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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000392_pilon:123629..126234- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_032659 ID=XLOC_032659|Name=XLOC_032659|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2606bp|location=Sequence derived from alignment at sc0000392_pilon:123629..126234- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGTTATAAATTGTTGGGGTGTTGGCTCAGTCCGTCAACATTCTGG
TTTCTGTTGTGGAGACAAATACTACGCACCGATTGGACGATGTTTGGTCA
CGTGGGACATGAAAATCAAAGAAAGCGAACCTGTTCGACAAATACACAAT
GACTTAATCACTGTCATGATACCGAATAAACTAGGTAAGAATTTTCACTA
CACTCAGACTCACAGCTATACTTTAATATCTTGAGAAAATATGGTATTGA
CGAAGTGTGACTTATGGTCAGATTGTCCAAAATTTACACCCTCCGGGGGA
AATTATTTGATCAAAAATTAACTCATATTGGAATTTCTTGAATTAATGAT
TATGATGAAATATACACGCTCGAAAATTGTTAAAACCTTTTTTAATATGA
TTTATTTTCTATGTCAGATGAAATTCTAACTGTTGGTTATGGTGGTCAAG
TGAAGCTCTGGTCAAAAGACTGGCAATTGCTAACATCGTTTCAATCAGAC
ACTAAGAATGTGATCTACGGTTCCTGGTCCCCTGATGGAAGCGAATTCTC
ATTCAGTTCTAAAGGACCCAAACAAATGTTGGCTGTTTACAAGAAAGATA
CTCTCATCGAACAATATACTCAAAACGTCAAGATTACTCCCAAATGGATT
TACCAAGCTCCACAGACAAGTAAAAAAGAGGTAAAAGGTCGAAAATCCTA
TGACATGTTCAATGCATCTATCCACAAAGATAATCTAGAGATTCTAGCTG
CTTACTGCACGAGAGAGGGTTGTGAGTTATTTCTCATCTCTCAAAGTGGC
GATACCATAAAACGCGGACCAATTTCGCCTATAGGGGACCCCAAAAACGA
TATGCAGTGCGTCTCCGAGATCAATAACGATAGAATCGCTATAGGCGTAC
AGCATGGGATATTTGGCTTTTACCACATAGACACTTTGGATTTGTTGACA
GTCATCCAAGCTACGGGATCACCAAGGATTTGCATGTGGGATAGTGACTT
GTTTGTCACCACAGCTTATGTGTCTGGAATCATATCCTTTTGGAGTCAAG
ATGGCCAATTATTGAAAGAAATTAAGGGTAGGTAATTAAGGATAATTTAT
TTTCAGACCAAGTCCCATTGTAAGAAGTTAATTTTCATTACTGAAACGTT
TTCCGAAAAATCTAGTATTTTGAATTTAGCCCTTGATAAGCATTTGCTTC
GTTGAAAGAAATTCTAGATCGACGTCACTTTAATACTTTGTGCTAAGAAA
ATATTGTAGGTCTTTATAGTCTTTCTCGCTGGAAGCCGGGTTTGCGTTAC
TGAGAAAGTCTAGCGAAGTTATTTCAGCTTCGTATTGGGTTTGACTGATT
TTTTTCTTTCTTTTCATATTCATCCTATAGGAGGACCTATTGGATCTATC
GTACAAATGAACAGAGTCGAACAATTTACATATTACATTTGCGGTATCAT
GTCTCTACACAAGGTATCTTTCGATTATGAAAATAGTTGCATAGCAAGCA
TAGATGATATTTCTTATTTAACATTGACTGGTTGTGGTTTAGATATAAGT
AATACCGGTCTAGTGGCTTCTGGTGATTTTACTGGGAATATTTATCTATG
GCAAACACCTTCAAGAAAATCTGTTTGTTCCTTCAATGTTACATATTCAA
TTCGCTGTTTGCTTTGGGTTGGCGATTTTCTACTGATTGGTTGTCTCAAC
TCTGAAGTAAGTTGTTGGAAATATAATTCAAAGGTCACCCCGGAGAAAGA
AGTGAACAGTGTTCGGAATCTGTATACTGTTATTGGTGACCCAGTTGCCT
TGGCAACGAATTCGGATGAATCCAAATTAGCTTTGGGAACTACAGCAGGA
TATTTGTATGTTTTCGATTTGAAGAAAAATGAAGAATCTTTGGATATTGA
AGTTTTTCATTGTAGCCAGATTCACAAACCCAAGGTGAATAATGATGGCT
CCTTCTTGAACATGGAGATTTGGAATTTGAGATGGAGTATTGACGACCGT
TACATAGCAACGACTTCTGAAGATCAAACTGCCATCGTTTCAGATTCTTT
AACAGGTAATAAAAATTTTCATAAATATCCTTCTCTCTCTGACACTTGCT
TTTTTTATAAGCGTACGAAAAATTGAAAACAGGCTCGGAGTTTGACACTA
AACCCTTAGTAAATACTTTTAAAAATTATTCTAAATGCTTGAAAACTTGG
ATATAAAACCTTTCTTTGCAAAAATATCTGGTGTATATTTCGCCATTTCA
CCATAGGTGAAGTTTTAAAAACATTGACTGGTCACACCACAGCCGTAACT
GACCTCAGTTGGAAACTTTTAGCCTCTGGAAAACACGTTCTTGCAACATG
TGCTGACGACCGAACAGTCCGCGTATACGATGGATTGACATTTGAACTCA
TCACTGTTCTTAAAACAGAACTTGTATATGGTTGGTATACCCTAACTTAT
ATGGAAATCAATGAAAAAAATGATCGATTATTTGTAACTACGCAAAATGG
TTACTTATTGTCATGGGACTTGAATTCTTTTGAATTGATTTACTGTGAGA
AATTGCATGCTGGATCTATTGAAGGAATCGCACTTTCGAAGGATGGACAA
TCTCTG Coding sequence (CDS) from alignment at sc0000392_pilon:123629..126234- >XLOC_032659 ID=XLOC_032659|Name=XLOC_032659|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3738bp|location=Sequence derived from alignment at sc0000392_pilon:123629..126234- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGTTATAAATTGTTGGGGTGTTGGCTCAGTCCGTCAACATTCTGG
TTTCTGTTGTGGAGACAAATACTACGCACCGATTGGACGATGTTTGGTCA
CGTGGGACATGAAAATCAAAGAAAGCGAACCTGTTCGACAAATACACAAT
GACTTAATCACTGTCATGATACCGAATAAACTAGATGAATGTTATAAATT
GTTGGGGTGTTGGCTCAGTCCGTCAACATTCTGGTTTCTGTTGTGGAGAC
AAATACTACGCACCGATTGGACGATGTTTGGTCACGTGGGACATGAAAAT
CAAAGAAAGCGAACCTGTTCGACAAATACACAATGACTTAATCACTGTCA
TGATACCGAATAAACTAGATGAAATTCTAACTGTTGGTTATGGTGGTCAA
GTGAAGCTCTGGTCAAAAGACTGGCAATTGCTAACATCGTTTCAATCAGA
CACTAAGAATGTGATCTACGGTTCCTGGTCCCCTGATGGAAGCGAATTCT
CATTCAGTTCTAAAGGACCCAAACAAATGTTGGCTGTTTACAAGAAAGAT
ACTCTCATCGAACAATATACTCAAAACGTCAAGATTACTCCCAAATGGAT
TTACCAAGCTCCACAGACAAGTAAAAAAGAGGTAAAAGGTCGAAAATCCT
ATGACATGTTCAATGCATCTATCCACAAAGATAATCTAGAGATTCTAGCT
GCTTACTGCACGAGAGAGGGTTGTGAGTTATTTCTCATCTCTCAAAGTGG
CGATACCATAAAACGCGGACCAATTTCGCCTATAGGGGACCCCAAAAACG
ATATGCAGTGCGTCTCCGAGATCAATAACGATAGAATCGCTATAGGCGTA
CAGCATGGGATATTTGGCTTTTACCACATAGACACTTTGGATTTGTTGAC
AGTCATCCAAGCTACGGGATCACCAAGGATTTGCATGTGGGATAGTGACT
TGTTTGTCACCACAGCTTATGTGTCTGGAATCATATCCTTTTGGAGTCAA
GATGGCCAATTATTGAAAGAAATTAAGGATGAAATTCTAACTGTTGGTTA
TGGTGGTCAAGTGAAGCTCTGGTCAAAAGACTGGCAATTGCTAACATCGT
TTCAATCAGACACTAAGAATGTGATCTACGGTTCCTGGTCCCCTGATGGA
AGCGAATTCTCATTCAGTTCTAAAGGACCCAAACAAATGTTGGCTGTTTA
CAAGAAAGATACTCTCATCGAACAATATACTCAAAACGTCAAGATTACTC
CCAAATGGATTTACCAAGCTCCACAGACAAGTAAAAAAGAGGTAAAAGGT
CGAAAATCCTATGACATGTTCAATGCATCTATCCACAAAGATAATCTAGA
GATTCTAGCTGCTTACTGCACGAGAGAGGGTTGTGAGTTATTTCTCATCT
CTCAAAGTGGCGATACCATAAAACGCGGACCAATTTCGCCTATAGGGGAC
CCCAAAAACGATATGCAGTGCGTCTCCGAGATCAATAACGATAGAATCGC
TATAGGCGTACAGCATGGGATATTTGGCTTTTACCACATAGACACTTTGG
ATTTGTTGACAGTCATCCAAGCTACGGGATCACCAAGGATTTGCATGTGG
GATAGTGACTTGTTTGTCACCACAGCTTATGTGTCTGGAATCATATCCTT
TTGGAGTCAAGATGGCCAATTATTGAAAGAAATTAAGGGAGGACCTATTG
GATCTATCGTACAAATGAACAGAGTCGAACAATTTACATATTACATTTGC
GGTATCATGTCTCTACACAAGGTATCTTTCGATTATGAAAATAGTTGCAT
AGCAAGCATAGATGATATTTCTTATTTAACATTGACTGGTTGTGGTTTAG
ATATAAGTAATACCGGTCTAGTGGCTTCTGGTGATTTTACTGGGAATATT
TATCTATGGCAAACACCTTCAAGAAAATCTGTTTGTTCCTTCAATGTTAC
ATATTCAATTCGCTGTTTGCTTTGGGTTGGCGATTTTCTACTGATTGGTT
GTCTCAACTCTGAAGTAAGTTGTTGGAAATATAATTCAAAGGTCACCCCG
GAGAAAGAAGTGAACAGTGTTCGGAATCTGTATACTGTTATTGGTGACCC
AGTTGCCTTGGCAACGAATTCGGATGAATCCAAATTAGCTTTGGGAACTA
CAGCAGGATATTTGTATGTTTTCGATTTGAAGAAAAATGAAGAATCTTTG
GATATTGAAGTTTTTCATTGTAGCCAGATTCACAAACCCAAGGTGAATAA
TGATGGCTCCTTCTTGAACATGGAGATTTGGAATTTGAGATGGAGTATTG
ACGACCGTTACATAGCAACGACTTCTGAAGATCAAACTGCCATCGTTTCA
GATTCTTTAACAGGAGGACCTATTGGATCTATCGTACAAATGAACAGAGT
CGAACAATTTACATATTACATTTGCGGTATCATGTCTCTACACAAGGTAT
CTTTCGATTATGAAAATAGTTGCATAGCAAGCATAGATGATATTTCTTAT
TTAACATTGACTGGTTGTGGTTTAGATATAAGTAATACCGGTCTAGTGGC
TTCTGGTGATTTTACTGGGAATATTTATCTATGGCAAACACCTTCAAGAA
AATCTGTTTGTTCCTTCAATGTTACATATTCAATTCGCTGTTTGCTTTGG
GTTGGCGATTTTCTACTGATTGGTTGTCTCAACTCTGAAGTAAGTTGTTG
GAAATATAATTCAAAGGTCACCCCGGAGAAAGAAGTGAACAGTGTTCGGA
ATCTGTATACTGTTATTGGTGACCCAGTTGCCTTGGCAACGAATTCGGAT
GAATCCAAATTAGCTTTGGGAACTACAGCAGGATATTTGTATGTTTTCGA
TTTGAAGAAAAATGAAGAATCTTTGGATATTGAAGTTTTTCATTGTAGCC
AGATTCACAAACCCAAGGTGAATAATGATGGCTCCTTCTTGAACATGGAG
ATTTGGAATTTGAGATGGAGTATTGACGACCGTTACATAGCAACGACTTC
TGAAGATCAAACTGCCATCGTTTCAGATTCTTTAACAGGTGAAGTTTTAA
AAACATTGACTGGTCACACCACAGCCGTAACTGACCTCAGTTGGAAACTT
TTAGCCTCTGGAAAACACGTTCTTGCAACATGTGCTGACGACCGAACAGT
CCGCGTATACGATGGATTGACATTTGAACTCATCACTGTTCTTAAAACAG
AACTTGTATATGGTTGGTATACCCTAACTTATATGGAAATCAATGAAAAA
AATGATCGATTATTTGTAACTACGCAAAATGGTTACTTATTGTCATGGGA
CTTGAATTCTTTTGAATTGATTTACTGTGAGAAATTGCATGCTGGATCTA
TTGAAGGAATCGCACTTTCGAAGGATGGACAATCTCTGGTGAAGTTTTAA
AAACATTGACTGGTCACACCACAGCCGTAACTGACCTCAGTTGGAAACTT
TTAGCCTCTGGAAAACACGTTCTTGCAACATGTGCTGACGACCGAACAGT
CCGCGTATACGATGGATTGACATTTGAACTCATCACTGTTCTTAAAACAG
AACTTGTATATGGTTGGTATACCCTAACTTATATGGAAATCAATGAAAAA
AATGATCGATTATTTGTAACTACGCAAAATGGTTACTTATTGTCATGGGA
CTTGAATTCTTTTGAATTGATTTACTGTGAGAAATTGCATGCTGGATCTA
TTGAAGGAATCGCACTTTCGAAGGATGGACAATCTCTG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000392_pilon | genome | sc0000392_pilon:123629..126234 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1522-1869:349 |
| Aaloc | 847-1518:1225 |
| Aaloc | 187-843:2188 |
| Aaloc | 1-183:2607 |
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