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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000392_pilon:104639..108908- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032661 ID=XLOC_032661|Name=XLOC_032661|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4270bp|location=Sequence derived from alignment at sc0000392_pilon:104639..108908- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAAAAGCATTCTCCTCAAGACTCAAGTGCAGCCAAATTTTCCAACAAA
ACATTCGAATGTAATGACTTCTCTTAATCTTTTAAAATCTGTGTATACTT
CTATTTTTCCTTATATATTTAAGACTTTTGTCAATCGACGAAGCTGACAT
TTTCAAGGAGCTTATTAATTCCTTTCATTTAGACTTTGATGTTTTCAATC
AGCTCCAAGGTGGATCAACGATCACTAACCATGTCGCTAAGCAACCACGA
TCGCCGGATGAGTGATCAATCATCCGGTAACAATACGCGAACCTCATCAC
TCAAACATCAACATAACAATCCAAGAGAACTGAAAGTTGAATATTCAGCC
GTCAGTCAAAAAGCAACCGTCAAAAGTACAGAAACGGTCAACGACACTCA
AGTCATTTACGTTTATTGTTCACCACGTTTGAAACATACGTTAATCTTTA
TATTTCGTTTTGTTTTGATTACGTACTGCGTTGCCGTTCCCGTATTTGTG
TATCTTCTACATCAAAAAAGTTCGGTTAATATTGCGAAAATTGAAAAGTT
TGAAACTGATTTTCAAAGACATTTACATAAAATTTCAGAAAATGATAAAC
TAAAGAATGAACAGTCTGCACCTTCATCTTCAACGTCGACTCGTAAAAGA
AGAAACGCTGAATTGGCTCAAAAGGAATTCGACAAGTCTTATAAACAACC
AGGAATGAAGGATCAAGATTTTCAAAAGAAGCTGAAAGAATTCAACAATA
CAGTTCAGAAATATAGACTGAAGTAATTTTTTTGAATTTAAGTGAATTTA
AGTGATCAAGATTTCAAATTAAAACGGTTATCATTAACTGTTACCATTTT
AAAATCAGTAAGGAAAATACCCCCTTTATAATGACCCCCCCTGAGATCAA
TGTTGTGAAGGTTTGAGCTGTTACAGAGAAGTTGGTTTGCTTTAAAACAT
AGATTTTTTAGGGGTACCCCTCCCCTTCTTAACTTTGCTGTCAATATATT
AACTGACAGATTGTAGTAATTTTAAACCTTAGTCACAATTATTTGGAATT
CTAGTCTTTATTGAGCCTTTATTAGCCAAATTCAATATTTTCTTCATTCA
GGCTTTCCGAATTGGAGCCAGCTGAGAAATGGTTACAAGAAATCTACATG
AAACATATCAGCACCAATTTAGATAGCACTGATTGTAACTGTAAAAAAGG
TAAAAGATATTATCACTTAACGAACTTTCAGGCACCTTTATATATTGGAC
CCTTATTTAACGCCGGTTTTTTATGCCGCTGCCTGATTTTAAGCTTAGAT
CTATTATAGCCGTAATTGAACAACGAAAGCTGAAAGCTATTCTCAATATC
ATTTGTGAGTTAGCTGTTAAAAGTTTTATTGAAAACAACTAAAATTCTTG
CAGTTTAGAAAATGGGTCGAAGAGTGGTTAATTTTCATCTTACTAGGAAA
AAGATTTAATGATAACACAATATTTTATCCCTTTATTACCACCAGGCAAT
AAATTAAGGCCTGCGCAGATGCATCCAACATTTGATCTAAGATTTCGAAT
TCTTTGTTGGACGAGATGTTGGATGAAAGTCACGAAAAGTTGGATGAAAA
GTCATTTGCGCAAAAATGTCAAAAAAATTTTGATCCAACATGATTACGCA
AATACCAAAACATGAAAGCAACATGAAAGTGGCGTCAATCTCATAAAAAT
GTTAGATGAAATGTTTGGTAGCGATCAAACTTTATACAATACGTTTTCCA
ACATTATTATTAAAAAGTTGCGATTTTATGACTTGCGCAAATGAACCCAA
CATTTCATCCAACAAATGTTGAATCCGATATTGGATGCATTTGCGCCGGC
CTTTAATGTCAACCAGGGTCGATAGTATATTACTTCTGGTCTGTCCAGCA
TCAGTTAATTATATCAACCATGCACGTTGAAATGAAAATATTGATTGTTC
ACAGCAAATTTTATCATGCATTAATCTCTGCTTTCACGTTTCAGAAACAG
ATTCCTCTGATGGAAAAGAATGTGCATCGAAAGGTACTGAGAATTATTTC
CTTATTTCCGAGAACATCCTGTTTCATTCATAAGGACCAGCTTATGCTGG
CGAAGATATTCTTCTTATGGAGCAAAAATCACCCAATAAATTTAAAATTG
TATATTGTCTCCTACAACCTATCCTTCATTCCAGGACATAATTGTAGAAA
CACATGCTTGTAAAATCTCCTTCCACCTAAAGGGGACAGAGTAAAAGTGT
ATTTTTGAGGGGTTGCTTCATTTTCCCCGATTGTAGTTTGTTTCATGGGC
ATATATTTTAACCTCATTTTATAGAATGCGATTGCTCGAAAGTAAAGCAA
GGACCACCAGGACCTCCTGGAAGACAAGGTGAACAAGGTGATCCTGGAAA
AATTGTAAAGGTAATGATTTTTGAAATTATTGAAATCATTCCTTTTCTGT
TTTGAAGTGACGCTTCTCATACGGTACCGAATATCTTACCACATCTACAT
CTTATTTTATGCAACGAGCTTCCCTATCCGTTTTACTGGGGACTACCTAT
AATGGAGCGTAACTTCAACGTTCGTAGCCGAAAAAGCCTAGAGAAGCTCA
GTGCTAAAGATGTCTGTATATATTTGACATTTAGTCAGACGGAATTGAAT
GACATTCAAATCACAAGTGTAATCGTCCGCCATACCACGTATTCAATTTT
TTTAAACAGGTGTCAAGTTTTTGTTTGAACTATTCTTCATTTTTACTGTT
TTTTAAATATTTCCTCAGGTACCGACGCTGAGAGGTCCTCAAGGTTTGCA
AGGTTCCAGAGGACCGAAAGGTGACCCTGGGGATATTGGTCCTCAGGGAA
AACCAGGTAAGAAGCCAACCTTCCTCAAATTAAGGAATTTATGATCATTG
TTGCCAAAACCATATCATATTCATTTTCCCATATTATGTCTTCCGAAAGG
TGAAACAAGAAAGATATGTTAAAATGTAACCTGAAGTTCCTGGCACTGTT
TACTTTGTTTCTAACGACCCTGCCGATGCACCGGACTGATTCGTGTGTGG
TCCGATATTTATATTGTCCGGTGGTAAAATGTTTTCCGTGTCCGGTGCTT
CCGTAACTCCGGTGTGTTGGTTGCTCCTGTTCAGCCTTTACCTTTAAGGC
TGGTCTCCACTTTCGCGTGAAATAGGCGACAGTTTTTGCGAGAATAAAAG
ATTACGTTATGAAAAAGTTTCGCGCGAACAAAAAAAAAGTTGAAGGATGT
TCTACTTTTTTCATCCGTTACGTCAATTTCGACCAATAGAATTGCTTCAT
TTTTGAACCGACCAATGGCCTTACAAAAACGTCAAAAAGTTTTCACTCGT
GTCGCGCGAAAGTGGAGATCGGCCTTTATACTACTCGTTAATTTATGCTT
CAATGTATGTTCATAGGTGCTGATGCAAGCTGTGATTCCAATAAAAACAA
CAAAGATTTGAAAACAACTTACATTCGTTGGGGGAGTAAAGAATGTGGAA
AAGATGCCAACAAGATATACTCAGGTTTGTTGACAAAAACCTTCCTTTTA
AAAGATATTCCATATTAATATTGTTGTATACGTTTTTAATTAATTGTATC
TTATCGGGGAAAAAAGACCAGGTTTGATTACATTATCGGCCCTTTTTACG
CCGGCCCTTATTGACGTTATTTTTGGGCTCGTGGCGTAATAAGGGCCGGT
GTTAAATTAGGGCCGGCGTAAAAAGGGCCGATAAGGTAGTCGGATGAAAA
CTTGGACGGGGAAAATTCGTCAATTAGAGACATTTTCGTCACTTTCATCC
GCCATCAAATTCTGCTTTTGATACTTCTGATTACTTTTGTACAGTTGTTT
AACTTTGTCAAGACCAACTCCGAAGTTTGACTTGGCCGACCAAACGGCCT
TAATTTTTATGCAGTTAAAGAGTCCCTAAGGCGCCAGGGAAGTCAACGAA
GGCTCTAATAAGCATAGAAAGCATTAGCATAGAAAAAGTGAATTTTAATT
AAGAAAGAGGCATCATTTGGAGAGGTAAACACACGTATGATTTCATTCAC
TAAAATGTTTCGTATACTGAGATAGTCAATTAATCTTTAGCGAGTTAAAC
CATAGTGTTTTTTTACAAGATTCTGACATCGTGGTAAAAAACTAAAAATT
GTTTATATCGACGAAATTTTTAAATTTTTAAATTTTTAAAACGTTTTATT
CATAGGATACATGGGTGGCGCTTCAAACCGAGCCAGTGGCGGTGGTTCCA
ACTATCTGTGTCTCCCAGAA Coding sequence (CDS) from alignment at sc0000392_pilon:104639..108908- >XLOC_032661 ID=XLOC_032661|Name=XLOC_032661|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2256bp|location=Sequence derived from alignment at sc0000392_pilon:104639..108908- (Clytia hemisphaerica_ch_hm2_pilon)
TTTAAAAGCATTCTCCTCAAGACTCAAGTGCAGCCAAATTTTCCAACAAA
ACATTCGAATTTTAAAAGCATTCTCCTCAAGACTCAAGTGCAGCCAAATT
TTCCAACAAAACATTCGAATACTTTGATGTTTTCAATCAGCTCCAAGGTG
GATCAACGATCACTAACCATGTCGCTAAGCAACCACGATCGCCGGATGAG
TGATCAATCATCCGGTAACAATACGCGAACCTCATCACTCAAACATCAAC
ATAACAATCCAAGAGAACTGAAAGTTGAATATTCAGCCGTCAGTCAAAAA
GCAACCGTCAAAAGTACAGAAACGGTCAACGACACTCAAGTCATTTACGT
TTATTGTTCACCACGTTTGAAACATACGTTAATCTTTATATTTCGTTTTG
TTTTGATTACGTACTGCGTTGCCGTTCCCGTATTTGTGTATCTTCTACAT
CAAAAAAGTTCGGTTAATATTGCGAAAATTGAAAAGTTTGAAACTGATTT
TCAAAGACATTTACATAAAATTTCAGAAAATGATAAACTAAAGAATGAAC
AGTCTGCACCTTCATCTTCAACGTCGACTCGTAAAAGAAGAAACGCTGAA
TTGGCTCAAAAGGAATTCGACAAGTCTTATAAACAACCAGGAATGAAGGA
TCAAGATTTTCAAAAGAAGCTGAAAGAATTCAACAATACAGTTCAGAAAT
ATAGACTGAAACTTTGATGTTTTCAATCAGCTCCAAGGTGGATCAACGAT
CACTAACCATGTCGCTAAGCAACCACGATCGCCGGATGAGTGATCAATCA
TCCGGTAACAATACGCGAACCTCATCACTCAAACATCAACATAACAATCC
AAGAGAACTGAAAGTTGAATATTCAGCCGTCAGTCAAAAAGCAACCGTCA
AAAGTACAGAAACGGTCAACGACACTCAAGTCATTTACGTTTATTGTTCA
CCACGTTTGAAACATACGTTAATCTTTATATTTCGTTTTGTTTTGATTAC
GTACTGCGTTGCCGTTCCCGTATTTGTGTATCTTCTACATCAAAAAAGTT
CGGTTAATATTGCGAAAATTGAAAAGTTTGAAACTGATTTTCAAAGACAT
TTACATAAAATTTCAGAAAATGATAAACTAAAGAATGAACAGTCTGCACC
TTCATCTTCAACGTCGACTCGTAAAAGAAGAAACGCTGAATTGGCTCAAA
AGGAATTCGACAAGTCTTATAAACAACCAGGAATGAAGGATCAAGATTTT
CAAAAGAAGCTGAAAGAATTCAACAATACAGTTCAGAAATATAGACTGAA
GCTTTCCGAATTGGAGCCAGCTGAGAAATGGTTACAAGAAATCTACATGA
AACATATCAGCACCAATTTAGATAGCACTGATTGTAACTGTAAAAAAGGC
TTTCCGAATTGGAGCCAGCTGAGAAATGGTTACAAGAAATCTACATGAAA
CATATCAGCACCAATTTAGATAGCACTGATTGTAACTGTAAAAAAGATTC
CTCTGATGGAAAAGAATGTGCATCGAAAGATTCCTCTGATGGAAAAGAAT
GTGCATCGAAAGAATGCGATTGCTCGAAAGTAAAGCAAGGACCACCAGGA
CCTCCTGGAAGACAAGGTGAACAAGGTGATCCTGGAAAAATTGTAAAGAA
TGCGATTGCTCGAAAGTAAAGCAAGGACCACCAGGACCTCCTGGAAGACA
AGGTGAACAAGGTGATCCTGGAAAAATTGTAAAGGTACCGACGCTGAGAG
GTCCTCAAGGTTTGCAAGGTTCCAGAGGACCGAAAGGTGACCCTGGGGAT
ATTGGTCCTCAGGGAAAACCAGGTACCGACGCTGAGAGGTCCTCAAGGTT
TGCAAGGTTCCAGAGGACCGAAAGGTGACCCTGGGGATATTGGTCCTCAG
GGAAAACCAGGTGCTGATGCAAGCTGTGATTCCAATAAAAACAACAAAGA
TTTGAAAACAACTTACATTCGTTGGGGGAGTAAAGAATGTGGAAAAGATG
CCAACAAGATATACTCAGGTGCTGATGCAAGCTGTGATTCCAATAAAAAC
AACAAAGATTTGAAAACAACTTACATTCGTTGGGGGAGTAAAGAATGTGG
AAAAGATGCCAACAAGATATACTCAGGATACATGGGTGGCGCTTCAAACC
GAGCCAGTGGCGGTGGTTCCAACTATCTGTGTCTCCCAGAAGATACATGG
GTGGCGCTTCAAACCGAGCCAGTGGCGGTGGTTCCAACTATCTGTGTCTC
CCAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000392_pilon | genome | sc0000392_pilon:104639..108908 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1066-1128:64 |
| Aaloc | 958-1062:853 |
| Aaloc | 868-954:1503 |
| Aaloc | 784-867:1945 |
| Aaloc | 751-780:2269 |
| Aaloc | 652-747:3169 |
| Aaloc | 61-648:4089 |
| Aaloc | 1-60:4271 |
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