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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000392_pilon:95136..103568- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032662 ID=XLOC_032662|Name=XLOC_032662|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8433bp|location=Sequence derived from alignment at sc0000392_pilon:95136..103568- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCTCCAACAAGAACAACATCAGTCATTTTCAGACCAAATAGGTA
AGCTCATTTCTTTGAAATTTAACCATAAAGTAACCATTTTTGTAAGTAGT
TTGATTATTTTATAAAGTTCTAATATCGCAAACTCTGGCACAAAATAATC
TGCAGTGGAGACTAAAACTTTACTAAAACTTTACTTACACTTGCTTTAAC
TTATGATAGAACCCGATTCAGGGGGCTCAGTACTATAATCTCAGGCATAT
ATGTGTACGTGAATCTTTAACATACTACCTCCCCACTCTAAAGAAATGGT
ACACACATGTACTAGAATTTTTGGGAACATTTTGACCCGCAGAAACCACC
CTATTTTTGTCTTCTCAAAAGTATCTAATTTTGGAACATTCAGACAAAAG
TTGTATAAAATTTGCCACTACTGGCAAAAACCGGGGTCTTTCCGTAGAAA
ACATTACGTCATGAATATCATTAATTCATTCTTTAAATTTGAGTTGGACT
TAGGAAATTTTCTTCTAATGAGAAAGTTTTAAATTCTGAAAGTTTCACTG
AGAAAGATAAAAACTGACCAAAATCACTAATTTTAGTACTAATAAGGCTA
AAAGATCTTTGATACTTTAGTACCCCAATGTGCTAAAAGTACTTTTTTAG
GAATGCCACCACGTCACTAAATAACATGATTTCTGAGATTTAGTACCGAG
CACCGTATCCGTTGAAAAGATAACCAACATATAAAAAAATTGTACACCCC
TGTGTCACAGTCCGCTTGGACCCCAGCCCCACTGAAAAATTTGGTAAAAA
ATTCGTCCCCGGTATGAAAATACCTTAGAATTTCATCATCACTCGGAAAT
TGCCTTTGATTTTAACCCACTTCGAAATTCAATGTTTAAAAATTGCACTC
AAAAACCATCCCCACTGGATTTTTTAACCTTGGAACAATAGAATTGCCAT
CCCGATTGGAATTTCAATTGGGATTTTTTTATCACCTCTGAGGAAAGAAC
TTCCATCGGAGCTGTAAGACAGGGGTGTAATTGTTAAATCTTGGAATGTC
AGTTTTGAATTTTGAGAACTTTTTCCCTCTTCTAGTAGAACTGGGCCCTC
TGAATAGGTGATCAATATTTTTGACAAATTTAGGGAATTCCCTGGCCTTG
GTAGGATCAAAATATTTATAATCGGTTTGTTCAAAGAATGAGTAATCATT
TACTTGATCTTTTTTATAAGAAACTAAGAACTTGATGCTTAATTTTGACA
AAAACCTGAGAATAAATTAAGAACAATTATTTTCCTTGCCTCAGATTTCA
GAGATGACTGCAAAAGACGCCGATATCAATCCTCTTTTATAAACATTTTA
AGAGCATTTAAACCTGAAAATTACGAAAAAATAAGAACTGCCAAGCCTCA
GTCTAAATTTACCAGTTCTTATAAAAAAGCCTGTTTTGAATGTCAAGTAC
GTTTTAATATTCCCCAGTAACCAGGTCTTACCATCTTGTTTATACGATAT
CAAAAACCGTATCAAAAAACTTATTTCCATACAAAGAAAGTATTTAAAGG
GTATATTGTAAAAGACTCAGTAAGTGATTGTATTATTTGTCAGAATGTTA
TGAGATTGCCCTTATCATTTTCATTGCCCTGAACACTCACTCGGCTAGAC
GAGCTAGTCTTTCTGGTTGAAGTTGAATTATGTTTTGGAAGAGGTAAGGG
AGGAAAGAGAAGTTCTTTTCTGGAAATATTCATATTTCTAATCAACAGTC
CTGTCTCACCAGGCTGTACAGGGAAATTTACTAAATCAAGCTACTTTATT
GCATCAAACAAGATTGGACATAAAAGTCACACTGTATATAAGTTCGGTAA
CCCAATAAAGAACTAGACTATTTTTAACGGTAAAATTTTTCGTATTGATT
TAGTCCCGAAATATTTACCTTTCCATTCATTTTTTAGGTCATCAAGTAAA
GAAAACCAAGGTAAGAACCCGAAGAACCCAAAGAAACCTGAAGTACTTGG
AATTACTTTATATTTCCTGCCTTTAACTTGTTCCATCTCTCAACGATTAG
CTGCTTTACTTTGAATAGGCGCTTTTTTTATAAAAAAACAATTTTATAAA
AGATCACGACGCTAAAAATCAGCCAAAACCTAAGAACAAATTAAGGACAG
TTTTAAGAACAATGCTGAGCCTCAGATTTCAGAAATATTGCTATTAATCA
ATATCATATTAGTTTCTTCAGCTAATCGAAAGACTTGGTCACCCGAAGAA
CTGGCAACTTTTCAATATCCTGAAACAGAAGGACAAAGGTATGTAGTAGC
GCTCCCGCCAAAGCAAAAGGCTTCTTACTTAAATTTTCATCTTGAAAACA
ACTTTAGCCAGAAAGCACTCAATTTTTAAAGGAGTTCTCAAAGTTACAGT
GACTTTCCCAGCAGTGTGGATGAGAGCTCAGTAAATTTTACAATCCCTTT
CCTTTTCTTGGTTTCTTAGAATTTTGTTAATCTTTCTTCTTACTTTGCGT
TCACACTTATTTCAGTAGCCCATATTCAGGAAGAAGTTTGACAATAGAGT
ATGGCTCGAGATCATCGTTGCTTGAATCAAGAATACCGATTGCTATAGGG
TGAGAAAATTTGAATTATCGCAGCTTCAATTTTGTCATCATGTGTTTATT
TCGAGGGCAAATAATGAGGGTGACTTCGAAAACTCAAAAAATGAATACAG
TAGACTCTCTCTAATTCGAGTCTCAAGAGGGAAAAAATTTTATTCGAATT
ACAGAGAGATTTGAATAGTAGAAAGTGTTTTATTAGAGTTTCCTAACAAA
AACTGACGGTGACTTAGATTTCGTTCGAATTATAGAAAGATTCGAATAAT
AGAAGTTCGAATTAGAGAGAGTCAACTTTATTCTTTTTTAGGGGTTTTGT
CTTCACAGTTCGTGTATCAATATTAAGATTGAAGTTTTAGAATTCTGGAC
TGATCAGTACCTAATCCGATTTTTGTTTTTGTTTCTTTAGGCGCAGTAAG
AAAGATTTGCGAGGTAATATATCAATTCTGTGTGCCATGAATAGTACGAG
AGTTGGAATAGTACATCGAAATACAGCACATTGATACTCAATATTGAAAT
CCTCATTATGATTTAGGCTGCACACATCCCTCTGATATGTTTTGATATAG
GGGATGCTCATCGTGTATAAAATCCCCGCTCGAGACTTACCCCCTTCTTT
TTTATTTTTGCTTTTGAAATTTTATTAGCTTGATTAGAAAGTTTTATATG
AGGGATCTTTAAATTTCATTAAATTGCAATTTAAAATTTGAATGGCTAAA
AGCTAATGCAATGCAATCATTGGATTTGTAAACTTTGTAAAGAAAATTGA
AAGAGGTTACCTCAAATTTGGGGTAACTCTCGGCGGAAATTTTATACACG
ACTAAGCATTCCATATCTCAAAATATATTGGAGGGGATGCTTGAAGTCTA
TATATCCCTGGACTGGACATTTGATAGCTTCTTTTTATGATGTTTTTTTT
TCAGCAAGTCGCGATTCAATACTGAGCACTGATTCATCCATAAGCACCGC
ACCTAACACGTAAGAAGCTTTTCTGATCCGTTAAGCCTTTAATGTGAAAA
TATCCTAAATTGGAACTGAAACTGAACCTTAAAAATCATTAGGTATTTTG
CTTTTTTTTTGTCGAAAACGGCTTGGACGATATGGAAGTGTTATCGCACG
CTATCGCACTTTTTTATACGAGCCTTTATTGGGCTGTTCCATTAAATTAT
CATACAGAGGGTGGTTTACCCCCTGGATATGTTCTTCCACCACGTATGGA
TATAAAATGGAATGGTACACTAAGTTTTACAGTTTCTAGTGACTATAAAA
CCCAACCCAAAATATTCTTTTTTGCATATGCTGTAACATCCCGCGAATAC
AATGTTTTTTTAACCTTCTACATTTCAGTAACCAAAGATTTATACGCGAT
GATGGAGCAAGTAAGCCATTGTTATTTTTCGAATTTACTACCTTTCCAAA
ACTTTCAAAATTTAATTATTTGGTAGGCTACGTCAAATCTTATGGCGCGC
CAAAAGGCTTTTTAATACCAACTTTTTTTTATAATACCAACTTTTTTTAT
AATACCAACTTTTTTTATAATAGCAATTTTTTTTTATAATATCAACTTTT
TTTTATAATACCAACTTTTTTTATTATAATACCAACTTTTTTTATTATAA
TACCAACTTTTTTTTATAGTACCAACTTTTTTTTTAGTTCGAAATTTTTT
CATAACACCAATTTTTGTCTCGCTTACTATGCGTGTATAATCGATCAAAT
GTAGAAGGAGTCTTAGCGCGATTACACCTCTAGCCTGGAGGCCACTTAAG
GTTTTTTGATAGACTGGATGACACGATTCTCTAATTTCATGATATGCACC
ACTGGAGTCTTCCGAGAATTTTCAAAATATTCAACCCAATACGTCACTTA
AACAATAGAAAAAGTGACGTATTGGGTTGAATATTTCTAAAAATGTAGGA
AGACTCGCCAGTGGTCGGCCAGTGGTGCACACAGATCTGTAAAGCCCGAA
GGGCTAGATTTGGGGCTTTTATCAAAAAGTGAAGCCTAGGTTTGGAAGGA
TTTCCTACCAAAGTCACGTGACTAAAATATGCAATTTCACCGGTTTAAGA
GATGTGAAATAGCGTTTGCTGCCTACTTTTTTTGATCTCGCGCTCCGAAA
ACAATTAAAATGCTAGATCCTATCCATCGGCACGAAATTTAAAAAGTCAA
ATTTTTGCTTCACTTTTTTTTGCTGGAGAAAACTTAAAGTTGCCTATCTA
GCCCTTCGGGCTTTACAGATATCTGTGGTGGTGCATCCACATTCTTAGAT
TTTCCAGTGAAGAACTGTAAAGGTCCGTCTACATGGTGAAAACCCGTGAA
AAAAGAAAATTGACTAAGCCAGACCAAAAAAATTGATATTATAAAAATGA
ATATATGGTTATAAAAAAAGTTGATATTATATAAAAAAGTTGGTATTGTA
AAAAAAAAGTTGCTATTAAAAAAAAATTCTGATATTATAAAAATGAAAGT
TTGTATTATAATAAAAGTTGGTATTATAAAAAAAAGTTGATATTAAAAAT
GAAAGTTGTATTATAAAAAAAAGTTGATATTATACAAGTTGATAAAAAGT
GAAAGTTGGTATTATAAAAAAATGTTAGTATTATAAAAAGTTGATATTAT
AAAAAAAAGTTAGTATTAAAAAGCCTTTTGGCGCGCCATAAAATCTTCCA
CTGTTTCGAGTATAAAACTCTACTCTTAAGTGTAAGGTCTAAAAGCCTGG
AACTGTTTTTGGATCAACGTTGAGTTAACCAAAAAGATTGTTGTCGAATT
GGGACTTCTAGTGCAGTGTTCGGGCATTATATTTATCGTACTTATCAACA
TGGTCTGGCCTTTATGCCACAATATCCAGTGAAGGAGAGAAATACACCAT
CTCTGACATAAAATACAATTGACGCTCTCTAATTCGACGTTCTTCTATTC
GATACACTCTATTAATTATTGAATAGAACGTCACCATCAACAAGAAACTC
TCATAAACGAAACTCTATTTTTCGATATGCTTCCTTATCCGATGAAAATT
CTATTGCCCTTGAAAATTGATTTAGGGAGCGTCAAAATAAAAAGTTTTTC
GAATTCTCAGGGCCGAAAAAAGTTCGGATGCGCTCCACCACCAGTTCAGG
TTCACTCAAAACCACTGGTAAATTCTCAGATGGAACACGCCCAAGAGGGC
GTACAATAACATCCCGCCCAAAGAGTTGTGAAATCAGGTTGTGTGATCAG
GATAGTTTTGATGATGGAACTTTTGACAGTGGTATTTATGGTGCCTCGTC
TCCGAATGATGAAAGCGATTCTTCAATCAAAACAAAAACAAAATATGTGA
AAAGAGAGCTGGTAAAGTTAAAAGGAAGGTCGGTATTATCTTAAGTTTAT
ATTTCAGTTTTTAGATAACTTGAAGGAAAGGGGTTAGGAGTCGCCTACTC
TCGGGTACATAATAGCCGGGGGGGGGGGGCCGCTAATTAATTTTTCGAAA
ATTTTCCACCCAGGACATTCTTATTCCAACCCCCCCGCTTATTGATTTTT
TGGGAAATTTTTTTTGAAAGTTCCCTCTTTTGCCTTAATTCTGCTGTATC
AGCCTCCTTTTTGAACATTTTCCACCCAGGACATTTTTATTCCAACCCAA
CCCCCCCCCCGCTATTAAATTTTGAGATTTTTTCCAACCCCCCCTGATTA
TTCCAAACCCCCCGGCTATTAGGTACCCGAGAGTATGTCATTTTCCGCCA
GGAAATTTGGCGTACGTATGTCCACTGCGTCACATTCCCTGGTATTCAAA
TCAAGGACCAAACTAAGTACACTATGGACAACCAGGGTGTACTTGATCAT
CCCTAAATTTTTAAGAGTAATGAAAAAGAAATTAGGTATAAACTATGGAC
AATCTGGAGCAGCCTAATCTTGCAAAATCTAAGCTAAGTACAATCAAGGA
CAAACTTTGGATAGAGTTTTCATAATCAAGTACAATTCCAGTACATTCCA
ATTTATCCCTGATATCCAGGGATTTTTGCTCCCAAGGTGTACTTTGTTTT
GTTCTTGATTTGCCCTAAGGATAACAAAGGATTTCCTTGATTTGAATACC
AGGGTTGTAAGGCAGTATTCTACCTGGAAAGAAAACTTTCGAAATGATCT
ATATGGAAACATTTCTGAATCTTTCTTACATACAGTGCCAAAGATGACAC
TTCGATAAACGAACGCCTGACGGCAATCGAAGAATACATACAGACATATC
TTCCGGACGAATGTACAGTTAATCAAGGTATGGTGGAAAGCAACTTCTTA
ACTTGCATCTCTATAAATTCGAACGTCCCCTTTATAATCTGAACAAGTTT
GCTGGTCCCTTCAGTTAATAATGCCTTGTTAACCCTACTCCATATCTTGA
AATTTTCATCATTCGAACAAATGTGTGTTCCCTGTATTCGTATACCTCCA
ACAAAAAATTAATTCACTTCGCCGTTTTCTGCGTCTTTTCAGTTTTCCGT
GCCTAAAATCATAATAATAACGAGGAATAACATGGTCGTTCGGATGATTT
TTGGAATGAGAGCCCCTTGTTTCATTAAAAACATTTCAAAAAGTCCTAGC
TACGTTCAGGCTATTTTTGAAATGTTTTCAATATGAACCTTCGGGACTAT
TATTCCCAAATCACTTTCCAAATGTTAATACTAGTACTTATAGGGATCTT
AAAGTTATGGAGATTTAAGCCAATTGTACAACAGTATTTGTAGAAAATCA
AAACACAGCAATTTTTCTCTATATAGGTGTGATGAAGCAAAGGAAACCAC
GTCACCGATCTATCTCATCATCCTTGGCTGATCTTACAGCAGAAGATGTT
GCGAAAGAAGGGGGAATCCCTTTCCATGGGATGGTACTCACTTTCCCATC
CAAATTTCAAGGTAATTATGAATCATGCAATGGTAACGATTTTAATCTTT
TCTTAACTTATTTTAGTGTTTACAGATATAGATATATAGATACGAGCTCT
CCGAATGTATTCGGAATGGGTCCTACCCACGAAAGAGTAGGGATCACGGC
GCTGACAGACACTGCGACTTGACAGACGTGAGCTGCCAAGCCATGGCGAA
TACCATGACACTCGAACGACGCTGGGAGAGCGATGCTCATGCGATAGGCC
GAACCTTATGAGTACCACTGCACATCACAATGCCTGTCTAATCTACCCAT
ACTCTTTAGTGTTTACAGATACTATCTGGTGTATTTTTAGACCTTCGTTA
CCAAATAAATTAATAAATGATTTGGTTAATTAAGCTCTAAGCTCTCACAA
AGGCCTCCACGTTATAGGCACCTGAGAATAAATGCACTATAAGGGTGTAA
TTTTGATAGAGTGCACTACAAAAGTCTTTTTTTAGCTGGATACACTGTAA
GGATGTGTTTGGGCGTTTGGGGACTGCTGAATTGCAAGTCTGACAGTAAA
ACTCTGATGTATTTTACATTTTGACTCGCACTCATTTTGATTTATTTTGC
ACATTGTGTCGACATCTCAGGCTTATTTTTGGGTGGCTTCAGCAAAAAAC
GTTATGCAATAAAAACTATTACGGCTAATACGATCTAAAAATTATGGTAA
TTTTCAGTTTTTGAGACATGCCATAACTTAGCCGAGCAATGTAAGGGTAT
ATTTTCACTGTTCAAGAGCTACAATATAAAAGTCCGATTTTGAAAGCAAA
TATTTTTGGCGATACATGCCATCGATTAGAAATCGATTCACCCACCCCGG
AGGGGGGGGGCGGGTTAGTATTCTCTTTGGATTTAACTTTTAACTGGTGT
TGATTTGTATTTTAGATATCACAGTGAACGAAGCAACACAATTCTCAATT
TTCGATGACACGAACGTTGTGACGGAGGATTTG Coding sequence (CDS) from alignment at sc0000392_pilon:95136..103568- >XLOC_032662 ID=XLOC_032662|Name=XLOC_032662|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1806bp|location=Sequence derived from alignment at sc0000392_pilon:95136..103568- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTCTCCAACAAGAACAACATCAGTCATTTTCAGACCAAATAGATG
TCTTCTCCAACAAGAACAACATCAGTCATTTTCAGACCAAATAGGTCATC
AAGTAAAGAAAACCAAGGTCATCAAGTAAAGAAAACCAAGTTTCTTCAGC
TAATCGAAAGACTTGGTCACCCGAAGAACTGGCAACTTTTCAATATCCTG
AAACAGAAGGACAAAGTTTCTTCAGCTAATCGAAAGACTTGGTCACCCGA
AGAACTGGCAACTTTTCAATATCCTGAAACAGAAGGACAAAGTAGCCCAT
ATTCAGGAAGAAGTTTGACAATAGAGTATGGCTCGAGATCATCGTTGCTT
GAATCAAGAATACCGATTGCTATAGGTAGCCCATATTCAGGAAGAAGTTT
GACAATAGAGTATGGCTCGAGATCATCGTTGCTTGAATCAAGAATACCGA
TTGCTATAGGGCGCAGTAAGAAAGATTTGCGAGGCGCAGTAAGAAAGATT
TGCGAGCAAGTCGCGATTCAATACTGAGCACTGATTCATCCATAAGCACC
GCACCTAACACCAAGTCGCGATTCAATACTGAGCACTGATTCATCCATAA
GCACCGCACCTAACACTAACCAAAGATTTATACGCGATGATGGAGCAATA
ACCAAAGATTTATACGCGATGATGGAGCAAGGCCGAAAAAAGTTCGGATG
CGCTCCACCACCAGTTCAGGTTCACTCAAAACCACTGGTAAATTCTCAGA
TGGAACACGCCCAAGAGGGCGTACAATAACATCCCGCCCAAAGAGTTGTG
AAATCAGGTTGTGTGATCAGGATAGTTTTGATGATGGAACTTTTGACAGT
GGTATTTATGGTGCCTCGTCTCCGAATGATGAAAGCGATTCTTCAATCAA
AACAAAAACAAAATATGTGAAAAGAGAGCTGGTAAAGTTAAAAGGAAGGG
CCGAAAAAAGTTCGGATGCGCTCCACCACCAGTTCAGGTTCACTCAAAAC
CACTGGTAAATTCTCAGATGGAACACGCCCAAGAGGGCGTACAATAACAT
CCCGCCCAAAGAGTTGTGAAATCAGGTTGTGTGATCAGGATAGTTTTGAT
GATGGAACTTTTGACAGTGGTATTTATGGTGCCTCGTCTCCGAATGATGA
AAGCGATTCTTCAATCAAAACAAAAACAAAATATGTGAAAAGAGAGCTGG
TAAAGTTAAAAGGAAGTGCCAAAGATGACACTTCGATAAACGAACGCCTG
ACGGCAATCGAAGAATACATACAGACATATCTTCCGGACGAATGTACAGT
TAATCAAGTGCCAAAGATGACACTTCGATAAACGAACGCCTGACGGCAAT
CGAAGAATACATACAGACATATCTTCCGGACGAATGTACAGTTAATCAAG
GTGTGATGAAGCAAAGGAAACCACGTCACCGATCTATCTCATCATCCTTG
GCTGATCTTACAGCAGAAGATGTTGCGAAAGAAGGGGGAATCCCTTTCCA
TGGGATGGTACTCACTTTCCCATCCAAATTTCAAGGTGTGATGAAGCAAA
GGAAACCACGTCACCGATCTATCTCATCATCCTTGGCTGATCTTACAGCA
GAAGATGTTGCGAAAGAAGGGGGAATCCCTTTCCATGGGATGGTACTCAC
TTTCCCATCCAAATTTCAAGATATCACAGTGAACGAAGCAACACAATTCT
CAATTTTCGATGACACGAACGTTGTGACGGAGGATTTGATATCACAGTGA
ACGAAGCAACACAATTCTCAATTTTCGATGACACGAACGTTGTGACGGAG
GATTTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000392_pilon | genome | sc0000392_pilon:95136..103568 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 838-903:67 |
| Aaloc | 703-834:1106 |
| Aaloc | 610-699:1698 |
| Aaloc | 343-606:2772 |
| Aaloc | 310-339:4505 |
| Aaloc | 256-306:4928 |
| Aaloc | 232-252:5443 |
| Aaloc | 148-228:5918 |
| Aaloc | 73-144:6220 |
| Aaloc | 49-69:6496 |
| Aaloc | 1-45:8434 |
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