|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000392_pilon:119471..122689- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032660 ID=XLOC_032660|Name=XLOC_032660|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3219bp|location=Sequence derived from alignment at sc0000392_pilon:119471..122689- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGATTTTTACTTTGGTATTTCGTTCTTGTTGTTTTGGTCATCAAACA
TGATATTAATTGTAAGTATTTTCAAAATTATAAAACGTTCTCATTCTACA
AGTCATTTTCTAGATGAATTCTTTGATGCTCCATAGCCGTTCAATGTACT
AATAAGCCTTCTAGTTTTTGTAAATAACTATCGATCGATAACTTTCCTTA
GACCCCCCCCCCTAATACCGTGCCGCTGCCTCAAGCCCTACCTCGGGGGG
GGGGGGGCGTACGGGGTTTGCGATTTCCGAAATACCGAATAATTTAGCCA
AAATTTCCGAAATTCCGTAAAAAAATACTTGCAATTCCGATACCGAATTT
TTCCTCGTTTTGACTAATTTTCCATTAAATTTGATTTTTCATGTATGAAT
TCCGAAAAAGGGGGATAAAAACTTTATAATACCGAAATTTCGAAGCAAAA
ATTCATGGATTTCCGATACTGAAAGAATTTCAGAATTCCGAAATACCGAA
GGAATTTTCCCCGATTTCCGAAATTCCGAAGAAAAAAGGGTCGATTTCCG
CAATTCCGAAATACCGTACGCCCCCCACTACCTCCTAGGGAATTTTTATC
CTCCTCTCTTTCCTTATCTTGTTACCAATCTTACGATTATTCGGGACTCT
CTCTCTCATTAAATTATTTAATCAATACTTAATAGGCAAACATCATCGAT
CAAGACAGTCAAAGAAATCAATCATTCCCAAATCACCAAAAATCACTCAC
CAACAACAATCATCACACTTTTCACATAATCTTCCATGGAAAGAGATCTC
TAAAAAATCGTTGATCGATTCAAATCCTTCAGAGGATACCGAAACAATGC
AAAAACAAAAGAGAGGTATTGTATTTTTTCTCGCTTTATTAATTTTGTAT
TACCTTTCCTTTCAATAGATCTTTATCCGTAGATATTATATTCTTTTGCA
CACTAAAAAGCCAGTTTTGAAGTCGACTTTTCTGTCATGTCTGGTCATGT
TTGTCTCTTTTTTACCTTAGATTGTCGAACGTTTGTATATAAACATTCGA
ATCCCGTAGTTCATCAACAGAATAGAATAGAAAGGTAGAATAGTCGGTTC
AAAATAAGCTAGAAACGATTCCGTTATTTTAAGAAGCCCAGTTCATTAAA
GTAGTTGGAGATTAGTGCTTTTGTCCCTATCTTCAAGTTTTAATCTCTAG
CCAAGAGCATTTTTAGGGAGATTGAAATGCTCAAATATTTGAACTATATT
TTCTTTATGTTTCAGGTTTTCTTGCGAATCTGGCTAATTTACTAAACGAT
GCTGAGTCAATCTCATCTCATAAGGAAACTGAGACAAAAGTACCAAGTAT
CGATGAGGCTCACGAAAAGAAGGCTGTCGTAGAAAGCCACGAAGAAACCC
CAATATCAAAACCTAAACACGAAGAAAATAGCGATAAGAAAGATGTGATC
GATCTATCGGCACTTAAAGACTCTATCAAAGCAGATTCTTCTGATTTTGC
ACCAATCTTTGCCATGTATCATGGTAAAGTTGTTGAGCTTGGTAAATTAC
CAGAAAGCTCTTTTAAGAAGAGTCATCAAACTTCAGATGTTACTTTGCCA
GAACATCATGCGAAAGACGTCACAGCTTCAAAACGTGTCTTGGATGAGAC
GACAAGTCACAAAATGGACGTCACTCCCGTCAAACGTGAATACCATTCAT
CGACTCCAGATCAACTGAAAACTTACCTCAATACCATGGCTGGTGGTTCA
GATCAACAGAACAGCATTACCAAAGATACAATATCAATACCCAACTTAGA
ATCTGGAATTAAGGGAGATTTAATCAACCATGTCAAAGGAGTCGTGTTAG
ATGATGGTAAAGTCGTATCTGTCAGCAATAATCATTTATTTGATAACAAT
AATGATGTCTCTAAAGTACAATCAGACGCAGTGCAACAAGATGTCCAACA
GAAGTTCATGGTTAATAAAGAAGGCAATGTGGAACCATTGGTTAAAGAAA
AAGTGGAAACTGCCGATGCTGTAACCAGGGATAACTTAGGGAATGGTCAG
AAAACTGTGACACTGACTGTTGATGTTTTGAAGCAACTATTGAAGAAAAC
AGGAGATTCAAAAGTTTCTTTGGCACAATTGCTGAATAAACCAAACGAAG
CTGAGCAAAGAAGCAATACTCAAGAAGATGAAGACCCAGGTCCGTTATCG
TGTTTTGATTTCTAGTAGAAAACGAAATTAAACATTCTTATTATAAGATA
CATCATAAGATAACTTAGCCAAAATTTCGTCCCGTTGAGAAGAAACATAC
CCTATAATTTTACCCCCACTGCGAAATTGACTTTTTATTCTCATTTGAAG
TTCAATGGAAAAGAAAACCCTCGAAACCATCCCCACTGGGTTTTTTAAAG
CTTGGAATTGTAACAATAAAGTTTCTTTCCACATTCGGATTTCGGTAGAA
ATTTTCATCCCAACTGTGGGAAAAAGTTCCACCAGCACTGAGAAAAGGTG
TAAAATGTTTTTACAATCTCCGTCATGTTTTGGATTTATGAAACGCCCCT
TATTTACTCAAAATTTAATTGATGTAATCAATGTTTAGCGTTAGCGTTTT
TTAATAAATCTTATCATTACTTTTCCTTTCAGGCACCATTGAAGATTTTG
CTGCTGGTGGATTGAAAGCACACAACGAATACCGTAGCAAGCATCACGAT
GACAATGTGATCTGGTCAGACTCACTAGCTGCGAAAGCACAAAAGCTAGC
TGAAGCTTTAGCTGATAAAAAATCATTAGAAATTGCCAAAGATCTTGAAA
AAGAAGGGATGGGAGAAAACGTAGCCAAGGTTTGGGCGACTTTTAAAAAT
GCTGGTGAAGCAGCAACTAAAATGTGGTATAGCCAGAGTGAAAACTACCA
TTTTGATGATCCGCATTTAGACGAAAATACAGGGCAATTTGCACAGGTTG
TTTGGAAATCAACCAAAGAACTTGGCATGGGTGTAGCTAAAAGTATTGAT
GATGTGAACAATAAATATGTTTATGTAACAGCTTTGTATAGTCCTCCAGG
AAATATTGAAGCTGTGTTGAGAGACAATGTTTTACCTACTGGTAATAACA
CACAAGATGTTTATTCAACTTTCTTTAAAAGGACTGGTGTTATAAACCAT
GAGCCTGCTGTTGTTCGAAGGTCAAGGCTACCAAAGAGTAAGAAAGCGAA
AAAGATTGTTGCACCTTGA Coding sequence (CDS) from alignment at sc0000392_pilon:119471..122689- >XLOC_032660 ID=XLOC_032660|Name=XLOC_032660|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3504bp|location=Sequence derived from alignment at sc0000392_pilon:119471..122689- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGATTTTTACTTTGGTATTTCGTTCTTGTTGTTTTGGTCATCAAACA
TGATATTAATTATGAGATTTTTACTTTGGTATTTCGTTCTTGTTGTTTTG
GTCATCAAACATGATATTAATTGCAAACATCATCGATCAAGACAGTCAAA
GAAATCAATCATTCCCAAATCACCAAAAATCACTCACCAACAACAATCAT
CACACTTTTCACATAATCTTCCATGGAAAGAGATCTCTAAAAAATCGTTG
ATCGATTCAAATCCTTCAGAGGATACCGAAACAATGCAAAAACAAAAGAG
AGGCAAACATCATCGATCAAGACAGTCAAAGAAATCAATCATTCCCAAAT
CACCAAAAATCACTCACCAACAACAATCATCACACTTTTCACATAATCTT
CCATGGAAAGAGATCTCTAAAAAATCGTTGATCGATTCAAATCCTTCAGA
GGATACCGAAACAATGCAAAAACAAAAGAGAGGTTTTCTTGCGAATCTGG
CTAATTTACTAAACGATGCTGAGTCAATCTCATCTCATAAGGAAACTGAG
ACAAAAGTACCAAGTATCGATGAGGCTCACGAAAAGAAGGCTGTCGTAGA
AAGCCACGAAGAAACCCCAATATCAAAACCTAAACACGAAGAAAATAGCG
ATAAGAAAGATGTGATCGATCTATCGGCACTTAAAGACTCTATCAAAGCA
GATTCTTCTGATTTTGCACCAATCTTTGCCATGTATCATGGTAAAGTTGT
TGAGCTTGGTAAATTACCAGAAAGCTCTTTTAAGAAGAGTCATCAAACTT
CAGATGTTACTTTGCCAGAACATCATGCGAAAGACGTCACAGCTTCAAAA
CGTGTCTTGGATGAGACGACAAGTCACAAAATGGACGTCACTCCCGTCAA
ACGTGAATACCATTCATCGACTCCAGATCAACTGAAAACTTACCTCAATA
CCATGGCTGGTGGTTCAGATCAACAGAACAGCATTACCAAAGATACAATA
TCAATACCCAACTTAGAATCTGGAATTAAGGGAGATTTAATCAACCATGT
CAAAGGAGTCGTGTTAGATGATGGTAAAGTCGTATCTGTCAGCAATAATC
ATTTATTTGATAACAATAATGATGTCTCTAAAGTACAATCAGACGCAGTG
CAACAAGATGTCCAACAGAAGTTCATGGTTAATAAAGAAGGCAATGTGGA
ACCATTGGTTAAAGAAAAAGTGGAAACTGCCGATGCTGTAACCAGGGATA
ACTTAGGGAATGGTCAGAAAACTGTGACACTGACTGTTGATGTTTTGAAG
CAACTATTGAAGAAAACAGGAGATTCAAAAGTTTCTTTGGCACAATTGCT
GAATAAACCAAACGAAGCTGAGCAAAGAAGCAATACTCAAGAAGATGAAG
ACCCAGGTTTTCTTGCGAATCTGGCTAATTTACTAAACGATGCTGAGTCA
ATCTCATCTCATAAGGAAACTGAGACAAAAGTACCAAGTATCGATGAGGC
TCACGAAAAGAAGGCTGTCGTAGAAAGCCACGAAGAAACCCCAATATCAA
AACCTAAACACGAAGAAAATAGCGATAAGAAAGATGTGATCGATCTATCG
GCACTTAAAGACTCTATCAAAGCAGATTCTTCTGATTTTGCACCAATCTT
TGCCATGTATCATGGTAAAGTTGTTGAGCTTGGTAAATTACCAGAAAGCT
CTTTTAAGAAGAGTCATCAAACTTCAGATGTTACTTTGCCAGAACATCAT
GCGAAAGACGTCACAGCTTCAAAACGTGTCTTGGATGAGACGACAAGTCA
CAAAATGGACGTCACTCCCGTCAAACGTGAATACCATTCATCGACTCCAG
ATCAACTGAAAACTTACCTCAATACCATGGCTGGTGGTTCAGATCAACAG
AACAGCATTACCAAAGATACAATATCAATACCCAACTTAGAATCTGGAAT
TAAGGGAGATTTAATCAACCATGTCAAAGGAGTCGTGTTAGATGATGGTA
AAGTCGTATCTGTCAGCAATAATCATTTATTTGATAACAATAATGATGTC
TCTAAAGTACAATCAGACGCAGTGCAACAAGATGTCCAACAGAAGTTCAT
GGTTAATAAAGAAGGCAATGTGGAACCATTGGTTAAAGAAAAAGTGGAAA
CTGCCGATGCTGTAACCAGGGATAACTTAGGGAATGGTCAGAAAACTGTG
ACACTGACTGTTGATGTTTTGAAGCAACTATTGAAGAAAACAGGAGATTC
AAAAGTTTCTTTGGCACAATTGCTGAATAAACCAAACGAAGCTGAGCAAA
GAAGCAATACTCAAGAAGATGAAGACCCAGGCACCATTGAAGATTTTGCT
GCTGGTGGATTGAAAGCACACAACGAATACCGTAGCAAGCATCACGATGA
CAATGTGATCTGGTCAGACTCACTAGCTGCGAAAGCACAAAAGCTAGCTG
AAGCTTTAGCTGATAAAAAATCATTAGAAATTGCCAAAGATCTTGAAAAA
GAAGGGATGGGAGAAAACGTAGCCAAGGTTTGGGCGACTTTTAAAAATGC
TGGTGAAGCAGCAACTAAAATGTGGTATAGCCAGAGTGAAAACTACCATT
TTGATGATCCGCATTTAGACGAAAATACAGGGCAATTTGCACAGGTTGTT
TGGAAATCAACCAAAGAACTTGGCATGGGTGTAGCTAAAAGTATTGATGA
TGTGAACAATAAATATGTTTATGTAACAGCTTTGTATAGTCCTCCAGGAA
ATATTGAAGCTGTGTTGAGAGACAATGTTTTACCTACTGGTAATAACACA
CAAGATGTTTATTCAACTTTCTTTAAAAGGACTGGTGTTATAAACCATGA
GCCTGCTGTTGTTCGAAGGTCAAGGCTACCAAAGAGTAAGAAAGCGAAAA
AGATTGTTGCACCTTGAGCACCATTGAAGATTTTGCTGCTGGTGGATTGA
AAGCACACAACGAATACCGTAGCAAGCATCACGATGACAATGTGATCTGG
TCAGACTCACTAGCTGCGAAAGCACAAAAGCTAGCTGAAGCTTTAGCTGA
TAAAAAATCATTAGAAATTGCCAAAGATCTTGAAAAAGAAGGGATGGGAG
AAAACGTAGCCAAGGTTTGGGCGACTTTTAAAAATGCTGGTGAAGCAGCA
ACTAAAATGTGGTATAGCCAGAGTGAAAACTACCATTTTGATGATCCGCA
TTTAGACGAAAATACAGGGCAATTTGCACAGGTTGTTTGGAAATCAACCA
AAGAACTTGGCATGGGTGTAGCTAAAAGTATTGATGATGTGAACAATAAA
TATGTTTATGTAACAGCTTTGTATAGTCCTCCAGGAAATATTGAAGCTGT
GTTGAGAGACAATGTTTTACCTACTGGTAATAACACACAAGATGTTTATT
CAACTTTCTTTAAAAGGACTGGTGTTATAAACCATGAGCCTGCTGTTGTT
CGAAGGTCAAGGCTACCAAAGAGTAAGAAAGCGAAAAAGATTGTTGCACC
TTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000392_pilon | genome | sc0000392_pilon:119471..122689 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1168-1752:586 |
| Aaloc | 244-1164:1953 |
| Aaloc | 64-240:2533 |
| Aaloc | 1-60:3220 |
|
