCGGTTTACCCAGAGCTAA
TATCTACGGGAATATTTTTTGTTCCTGATATTCAGACATAAGTTTTCATC
ACTCGAATActtttgtaaaatatgaaaatcaaatatcattATACAAAACA
CCAGACACTTGGTCATTAGGATGCATGGGGAAATGCACCTTTTCCaccgt
agctgccaattgccgcgcgggcatttatttgtccgttttaccaccctaaa
accgtcccagtctttttttgcccctaaagacaatagaaaaaagtgtaaaa
aaaaggattggatcgattttagggtggtaaattaaataataaagtgacac
GTGCCTGACCGCGtaactacggtcgaaaaggtgtattgaaagttGTTCAA
AAGTAATTTTCCTGCAAAGCTTCTTTCTTCTCATTAgtaaagatattatt
tttaaaGACTTGACGTCCTCAATCTGTTAAGTCTGTCGAGGATCTACCAA
TTGCATGCGAATAATCATAAGCTTCTAGTATTAAAAACCTTGCGATTTGA
TACAAAAAAGTAACGAGTAGGCGATACTACCGTATGTTAAAACGCGTCAT
TTTTGTTGTCTAGCACGTTCAATAAAATATTGAACGAGAATTGAACGGGG
AAAACCCTCCCGTTGTGATTCAATGGAAACATTCTCATTGAAACATTTTa
atgttcttttttcaaaacactAACATCTTCTTTAGTTAAATCAACATAAA
TGAGTGAGAAATGCGAAGGGGATAATGTCGATTTCACtaaaagaaaagtt
tgtgtTTTCGAATAGCTACATGAATATGTTCAAATGATAGCTAAAACAAC
AATTGATAATTCTTACATAAATCTTCGATCATTTTATATAGTACATAAGC
AAGTCTAACCAAGAGCACTGTTAAAAcatttgtttttattctattttagc
TGTCCTGTTATTCGAATCACATGGTAGAAGCATCATACGTATCAAGGGTT
ATTACGCCAACAAATATCTAACGATGAATCAGAAGGGTGTGCCAGCAGGC
GAAGTAAGAtatttttgccaggtcttgaaccttttttatttctttcattt
attactttctcttatttcttttaaattcttttacTCCCTAATTCCTTGAT
TTTACCAGATTAATCGAGTTTCTAAACAATAATTTTCCAAGTAAGGCCGc
tggaaaatatatttcaacctCAGCCACAATATTCATATTTTCATTCGGAA
ATCATAAAGGAATCTTATTTGCAATGGAAATATTTTGCAGATATTCAAAC
TATTCTAAAAACTGTagtagaataaaaaaaatgtgattaAGAAGGGTTTA
ATTTTGAAAGCAGTTCCGTCCGCATTGCATAGCGATTTAAAAGAATAAAG
TCCCGTCTCGAAGTATGACTTAGCAGTTGAACTTTTTCCTTAACAGAGAT
CAGCTAAGTTCGCCAAAACATCCATTCATTTCAAATAGAATCAGGAAAAA
CGTCAGCAAAAGCTGATGAGCACAAACTATAGAAATAATGAGATGTGCTA
TTTTTTAAGACGACAGTACGACTTTGTAGATCAGGAAAGCATTActcaaa
agtcaaagaaaagCTAAAACTATGAATCGAAAATGAATGTCCATAGTGGT
GAAAGAAAGTATGAACTGTGCACTGTTATGAAAAATGATACGTTAACTAT
ATCAAGACCCTTTTGCTTGTTTGCTCAGCCATGAGGGCTTCTTAAGCCCC
ACTTCTTCATCAAGGTCGTCGAGGTCATCAAGTACTAtttttttCGGCTT
CACTAAATCAATGCACCTGTATATACCATAGTACTGTCAATAAACTTTCA
TTTGCAGAACAAAAGAGGTTACAATGATAATGaaatcatttattttcaaa
agaaaggtCATAGCACTATTTTTGAACACTTCaaaaaagatgaaagtgaa
aagtgaagaagaaacaaagGAATTTCAGGATGGAAATGGCAGACAAAAGA
TACGTCAGTGACAAGGATTCGAAAAAGGAATTCACtattttataacattt
tgaCTGATGCGTGATGGATAGTCGTGTCACAAAAAGTTCGACAACATATC
AATACGAAAACAAAGACTACAAAATTGGATAGTCTTTCTTTCAATTAGCA
AATCAAAATTCATGCAGCcatatttcgaatttttgaGTACGTGTCTAGGA
AAGCTACTAAAAATATACATATTATGATACTAGCATCATTTGAAGTCATA
TTTCATTACAATTAGAACATAGCTTTAATTGAAATAATCTTAATTTAGGA
TATTTTAGATTTCCTGCCTTTTCCTGACGatctataaagaaaaaaatatt
tctctagACATTGGGAAAGAGGAACCAGTAGTGGGCCAAAAGATATCCAC
ATTCCATAACACTCGTTTCCGGACCTCTGTTATGTGAAATGCAGGATGAA
ACTGAATATAGAGGTTGTATAAGTATTATGTTAAAAACAGGATAACTATA
TTTCTAGATTACTCTGTCAGTACAATTATGATATCCTTTAGTCTCAAAAC
GAGGCTACAAGGTCATAACTGTGAAACTATGAAACAAAACAATAGATTAT
CTATAACAGCTACagtaaatgcaaaaaaaagaatcattttTAGAGTTAGT
CCAAAAGTCTcttattttggatgttcttataaaaaaacgtgtaattcaaA
AGTAGCTAGTAAGGTTACTAGCTATTGGACAAGTTTAAAATGGCATTAAT
TTATGAAGTGTCTAGGTTGTATCCTGTTTCTGTCACAGAGGATTTGAATA
TTCCCACAGGTTTATCATAAAAGACTTAACCAGCATGAAACACTACATGA
CCACCAACTGGGTCAAGACAATAATTCATACCTTGTAACCCGGAACTGGG
TTAGATCAATACTACTTAGTCTTAATTACGTAGTCAATTGCATCTATTTG
ATCATTATGTGTTATGGATTATTAGATTAATTAGTGATTGTATAGAATGC
AAATAATGAAGGGATAATCGATTGGTTAATGATCTTCTATTGTTCTTTGT
CCCAAGGATTTATGCGATTATCGATTGAGGGTGGTAGGAGTTTCCCCTCC
CAATTAAGTTAACGatgatcaaaataatttctctgCCTCCAGGATAGCCT
TTcattaaagaaggaaaaattcaACATTGCCTTTGGGGAAACTCGATTAA
TCTGTTAGTAACCTTTCTGGATCTAAAATGAGTAGAAAGGACTCTTTTTT
ATCCTCAAAATTATAGAATGGCTGGCTATATAACCTTATAGGCTCTATAA
AGATTGTATTAGAATACCACTCAATTTTGAAGTTTCTCACCTAATAAACA
ATCATGCATAAGTCAACAGTATATTATAAGTGTTCTCCAAAAAGTCAGTT
TGAAACCCTTTACTCATATGCAAAATCTatcgaaattaatttttttcctc
cattttttttttccttcaggCTGATCCACATTTTTTCGACAGCTTATTCC
GTTTAACAGAAGAAGAAAATAGATGGGACACTATCGCATCATTAATATTT
CGAAGAGAAGGTTTGATATGCTTGTAGGGATAACAAAGACGCGCAACTAA
AACAACCATGGAAAGCTAGTCCAGGACAATATGCAGCTCAATTTTTACCA
TTACCTTATGAAATTAAGGATAATTTCGTTGAAGAAATGCGTCTGAAaga
tcaacaaaagaaatcaacaaaGTAG Coding sequence (CDS) from alignment at sc0000392_pilon:84944..92068+ >XLOC_032698 ID=XLOC_032698|Name=XLOC_032698|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1754bp|location=Sequence derived from alignment at sc0000392_pilon:84944..92068+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGGTCGTGGCAATCGTCATTTCATCTTTTATCTTAATATTGACACAAAC
TACGGATAGTACGCATGCGCTACCAAGACACAGAGACATTCGTTCAACGA
GTACTGGTAGTAGAAAGGGTCGCTTATCAATTACCGTGGTTCGagaattt
ttagataaaaacagAAATCCTGAAAAAGAGATTGAAGCTGTAGAACGGAC
TTCATTGAGTGTGAGAACCACGTCACTTGGTGCTGGAAGCAGTAGCGTAG
GGGAACCATCCCATTCACGGGAACCGACCTGGTTTTCACGTAATGGATCg
aacaatttcaagaaaatgaaacGACGCAGTCGACGAAAGAGGCAGAAACG
CGGAGCAAAAGTTAACACGGATGCTGCTTACATAAGCGAGTTCAAGACGA
ACCAAAGAGTATATAAGTATTGCAACAAGTTAGGATTTTGCTTGCGACTG
AATGCCGATGGGAAGGTCGACGGTACGAGAAACAAAGAGGACCCTTACAC
AGGTCGTGGCAATCGTCATTTCATCTTTTATCTTAATATTGACACAAACT
ACGGATAGTACGCATGCGCTACCAAGACACAGAGACATTCGTTCAACGAG
TACTGGTAGTAGAAAGGGTCGCTTATCAATTACCGTGGTTCGagaatttt
tagataaaaacagAAATCCTGAAAAAGAGATTGAAGCTGTAGAACGGACT
TCATTGAGTGTGAGAACCACGTCACTTGGTGCTGGAAGCAGTAGCGTAGG
GGAACCATCCCATTCACGGGAACCGACCTGGTTTTCACGTAATGGATCga
acaatttcaagaaaatgaaacGACGCAGTCGACGAAAGAGGCAGAAACGC
GGAGCAAAAGTTAACACGGATGCTGCTTACATAAGCGAGTTCAAGACGAA
CCAAAGAGTATATAAGTATTGCAACAAGTTAGGATTTTGCTTGCGACTGA
ATGCCGATGGGAAGGTCGACGGTACGAGAAACAAAGAGGACCCTTACAcT
GTCCTGTTATTCGAATCACATGGTAGAAGCATCATACGTATCAAGGGTTA
TTACGCCAACAAATATCTAACGATGAATCAGAAGGGTGTGCCAGCAGGCG
AAGTAAGAtatttttgccagcTGTCCTGTTATTCGAATCACATGGTAGAA
GCATCATACGTATCAAGGGTTATTACGCCAACAAATATCTAACGATGAAT
CAGAAGGGTGTGCCAGCAGGCGAAGTAAGAtatttttgccaggCTGATCC
ACATTTTTTCGACAGCTTATTCCGTTTAACAGAAGAAGAAAATAGATGGG
ACACTATCGCATCATTAATATTTCGAAGAGAAGGTTTGATATGCTTGTAG
GGATAACAAAGACGCGCAACTAAAACAACCATGGAAAGCTAGTCCAGGAC
AATATGCAGCTCAATTTTTACCATTACCTTATGAAATTAAGGATAATTTC
GTTGAAGAAATGCGTCTGAAagatcaacaaaagaaatcaacaaaGTAGgC
TGATCCACATTTTTTCGACAGCTTATTCCGTTTAACAGAAGAAGAAAATA
GATGGGACACTATCGCATCATTAATATTTCGAAGAGAAGGTTTGATATGC
TTGTAGGGATAACAAAGACGCGCAACTAAAACAACCATGGAAAGCTAGTC
CAGGACAATATGCAGCTCAATTTTTACCATTACCTTATGAAATTAAGGAT
AATTTCGTTGAAGAAATGCGTCTGAAagatcaacaaaagaaatcaacaaa
GTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000392_pilon | genome | sc0000392_pilon:84944..92068 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 718-891:6952 |
| Aaloc | 709-717:6942 |
| Aaloc | 631-702:6870 |
| Aaloc | 511-630:4352 |
| Aaloc | 10-507:1 |
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